Showing 200 of total 357 results (show query)

datawookie

emayili:Send Email Messages

A light, simple tool for sending emails with minimal dependencies.

Maintained by Andrew B. Collier. Last updated 1 months ago.

hacktoberfest

35.3 match 180 stars 9.59 score 95 scripts 3 dependents

jessecambon

tidygeocoder:Geocoding Made Easy

An intuitive interface for getting data from geocoding services.

Maintained by Jesse Cambon. Last updated 4 months ago.

geocodingrspatialtidyverse

12.0 match 287 stars 11.35 score 1.0k scripts 9 dependents

degauss-org

dht:A Collection of Functions to Assist Building DeGAUSS Containers

degauss helper tools are used to develop and run DeGAUSS containers.

Maintained by Erika Rasnick. Last updated 1 years ago.

14.2 match 5 stars 4.51 score 16 scripts

hadley

pryr:Tools for Computing on the Language

Useful tools to pry back the covers of R and understand the language at a deeper level.

Maintained by Hadley Wickham. Last updated 1 years ago.

cpp

3.3 match 204 stars 11.85 score 1.9k scripts 56 dependents

ifellows

wordcloud:Word Clouds

Functionality to create pretty word clouds, visualize differences and similarity between documents, and avoid over-plotting in scatter plots with text.

Maintained by Ian Fellows. Last updated 7 years ago.

cpp

3.4 match 2 stars 10.59 score 6.9k scripts 55 dependents

jl5000

tidyged:Handle GEDCOM Files Using Tidyverse Principles

Create and summarise family tree GEDCOM files using tidy dataframes.

Maintained by Jamie Lendrum. Last updated 3 years ago.

5.6 match 8 stars 5.96 score 23 scripts 3 dependents

fmmattioni

downloadthis:Implement Download Buttons in 'rmarkdown'

Implement download buttons in HTML output from 'rmarkdown' without the need for 'runtime:shiny'.

Maintained by Felipe Mattioni Maturana. Last updated 5 months ago.

3.4 match 146 stars 9.63 score 856 scripts 1 dependents

transportfoundry

censusr:Collect Data from the Census API

Use the US Census API to collect summary data tables for SF1 and ACS datasets at arbitrary geographies.

Maintained by Greg Macfarlane. Last updated 7 years ago.

5.4 match 5 stars 4.95 score 18 scripts

coolbutuseless

c64asm:6502 Assembler

A simple 6502 assembler written purely in R and leveraging R data structures for pre-computing character sets and images.

Maintained by mikefc. Last updated 1 years ago.

12.1 match 3 stars 2.22 score 11 scripts

jlacko

RCzechia:Spatial Objects of the Czech Republic

Administrative regions and other spatial objects of the Czech Republic.

Maintained by Jindra Lacko. Last updated 2 days ago.

czech-republicshapefile

3.9 match 25 stars 6.87 score 85 scripts

wrathematics

getip:'IP' Address 'Lookup'

A micro-package for getting your 'IP' address, either the local/internal or the public/external one. Currently only 'IPv4' addresses are supported.

Maintained by Drew Schmidt. Last updated 1 years ago.

4.2 match 4 stars 4.51 score 11 scripts 3 dependents

r-lib

pingr:Check if a Remote Computer is Up

Check if a remote computer is up. It can either just call the system ping command, or check a specified TCP port.

Maintained by Gábor Csárdi. Last updated 3 months ago.

dnsis-onlinepingtcpglibc

1.8 match 36 stars 10.33 score 114 scripts 24 dependents

coolbutuseless

c64vice:Interface to Binary Monitor in VICE C64 Emulator

Interface to the binary monitor in VICE - the c64 emulator.

Maintained by mikefc. Last updated 1 years ago.

5.6 match 2 stars 2.08 score 12 scripts

bioc

gwascat:representing and modeling data in the EMBL-EBI GWAS catalog

Represent and model data in the EMBL-EBI GWAS catalog.

Maintained by VJ Carey. Last updated 5 months ago.

genetics

1.8 match 6.05 score 110 scripts 2 dependents

frbcesab

rutils:A Collection of R Functions

A collection of R functions commonly used in FRB-CESAB projects.

Maintained by Nicolas Casajus. Last updated 2 months ago.

miscellaneous

1.9 match 2 stars 4.66 score 454 scripts

skranz

gtree:gtree basic functionality to model and solve games

gtree basic functionality to model and solve games

Maintained by Sebastian Kranz. Last updated 4 years ago.

economic-experimentseconomicsgambitgame-theorynash-equilibrium

2.3 match 18 stars 3.79 score 23 scripts 1 dependents

frederikziebell

RNAseqQC:Quality Control for RNA-Seq Data

Functions for semi-automated quality control of bulk RNA-seq data.

Maintained by Frederik Ziebell. Last updated 8 months ago.

1.5 match 2 stars 5.21 score 27 scripts

elipousson

getdata:Get Easy Access to Tabular and Spatial Data

Download and format spatial and non-spatial data with simple filtering by location.

Maintained by Eli Pousson. Last updated 5 months ago.

rspatial

1.7 match 12 stars 4.46 score 18 scripts 3 dependents

eltebioinformatics

mulea:Enrichment Analysis Using Multiple Ontologies and False Discovery Rate

Background - Traditional gene set enrichment analyses are typically limited to a few ontologies and do not account for the interdependence of gene sets or terms, resulting in overcorrected p-values. To address these challenges, we introduce mulea, an R package offering comprehensive overrepresentation and functional enrichment analysis. Results - mulea employs a progressive empirical false discovery rate (eFDR) method, specifically designed for interconnected biological data, to accurately identify significant terms within diverse ontologies. mulea expands beyond traditional tools by incorporating a wide range of ontologies, encompassing Gene Ontology, pathways, regulatory elements, genomic locations, and protein domains. This flexibility enables researchers to tailor enrichment analysis to their specific questions, such as identifying enriched transcriptional regulators in gene expression data or overrepresented protein domains in protein sets. To facilitate seamless analysis, mulea provides gene sets (in standardised GMT format) for 27 model organisms, covering 22 ontology types from 16 databases and various identifiers resulting in almost 900 files. Additionally, the muleaData ExperimentData Bioconductor package simplifies access to these pre-defined ontologies. Finally, mulea's architecture allows for easy integration of user-defined ontologies, or GMT files from external sources (e.g., MSigDB or Enrichr), expanding its applicability across diverse research areas. Conclusions - mulea is distributed as a CRAN R package. It offers researchers a powerful and flexible toolkit for functional enrichment analysis, addressing limitations of traditional tools with its progressive eFDR and by supporting a variety of ontologies. Overall, mulea fosters the exploration of diverse biological questions across various model organisms.

Maintained by Tamas Stirling. Last updated 3 months ago.

annotationdifferentialexpressiongeneexpressiongenesetenrichmentgographandnetworkmultiplecomparisonpathwaysreactomesoftwaretranscriptionvisualizationenrichmentenrichment-analysisfunctional-enrichment-analysisgene-set-enrichmentontologiestranscriptomicscpp

0.8 match 28 stars 7.36 score 34 scripts

maverickg

cxxfunplus:extend cxxfunction by saving the dynamic shared objects

extend cxxfunction by saving the dynamic shared objects for reusing across R sessions

Maintained by Jiqiang Guo. Last updated 2 years ago.

1.7 match 3.18 score 5 scripts 1 dependents

jimbrig

jimstools:Tools for R

What the package does (one paragraph).

Maintained by Jimmy Briggs. Last updated 3 years ago.

functionspersonalutility

1.8 match 2 stars 3.00 score 2 scripts

ropengov

digitransit:A client for digitransit API services

Geocode and reverse geocode addresses and poinst in Finland.

Maintained by Markus Kainu. Last updated 11 months ago.

ropengov

2.5 match 1.70 score

itsarthurwhite

BayesLCA:Bayesian Latent Class Analysis

Bayesian Latent Class Analysis using several different methods.

Maintained by Arthur White. Last updated 5 years ago.

1.6 match 2 stars 2.48 score 38 scripts

eric-hunt

htce:A set of internal tools for managing high-throughput assay data at NEB

What the package does (one paragraph).

Maintained by Eric Hunt. Last updated 9 months ago.

3.7 match 1.00 score