LibraryDescriptionDebian (Headers)Used by R packages
abseilExtensions to the C++ standard librarylibabsl-dev
bigrquerystorage bigrquerystorage
alsa-libShared library for ALSA applicationslibasound2-dev
harmonium
apparmorChangehat AppArmor librarylibapparmor-dev
RAppArmor RAppArmor unix unix
arpackFortran77 subroutines to solve large scale eigenvalue problemslibarpack2-dev
speakeasyR speakeasyR
bzip2High-quality block-sorting file compressor library libbz2-dev
bamsignals csaw deepSNV DiffBind diffHic epialleleR FLAMES GMMAT GMMAT h5vc jackalope jackalope maftools maftools methylKit mitoClone2 podkat QuasR raer Rhtslib Rsamtools scPipe seqminer seqminer TransView VariantAnnotation vcfppR vcfppR
c-bloscHigh performance meta-compressor optimized for binary datalibblosc-dev
Rarr Rarr
cairoCairo 2D vector graphics librarylibcairo2-dev
Cairo Cairo gdtools gdtools rsvg rsvg unigd unigd
clpCoin-or linear programming solver coinor-libclp-dev
pcaL1 rcbc
coinor-cbcCoin-or branch-and-cut mixed integer programming solver coinor-libcbc-dev
rcbc
coinor-symphonyCOIN-OR solver for mixed-integer linear programs coinor-libsymphony-dev
lpsymphony Rsymphony Rsymphony
coinutilsCOIN-OR collection of utility classes coinor-libcoinutils-dev
rcbc
curlEasy-to-use client-side URL transfer library libcurl4-openssl-dev
arrow arrow bamsignals csaw curl curl deepSNV DiffBind diffHic epialleleR FLAMES h5vc HDF5Array jackalope jackalope maftools maftools methylKit mitoClone2 podkat QuasR raer RCurl rhdf5 rhdf5 Rhtslib Rsamtools rtracklayer scPipe strawr strawr TransView VariantAnnotation vcfppR vcfppR
cyrus-sasl2Cyrus SASL authentication abstraction librarylibsasl2-dev
mongolite mongolite
ffmpegFFmpeg library containing media filters libavfilter-dev
av av
fftw3Library for computing Fast Fourier Transforms libfftw3-dev
bioacoustics bioacoustics cartogramR diversitree diversitree fftw fftwtools fftwtools image.CannyEdges image.CannyEdges imager imager KSgeneral MFPCA MFPCA poisbinom poisbinom PoissonBinomial PoissonBinomial PoissonMultinomial qqconf qqconf ravetools ravetools Rssa Rssa spate spate specklestar spFW SuperGauss SuperGauss
fluidsynthReal-time MIDI software synthesizer libfluidsynth-dev
fluidsynth fluidsynth
fontconfigGeneric font configuration library libfontconfig-dev
devEMF devEMF systemfonts systemfonts
fortranRuntime library for GNU Fortran applicationsbain bain basicspace BayesFM bayesQR bayesQR BFpack BFpack BFpack bgw bsamGP BTSR caRamel caRamel catch causalSLSE cglasso clinfun clinfun clusterCrit clusterCrit clusterCrit CohensdpLibrary CohensdpLibrary coxphf coxphf coxphw coxphw crimCV DAISIE DAISIE dBlockmodeling DCCA Delaporte Delaporte deSolve deSolve dfsaneacc dglars DirStats DirStats DMMF DNAcopy dsdp dsdp dtrSurv DynamicGP DynamicGP DySS EcoNetGen EcoNetGen EpiILMCT EpiILMCT eRm extremis facets FAS FAS fastcox fastcox fastkqr frailtypack frontier frontier gcdnet gcdnet GeneSelectMMD geoBayes gglasso gglasso glasso glinvci glinvci glmnet gmm gmm groupTesting growth growth grpnet gslnls gslnls HDtweedie Hmisc Hmisc iClusterPlus islasso JLPM JLPM KERE kerndwd KFAS KFAS ktweedie ktweedie lbfgsb3c lbfgsb3c lcmm lcmm limSolve LMest localgauss lorec LWFBrook90R LWFBrook90R mcr mcrPioda mcrPioda midasml midasml momentfit momentfit mpath mpath mpmi mpmi mra MSCMT multimode multitaper multitaper MultNonParam Nmix NormPsy NormPsy npregfast npregfast npROCRegression npsp npsp NScluster numOSL NuPoP oc oc oscar oscar PEcAn.BASGRA prefmod PropClust PRTree PWEALL qgg qgg r3PG r3PG RaschSampler RefBasedMI RefBasedMI restrend RGN RGN rmumps rmumps RobustAFT rrelaxiv rsae rsae rsofun rsofun SALES SALES seq2R seq2R sequoia sequoia slp sm SmoothHazard smwrQW sparsegl sparsegl sparsenet svd svd swdpwr SynExtend TensorClustering tmvtnorm tmvtnorm transfR TreeSim trend tripack tseriesEntropy tseriesEntropy tseriesTARMA TSSS TULIP twdtw twdtw VCA vegan vegan WLreg wnominate wsbackfit
freetypeFreeType 2 font enginelibfreetype-dev
Cairo Cairo devEMF devEMF gdtools gdtools ragg ragg rgl rgl showtext showtext sysfonts sysfonts systemfonts systemfonts textshaping textshaping
fribidiFree Implementation of the Unicode BiDi algorithmlibfribidi-dev
textshaping textshaping
gdalGeospatial Data Abstraction Librarylibgdal-dev
gdalBindings gdalcubes gdalcubes gdalraster gdalraster ICESat2VegR lasR prepr rgdal rGEDIsimulator sf sf terra terra vapour vapour
geosGeometry engine for Geographic Information Systems libgeos-dev
apcf apcf exactextractr exactextractr lwgeom lwgeom rgeos sf sf terra terra
glibGLib library of C routineslibglib2.0-dev
keyring keyring RcppCWB RcppCWB Rpoppler rsvg rsvg
glibcGNU C Library: Shared librarieslibc6-dev
bgx GeoModels GeoModels gslnls gslnls IAPWS95 IAPWS95 mongolite mongolite PEcAn.BASGRA pingr pingr r3PG r3PG SAPP SPECIES
glpkLinear programming kit with integer (MIP) supportlibglpk-dev
glpkAPI igraph igraph leidenbase leidenbase rDEA rDEA Rglpk Rglpk sdcTable
gmpMultiprecision arithmetic librarylibgmp-dev
arrangements arrangements corels corels FLSSS GeoFIS gmp hypergeo2 hypergeo2 interpolation interpolation jack jack prepr qspray qspray RationalMatrix RationalMatrix ratioOfQsprays ratioOfQsprays rcdd RcppAlgos RcppAlgos RcppBigIntAlgos RcppBigIntAlgos resultant resultant Rmpfr Rmpfr sbrl sphereTessellation sphereTessellation surveyvoi symbolicQspray symbolicQspray symengine symengine TDA
gpgmeGPGME - GnuPG Made Easy libgpgme-dev
gpg gpg
grpcHigh performance general RPC frameworklibgrpc++-dev
libgrpc-dev
bigrquerystorage bigrquerystorage
gslGNU Scientific Library (GSL) libgsl-dev
abn abn AMOUNTAIN BayesVarSel BayesVarSel bbl BNSP catSurv catSurv ccfindR cit cit CLVTools CLVTools coga coga DirichletMultinomial DirichletMultinomial diversitree diversitree dynr eaf eaf econetwork excursions excursions fingerPro flan flan flowPeaks frailtyMMpen frailtyMMpen fRLR fRLR GeneralizedWendland GLAD GPBayes GPBayes gsl gsl gslnls gslnls GWmodel3 hgwrr hgwrr hSDM hSDM iBMQ immunoClust island jSDM jSDM landsepi LCMCR Libra libstable4u libstable4u lnmixsurv lnmixsurv markets mashr mashr mBvs mcrPioda mixcat mixture mmpca mmpca monoreg mvabund mvabund mvst PEPBVS PICS PING psbcGroup QF rcontroll rcontroll RcppGSL RcppGSL RcppZiggurat RcppZiggurat RDieHarder RDieHarder rGEDIsimulator ridge ridge RJMCMCNucleosomes RKHSMetaMod Rlibeemd Rlibeemd rnetcarto rnetcarto rtmpt rtmpt sbrl SemiCompRisks shrinkTVP SimInf SimInf simplexreg smam smam spaMM SPARSEMODr SPARSEMODr stpphawkes survSNP SymTS topicmodels VBLPCM vol2birdR vol2birdR
harfbuzzOpenType text shaping engine libharfbuzz-dev
Cairo Cairo textshaping textshaping
hdf5HDF5 High Level runtime files - serial versionlibhdf5-dev
BPCells hdf5r hdf5r RcppPlanc rGEDIsimulator vol2birdR vol2birdR
hiredisMinimalistic C client library for Redislibhiredis-dev
heartbeatr RcppRedis RcppRedis redux redux
hwlocHierarchical view of the machine libhwloc-dev
RcppPlanc
icuInternational Components for Unicodelibicu-dev
Cairo Cairo stringi stringi
imagemagickImage manipulation library libmagick++-6.q16-dev
libmagickwand-6.q16-dev
libmagickcore-6.q16-dev
magick magick
jagsJust Another Gibbs Sampler for Bayesian MCMC jags
abmR abn abn afthd agRee altmeta ArchaeoChron auRoc BACCT bacistool baker baker bamdit BANOVA banter banter basksim basksim BayesCACE bayescount bayescount BayesGWQS BayesianMediationA bayesmix bayesMRM BayesOrdDesign BayesPostEst BayesPostEst BayesRS BayesRS BayesTwin BayesTwin BayLum BayLum BCHM bdribs beaver beaver beer BEND BEND BeQut bfw bfw bhmbasket bipd bipd blrm bnma bnma boral bsam bsam BTSPAS BTSPAS CCTpack CNVrd2 COMBO COMBO cosimmr cosimmr crmPack crmPack crmPack crossnma crossnma crputils CRTspat CRTspat CruzPlot CruzPlot dclone dclone dcmle dcmle DM doublIn doublIn dreamer dreamer EBASE EBASE EcoDiet EcoDiet eefAnalytics eefAnalytics eivtools eivtools eoa3 ern eSIR ewoc ewoc EWOC.Comb gbs2ploidy gconsensus gemtc gemtc gemtcPlus glossa glossa groupWQS handwriter handwriter handwriterApp handwriterApp handwriterRF handwriterRF hbbr hdbma HDSpatialScan HETOP HETOP HiLDA historicalborrow IIVpredictor infercnv IsotopeR isoWater jagshelper jagshelper jagstargets jagstargets JAGStree JAGStree jagsUI jagsUI jarbes JMbayes JMbayes jmbr JointAI JointAI lcra lcra lira longit MADSEQ MBNMAdose MBNMAdose MBNMAdose MBNMAtime MBNMAtime MBNMAtime mbpp mcmsupply mcmsupply mcp mcp midas2 midas2 MigConnectivity MigConnectivity miscF missingHE missingHE MixSIAR MixSIAR morse MPTmultiverse MPTmultiverse msaeHB NCC NCC neojags neojags nichetools nichetools NMADiagT NobBS NobBS occumb occumb optimalThreshold ordinalbayes ordinalbayes ordinalRR pcnetmeta PEcAn.all PEcAn.assim.batch PEcAn.BIOCRO PEcAn.data.land PEcAn.ED2 PEcAn.LDNDC PEcAn.LINKAGES PEcAn.MA PEcAn.photosynthesis PEcAn.priors PEcAn.SIPNET PEcAn.uncertainty PEcAn.workflow PEcAnAssimSequential PEcAnRTM Petersen Petersen pexm pexm phase1PRMD phase1PRMD phase1RMD phase1RMD phenoCDM pivmet pivmet popbayes popbayes PottsUtils prevalence prevalence psborrow psborrow PVAClone PVAClone R2jags R2jags RcmdrPlugin.RMTCJags remiod remiod reslr reslr rfPermute rfPermute rjags rnmamod rnmamod RoBMA RoBMA RoBSA RoBSA RobustBayesianCopas runjags saeHB saeHB.ME saeHB.ME.beta saeHB.ME.beta saeHB.panel saeHB.panel saeHB.panel.beta saeHB.panel.beta saeHB.spatial saeHB.spatial saeHB.twofold saeHB.twofold saeHB.unit saeHB.unit saeHB.ZIB SAME scDECO scDECO selectKSigs SeqFeatR sharx sharx SIBER SIBER simmr simmr snSMART snSMART sprex sprex ssifs ssifs strataG SurviMChd swfscAirDAS swfscAirDAS swfscDAS swfscDAS swfscMisc swfscMisc TreeBUGS TreeBUGS tRophicPosition UHM UHM unmconf vICC vICC zoib
jqLightweight and flexible command-line JSON processor libjq-dev
jqr jqr
libarchiveMulti-format archive and compression library libarchive-dev
archive archive
libdeflateFast, whole-buffer DEFLATE-based compression and decompressionlibdeflate-dev
GMMAT GMMAT MAGEE MAGEE pgenlibr
libgit2Low-level Git librarylibgit2-dev
gert gert git2r git2r
libgluMesa OpenGL utility library libglu1-mesa-dev
lidRviewer rgl rgl
libglvndVendor neutral GL dispatch library libgl-dev
lidRviewer rgl rgl
libjpeg-turboLibjpeg-turbo JPEG runtime librarylibjpeg-turbo8-dev
Cairo Cairo jpeg jpeg qpdf qpdf ragg ragg
libopenmptModule music library based on OpenMPT libopenmpt-dev
openmpt
libpngPNG library libpng-dev
ggiraph ggiraph png png ragg ragg rgl rgl rvg rvg svglite svglite unigd unigd vdiffr vdiffr
librsvgSAX-based renderer library for SVG files librsvg2-dev
rsvg rsvg
libsbmlSystem Biology Markup Language librarylibsbml5-dev
NetPathMiner rsbml
libsdl2Simple DirectMedia Layerlibsdl2-dev
fluidsynth fluidsynth lidRviewer
libsecretSecret storelibsecret-1-dev
keyring keyring
libsodiumNetwork communicationlibsodium-dev
sodium sodium
libsshTiny C SSH library libssh-dev
ssh ssh
libunwindLibrary to determine the call-chain of a program libunwind-dev
winch winch
libuv1Asynchronous event notification library libuv1-dev
httpuv httpuv httpuv
libwebpLossy compression of digital photographic imageslibwebp-dev
webp webp
libx11X11 client-side librarylibx11-dev
Cairo Cairo imager imager rayrender rayrender rgl rgl tkrplot
libxcryptLibcrypt shared librarylibcrypt-dev
Rserve Rserve
libxml2GNOME XML librarylibxml2-dev
CytoML igraph igraph leidenbase leidenbase NetPathMiner XBRL XML xml2 xml2 xslt xslt
libxsltXSLT 1.0 processing library libxslt1-dev
xslt xslt
libzstdFast lossless compression algorithmlibzstd-dev
fstcore GMMAT GMMAT MAGEE MAGEE pgenlibr qs qs qs Rarr Rarr seqminer seqminer
lz4Fast LZ compression algorithm library liblz4-dev
arrow fstcore qs qs qs
mbedtlsLightweight crypto and SSL/TLS library libmbedtls-dev
nanonext nanonext
mecabLibraries of Mecablibmecab-dev
RcppMeCab RcppMeCab RMeCab
mpfr4Multiple precision floating-point computationlibmpfr-dev
GeoFIS hypergeo2 hypergeo2 multibridge multibridge Rmpfr Rmpfr scModels surveyvoi symengine symengine
mysqlMySQL database client librarylibmysqlclient-dev
RMariaDB RMariaDB RMySQL RMySQL
netcdfInterface for scientific data access to large binary datalibnetcdf-dev
gdalcubes gdalcubes ncapi ncdf4 RNetCDF RNetCDF
nngLightweight Messaging Library libnng-dev
nanonext nanonext
nodejsEvented I/O for V8 javascript libnode-dev
V8 V8
ocl-icdGeneric OpenCL ICD Loaderocl-icd-opencl-dev
gpuMagic
onetbbParallelism library for C++ libtbb-dev
markets proxyC proxyC quanteda quanteda quanteda.textstats seededlda seededlda
openbabelChemical toolbox librarylibopenbabel-dev
ChemmineOB
openblasOptimized BLAS abclass abclass abctools abctools abn abn acc acebayes ACEt ACEt ACSSpack actuar adaHuber adaHuber ADAPT adaptivetau adaptivetau ade4 ade4 ade4 adespatial adespatial adimpro adlift admixtools ADMM ADMM ADMMsigma ADMMsigma affyPLM aftgee aftgee aftsem aftsem ahaz ahMLE aihuman aihuman AllelicSeries AllelicSeries alpaca alpaca AlphaSimR AlphaSimR alqrfe Amelia anclik anMC anMC ANN2 ANN2 anominate AntMAN AntMAN aorsf aorsf ape ape apollo ARCensReg ARCensReg ARCokrig ARCokrig arfima arfima arrApply arrApply asmbPLS asmbPLS assist ASV ATNr autoRasch Avionic24 aws BalancedSampling BalancedSampling bama bama bamlss bamp bamp BANDITS bandle bark bark BAS BAS BASiCS basicspace baskexact baskexact BASSLINE batchmix batchmix Bayenet Bayenet BayesComm BayesComm bayescopulareg bayescopulareg bayesCureRateModel BayesDLMfMRI bayesDP bayesDP bayesEO bayesEO BayesFM bayesianVARs bayesianVARs bayeslm bayeslm bayesm BayesMallows BayesMallows BayesPPD BayesPPDSurv bayesQR bayesQR Bayesrel Bayesrel BayesReversePLLH BayesRGMM BayesSpace BayesSUR BayesSUR bayesSurv BayesSurvive bayesWatch bayesWatch baygel baygel bayMDS bayou BCClong BCClong BCEE bcf bcf BClustLonG bcROCsurface bcROCsurface BCSub bcv bcv BDgraph BEKKs betaBayes beyondWhittle BFpack BFpack BGGM BGGM BGLR BGVAR BGVAR BHMSMAfMRI BHMSMAfMRI BHSBVAR biClassify bife bife BIFIEsurvey BIFIEsurvey bigalgebra bigalgebra bigergm bigGP bigMap bigReg bigReg bigsnpr bigsnpr bigstatsr bigstatsr bigtime bigtime BigVAR BigVAR binaryGP binGroup2 biosensors.usc biosensors.usc blatent blatent Blend Blend bliss bliss blockmodels blockmodels BLPestimatoR bmabasket bmabasket bnlearn BNPmix BoltzMM BoltzMM bonsaiforest bootCT bootUR bootUR BOSSreg bpgmm bpnreg bpnreg bpr BPRMeth bqtl BradleyTerryScalable BranchGLM BranchGLM BRISC brmsmargins brmsmargins brnn bsamGP BSPBSS BSPBSS bspline bspline bssm bssm BSSprep bsvars bsvars bsvarSIGNs bsvarSIGNs BTLLasso BTSR BTtest BTtest Buddle bvarsv bvarsv bvartools bvartools BVSNLP CAESAR.Suite CAESAR.Suite carat causalSLSE causl ccaPP ccaPP cccp ccImpute cda CDatanet CDatanet CEC CEC CelliD cellWise CERFIT CERFIT cglasso cglm changepoints changepoints chngpt chngpt CholWishart CholWishart cinterpolate cinterpolate circlus CircSpaceTime CircSpaceTime circumplex circumplex cIRT cIRT clarabel clarabel clubpro clubpro ClusPred clusterCrit clusterCrit clusterCrit clusterMI ClusterR ClusterR ClusVis CLVTools CLVTools cmfilter cmfrec cmfrec CMGFM CMGFM COAP COAP coda.base coda.base colorednoise colorednoise combinIT combinIT COMIX communication complex complex compositions coneproj conleyreg conleyreg conos conos conos conquer conquer ContaminatedMixt CoOL coop coop copCAR corrcoverage cosimmr cosimmr Countr Countr covdepGE covdepGE covglasso CovRegRF covTestR covTestR CovTools CovTools CoxPlus coxrt coxrt cPCG CPE CPGLIB CPGLIB cplm cplm cpr cpr cpss cpss cqrReg crandep crandep crawl crawl crimCV Crossover Crossover ctmcd cTMed cTMed CVR CytoML cytosignal CytoSimplex CytoSimplex dann dann DatabionicSwarm DatabionicSwarm DatAssim dateutils dateutils DCCA dccmidas dccpp dccpp dcov DCSmooth dcurver dcurver deBif deBif deepgp deforestable deform DegNorm demu densEstBayes densityratio DepthProc DepthProc deseats DESeq2 desla desla deSolve deSolve dfms dfms dfphase1 dglars DGM DGM DGP4LCF DGP4LCF diagis diagis didimputation DifferentialRegulation DIFM dina dina distinct diversitree diversitree dlm dmbc dmbc DMQ DoseFinding DoseFinding DOVE DR.SC DR.SC drclust drgee DriftBurstHypothesis DriftBurstHypothesis DRIP DRIP dsdp dsdp DSSP DSSP DstarM DstarM DSWE DSWE dti dtwclust dtwclust DynamicGP DynamicGP dynaTree dynmix dynmix DySS Eagle earth earthtide ebdbNet ebdbNet EBEN EBglmnet EBglmnet eBsc eBsc ebTobit ebTobit echoice2 echoice2 ecodist ecodist economiccomplexity edgeR edina edina eDMA eegUtils EFAfactors EFAtools EFAtools eha eha eigen1 eimpute elmNNRcpp elmNNRcpp em em emBayes EMCluster EMCluster EMgaussian EMgaussian emIRT emIRT EMMIXgene empichar empichar endorse endorse epigraHMM EpiLPS EpiLPS epistasisGA equateMultiple EquiTrends EquiTrends ergmito ergmito errum errum esaddle esaddle esemifar esreg esreg estimateW etm etm eulerr eulerr evgam evgam evinf evinf evolqg evolqg ExhaustiveSearch ExhaustiveSearch experiment experiment expm expm expQ2 ExtremalDep ExtremalDep exuber exuber fabMix factorstochvol factorstochvol fad fad fanc FarmSelect FarmSelect FarmTest FarmTest fastadi fastadi FastBandChol fastcpd fastcpd fasterElasticNet fasterElasticNet fastGHQuad fastGHQuad fastGLCM fastGLCM fastglmpca fastglmpca fastICA fastkqr fastliu fastM fastmatrix fastmatrix fastPLS FastSF fastTopics fastTopics FBFsearch fclust fctbases fctbases fdacluster fdacluster fdaMixed fdaMixed fdaSP fdasrvf fdasrvf fdesigns fDMA fDMA fect FGLMtrunc fICA filling filling FKF FKF FKF.SP FKF.SP flamingos flamingos FlexVarJM FlexVarJM float float FLORAL FLORAL flowWorkspace FMCCSD fmerPack fmf fmri forecast forecast fourierin fourierin fourPNO fourPNO fracdiff fracdiff FRASER FRESA.CAD FRESA.CAD FRESHD FRESHD funcharts funcharts FuzzySimRes FuzzySimRes fwildclusterboot GADAG gam gamsel gamselBayes GAS gaselect gaselect gasper gasper GauPro GauPro gcKrig gclm gclm GCPBayes GCPBayes GCSM GCSM GDINA GDINA gdpc gdpc gee GEEaSPU geigen geiger geiger GenSA geoBayes geocomplexity geocomplexity GeoDiff geoFKF geoFKF geoFourierFDA geoFourierFDA GeoModels GeoModels geostatsp gfiExtremes gfiExtremes GFM GFM ggdmc ggdmc GGMncv GGMncv GGMselect GGPA ggsc gigg gigg gjam glamlasso glamlasso Glarmadillo glcm glcm GLCMTextures GLCMTextures glinvci glinvci GLMaSPU GLMaSPU glmGamPoi glmm glmmEP glmmML GMCM GMCM GMKMcharlie gmm gmm GMMAT GMMAT gmtFD gmvjoint gmvjoint gMWT gMWT gnm gnm gofar gofar goffda goffda GofKmt goldfish goldfish GPCMlasso gpcp GPFDA GpGp GpGp GPM gps gps GPvam GPvecchia graper graphicalEvidence graphicalVAR gRbase gRbase greed greed GreedyEPL GRENITS gridOT gRim gRim grove growfunctions grpsel grpsel GSE gss gstat gstat gsynth GWASinlps GWASinlps GWmodel GWmodel3 GxEScanR harmony harmony hawkes hdbcp hdbcp hdbm hdflex hdflex HDJM hdnom hdnom HDNRA HDNRA hdpGLM hdpGLM HDSpatialScan HDTD HDtweedie hgm hgwrr hgwrr hibayes hibayes HiDimDA HiGarrote highfrequency highfrequency higlasso HistDAWass HistDAWass hitandrun hitandrun hkevp hkevp HLMdiag HLMdiag HMB hmcdm hmcdm HMMEsolver hpa HSAR HTLR HTLR hypervolume hypervolume iapws iAR ibr iccbeta iccbeta iClusterPlus iClusterVB iClusterVB ICSClust ICSClust ICtest idefix idefix iDOVE IFP igraph igraph ILSE ILSE imbalance imbalance inca inferCSN inferCSN infinitefactor INLAspacetime INLAspacetime interep interflex intkrige intkrige intrinsicFRP intrinsicFRP intsurv intsurv ipfp ipfp irlba irlba islasso ivdoctr ivdoctr ivsacim ivx ivx jackalope jackalope JANE JANE JFM JMbayes JMbayes JMbayes2 JMbayes2 jmcm joineRML joineRML jointDiag jointDiag jrSiCKLSNMF jSDM jSDM kalmanfilter kazaam kdecopula kdecopula kerndwd KernelKnn KernelKnn kernlab KernSmooth KFAS KFAS kimfilter KODAMA KODAMA KoulMde krige kyotil kyotil l0ara L0Learn L0Learn l1spectral LA laGP LAM LAM LaMa LaMa lamle Langevin LassoGEE LassoGEE latentgraph latentnet latentnet lavacreg lavacreg lavaSearch2 lavaSearch2 lddmm ldsep ldsep ldsr ldsr ldt LEA lefko3 legion legion leidenbase leidenbase lemur leptokurticMixture lessSEM lessSEM lfa lfe lfe libcoin lidR lidR LikertMakeR LikertMakeR limSolve linconGaussR linconGaussR linelistBayes linelistBayes list list lit lit ljr lm.br LMest Lmoments lmSubsets lmSubsets lnmixsurv lnmixsurv localgauss lodr LogConcDEAD logconcens logspline longclust LongMemoryTS LongMemoryTS lorec lotri lotri lowmemtkmeans lowmemtkmeans lowpassFilter LowRankQP lpirfs lpirfs lpSolveAPI lqmm lsirm12pl ltsk ltsspca ltsspca ludic ludic luna lvmcomp lvmcomp MABOUST MAGEE MAGEE magi magree MAINT.Data malan malan manifold ManifoldOptim ManlyMix maotai maotai mapfit mapfit MAPITR MAPITR maptpx maptpx marble marble markerpen markerpen markophylo markovchain markovchain mashr mashr mastif MAT matchingMarkets matchingMarkets Matrix Matrix MatrixCorrelation MatrixCorrelation matrixdist matrixdist MatrixExtra MatrixExtra MatrixLDA MatrixLDA MAVE mboost mboost mccca mcemGLM mclust MCMCprecision MCMCprecision mcmcse mcmcse MDEI MDEI mdgc mdgc mdmb mdmb MendelianRandomization MendelianRandomization meshed meshed MESS MESS metafolio metafolio MetaHD metapack metapack metaRange metaRange meteorits meteorits mets mets mev mev mgcv MGMM MGMM miceadds miceadds miceFast miceFast microsimulation microsimulation mig mig miloR milr milr minimaxApprox minimaxApprox miniPCH miniPCH minpack.lm mirt mirt mirtCAT mirtCAT mirtjml mirtjml MiSPU MiSPU MissCP missoNet missoNet mixAK mixedBayes mixedBayes mixedCCA mixedCCA mixedMem mixedMem MixMatrix MixMatrix MixSim MixSim mixsqp mixsqp mixture MLEcens mlegp mlegp MLModelSelection mlpack mlrv mmcif mmcif MMGFM MMGFM mmsample MMVBVS MMVBVS MNARclust mnorm MNP MNP modeLLtest modeLLtest modsem modsem mombf mombf momentfit momentfit momentuHMM momentuHMM MomTrunc MomTrunc monomvn Morpho Morpho moveHMM moveHMM moveMMPP mp mp mpath mpath MR.Corr2 MR.CUE MR.LDP MR.RGM MR.RGM MRAID mrfDepth mrfDepth mrgsolve mrgsolve MrMediation MRPATH MSCMT MSGARCH msgps MSIMST MSIMST msm MSstats MSTest MSTest MTLR MTLR multAbund multbxxc MultiCOAP MultiCOAP multilevLCA multilink multilink multinomineq multinomineq MultiscaleDTM MultiscaleDTM multitaper multitaper multivar multivar MultNonParam MultOrdRS MultOrdRS MultSurvTests MultSurvTests mutualinf mvMAPIT mvMAPIT mvMORPH mvMORPH MVMRcML mvnfast mvtnorm mvtnorm n1qn1 n1qn1 navigation navigation nbfar nbfar ncpen ncpen netClust netcmc netcontrol netdiffuseR netdiffuseR NetMix NetMix NetPathMiner netrankr netrankr NetRep NetRep NetworkDistance NetworkDistance nevada nevada ngspatial nimble nleqslv nlmixr2est nlmixr2est nlmixr2extra nlmixr2extra nlmm nlmm nlsur nonlinearTseries nonlinearTseries nonneg.cg nonneg.cg nonprobsvy nonprobsvy NPCirc NPflow NPflow nprobust npsp npsp o2plsda o2plsda oc oc oeli oeli oem oem ohoegdm ohoegdm onlineforecast onlinePCA OpenImageR OpenImageR OPSR OPSR optmatch optmatch orthoDr orthoDr OSFD OutcomeWeights OutcomeWeights OUTRIDER pacotest pacotest PAGFL PAGFL pagoda2 pagoda2 parallelDist parallelDist parglm parglm pARI pARI parma parma PartialNetwork PartialNetwork partition partition party party pcaL1 pcalg pcalg pcaPP pcaPP PCMBaseCpp PCMBaseCpp PCMRS pda pdSpecEst pdSpecEst pecora penAFT penalized PenCoxFrail penPHcure penPHcure pense pense PEPBVS pgee.mixed pgee.mixed pgKDEsphere pgmm pgsc pgsc phangorn phangorn phangorn PhaseType PhaseType phenofit phenofit PHSMM PhylogeneticEM PhylogeneticEM phylosignal phylosignal phyr phyr PINSPlus PJFM planar pleiotest pleiotest PLFD PLFD plgp pliman pliman PLNmodels PLNmodels PLSiMCpp pmartR pmartR poismf poismf polspline polyapost POMaSPU pomp pomp popPCR popPCR porridge PPCI PPforest PPforest ppgmmga ppgmmga PPMR PPMR pprof PPSFS PPSFS PPtreeregViz PPtreeregViz PQLseq pqrBayes pqrBayes pqrfe PRDA PRDA PRECAST predkmeans predkmeans preprocessCore PRIMME probe probe ProFAST ProFAST profoc profoc projpred projpred pRoloc prospectr prospectr prototest proxyC proxyC PRTree psbcSpeedUp psbcSpeedUp psd psd PSGD psgp psqn psqn psychonetrics psychonetrics puniform puniform pyinit pyinit qbld qch qcluster qfa qgg qgg qif qif qpgraph QR qris qris qtl qtl qtlpoly qtlpoly QTLRel quadprog quadrupen quadrupen quanteda.textmodels quanteda.textmodels quantreg QuantRegGLasso QuantRegGLasso QZ QZ Racmacs Racmacs rags2ridges rags2ridges ramcmc ramcmc RandomFields RandomFieldsUtils RandomFieldsUtils RandomForestsGLS rare rare ratematrix ratematrix rbridge RcppArmadillo RcppArmadillo RcppBlaze RcppBlaze RcppCensSpatial RcppCensSpatial RcppDist RcppDist RcppEigen RcppEigen RcppEnsmallen RcppEnsmallen RcppHMM RcppKalman RcppPlanc RcppSMC RcppSMC Rcsdp Rcsdp Rdimtools Rdimtools rdist rdist Rdsdp ReAD RealVAMS redist redist redistmetrics redistmetrics rEDM registr registr regmed regmhmm regmhmm regnet regnet regsem regsem relliptical relliptical remstimate remstimate rENA repolr reReg reReg resemble resemble reservr reservr resourcecode resourcecode revdbayes revdbayes revealedPrefs rexpokit rexpokit Rfast Rfast Rfast2 Rfast2 RFCCA Rforestry Rforestry ridgetorus ridgetorus Riemann Riemann RiemBase RiemBase riskRegression riskRegression RJcluster rliger rliger Rlinsolve Rlinsolve RLT RLumModel RLumModel rmarchingcubes rmarchingcubes RMFM RMFM rmgarch rmgarch rmi Rmodule RMSS RMSS rmumps rmumps rMVP rMVP Rnanoflann RNOmni RNOmni roben roben RoBMA RoBMA roboBayes robregcc robregcc RobStatTM RobStatTM robStepSplitReg robStepSplitReg robsurvey robsurvey robust robust robustarima robustarima robustbase robustbase robustBLME robustBLME robustcov robustcov robustHD robustHD robustlmm robustlmm robustmatrix rofanova rofanova ROI.plugin.qpoases roll roll rolloptim roptim roptim rotations rotations rpeaks Rphylopars Rphylopars rpm rpm rpms rpql RprobitB RprobitB rr rrcov rrcov RRI rrMixture rrpack rrum rrum rsae rsae RSpectra RSpectra rSpectral rSpectral RSSL RSSL RStoolbox RStoolbox rstpm2 rstpm2 rsvddpd rsvddpd RTMB RTMB RTMBp rtrend rtrend Rtsne Rtsne rust rust RWNN RWNN rxode2 rxode2 s2net s2net saeMSPE saeRobust saeRobust SAGMM SAGMM SAIGEgds SAMGEP SAMGEP samplr samplr samurais samurais SANvi SANvi sarima sarima sasfunclust sasfunclust SBmedian SBmedian sbmSDP SBMTrees SBMTrees SC.MEB SC3 ScatterDensity ScatterDensity scde scGPS scINSIGHT scINSIGHT scmap scMitoMut scoringRules scoringRules scran scs scs sctransform scuttle sdetorus sdetorus sdpdth sdsfun sdsfun secure sem semidist semidist sentometrics sentometrics sentopics sentopics seqHMM seqHMM sfcr sfcr SFSI SFSI sgd sgd SGDinference SGDinference sglasso sgolay sgolay sgs sgs shapr shapr ShrinkCovMat ShrinkCovMat shrinkDSM shrinkTVP shrinkTVPVAR SHT SHT Sieve sievePH sievePH signeR SimBIID SimBIID simcdm simcdm SimJoint SIMLR simmr simmr simStateSpace simStateSpace SimSurvNMarker SimSurvNMarker simts simts singR sirt sirt sits sits slalom slam slcm slcm sleev slfm SLOPE SLOPE slp smaa smaa SMMA SMME smmR smooth smooth smoots smurf SNPRelate snpsettest snpsettest SoftBart sommer sommer sorcering sox spAbundance spAbundance SpaCCI SpaceTimeBSS SpaCOAP SpaCOAP spam spam64 SPARK sparseDFM sparsereg sparseSEM sparsevb SpatialBSS SpatialExtremes SpatialExtremes spatialreg spatialreg SpatialTools SpatialTools SpatMCA SpatMCA SpaTopic SpaTopic SpatPCA SpatPCA spBayes spBayesSurv spBFA spBFA spBPS spBPS spc spCP spCP spcr specs spectralGraphTopology spectralGraphTopology spfa spFW sphunif sphunif spikeSlabGAM spikeSlabGAM spinBayes spinBayes splines2 splines2 splmm spMC spnn spnn spNNGP spOccupancy spOccupancy springer springer sprintr sprintr spStack spStack srm srm ssgraph Sshaped SSOSVM SSOSVM sstvars sstvars STAREG starma starma statespacer statespacer statgenGWAS statgenGWAS statgenQTLxT stcos stcos StempCens stepR stepSplitReg stm stm stochQN stochvol stochvol stpm stpphawkes stratEst stratEst strucchangeRcpp strucchangeRcpp sts StuteTest subplex subplex subsampling subsampling SubTite supclust supclust superml superml SuperpixelImageSegmentation SuperpixelImageSegmentation surbayes surbayes SurrogateRegression SurrogateRegression surtvep surtvep survAUC survAUC SurvivalClusteringTree svars svars svd svd SVP switchSelection symmetry symphony synlik synMicrodata T4cluster T4cluster T4transport T4transport tabularMLC tabularMLC TAG TAM TAM TapeS TapeS targeted targeted TauStar TCIU tclust tclust TDAkit TDAkit telefit telefit tensorBSS TestDesign TestDesign tetrascatt tetrascatt textTinyR textTinyR tfarima tfarima tgp tgstat tgstat tidypopgen timereg timereg tlars tlars tlrmvnmvt TMB TMB tmvtnorm tmvtnorm tmvtnsim TPmsm TPmsm TreeBUGS TreeBUGS treenomial treenomial TruncatedNormal TruncatedNormal tsBSS tseries tseriesTARMA tsmarch tsmarch tsPI tsPI tvR tvR ubms ubms ucminf ucminf UComp unmarked unmarked UPCM updog updog UtilityFrailtyPH12 varband varband VARDetect VARSELECTEXPOSURE VarSelLCM VarSelLCM VBJM VCA vcpen vcrpart VeccTMVN VeccTMVN vegan vegan velocyto.R VEwaningVariant VMDecomp VMDecomp vMF vMF volesti walk walker walker waspr waspr watson WaveSampling WaveSampling wbacon wbacon wCorr wCorr wdnet wdnet WeibullR weibulltools weibulltools winsorize womblR womblR WRI wv wv XDNUTS yuima yuima zic ZVCV ZVCV
opencvComputer vision contrlib librarylibopencv-imgcodecs-dev
libopencv-objdetect-dev
libopencv-imgproc-dev
libopencv-photo-dev
libopencv-highgui-dev
libopencv-contrib-dev
libopencv-core-dev
libopencv-video-dev
libopencv-videoio-dev
image.textlinedetector image.textlinedetector opencv opencv
openjdkOpenJDK Java runtime, using Hotspot JIT openjdk-21-jre-headless
Achilles AgroTech AHPWR AntAngioCOOL AQEval AQEval arulesNBMiner arulesNBMiner aslib aslib Avionic24 AWR AWR AWR.Kinesis AWR.Kinesis babette babette bartMachine bartMachineJARs bartMan BASiNET BEACH beastier beastier BeastJar BeastJar bmggum bmggum bnpa boilerpipeR boilerpipeR BridgeDbR CBSr CBSr ccpsyc ChoR CHRONOS CirceR CirceR CohortAlgebra CohortAlgebra CohortExplorer CohortExplorer CohortGenerator CohortGenerator collUtils collUtils CommonDataModel comunicacion ConvertPar ConvertPar corehunter coreNLP Crossover Crossover D2MCS D2MCS d4t4tur daltoolboxdp daltoolboxdp DaMiRseq DatabaseConnector DatabaseConnector DatabaseConnectorJars DatabaseConnectorJars DataClean DataClean DataLoader debCAM DecorateR DecorateR Deducer DeepPINCS denguedatahub denguedatahub dialr dialr dialrjars dialrjars DIDmultiplegt DIDmultiplegtDYN DIscBIO DIscBIO disclosuR disclosuR DIZutils DIZutils DQAgui DQAgui DQAstats DQAstats drawsample drawsample dsa ELT enmSdmX enmSdmX EnsembleBase EnsembleCV EnsemblePCReg EnsemblePenReg eprscope esATAC Eunomia Eunomia EvidenceSynthesis EvidenceSynthesis evoper evoper fastreeR FeatureExtraction FeatureExtraction FishEconProdOutput fsdaR fsdaR FSelector FSelector G2Sd GARS GenProSeq geogenr geogenr GetDFPData GetDFPData ggdemetra ggdemetra ggdemetra3 GGUM GGUM glmulti gMCP gMCP GreedyExperimentalDesign GreedyExperimentalDesign GreedyExperimentalDesignJARs GTbasedIM helloJavaWorld hive html2pdfr iBART iBART InflectSSP informativeSCI informativeSCI InSilicoVA InSilicoVA intamapInteractive InterfaceqPCR iplots ISM JATSdecoder JATSdecoder JavaGD JavaGD JGR jNSMR joinXL joinXL jplantuml4r lar lilikoi LipinskiFilters llama LLM loa loa MadanText MadanText MadanTextNetwork MadanTextNetwork mailR mailR mallet mallet massSpectrometryR matchingMarkets matchingMarkets mauricer mauricer mcbette mcbette metabinR MetChem miRSM mMARCH.AC mMARCH.AC moodef moodef MorbiditySpainR MS2Quant MultiGroupSequential mutossGUI mwa NicheBarcoding NicheBarcoding NLPutils nodeSub nodeSub ODB ODB odkr OhdsiShinyAppBuilder oii openNLP openNLPdata OpenStreetMap OpenStreetMap openVA openVA OptimalRerandExpDesigns OptimalRerandExpDesigns oRus OSMscale OSMscale patRoon paxtoolsr pems.utils pems.utils postGGIR psData qCBA qCBA qdap qdap r5r r5r rapidraker rapidraker RBioFormats rCBA rCBA rcdk rcdklibs rcdklibs rChoiceDialogs Rcurvep Rcurvep Relectoral REPPlab REPPlab REPPlabShiny restoptr restoptr ResultModelManager ResultModelManager rexer rexer rflsgen rflsgen RGMQL rGroovy RH2 RH2 rJava rjd3bench rjd3filters rjd3highfreq rjd3nowcasting rjd3providers rjd3report rjd3revisions rjd3stl rjd3sts rjd3toolkit rjd3tramoseats rjd3workspace rjd3x11plus rjd3x13 RJDBC RJDBC RJDemetra RJDemetra rjdmarkdown rjdmarkdown rjdqa rjdqa rjdworkspace rjdworkspace RJSDMX RJSDMX rkafkajars RKEA RKEAjars RKEEL RMassBank rmcfs rmelting RMOA RMOAjars RNCBIEUtilsLibs RNetLogo RNetLogo rolap rolap rOmniDriver roogledocs rQSAR rRDP rRDP rrepast rrepast RSCAT RSCAT RSentiment RSP rsubgroup rviewgraph RWeka RWekajars RxnSim RxnSim sarks SAvalidation scagnostics scagnostics sdpdth SELEX SensMap SensMap shelltrace shelltrace simplace simplace simplaceUtil sjdbc slowraker slowraker SpatialOmicsOverlay spcosa SQLove SQLove SqlRender SqlRender staplr staplr stops stops streamMOA streamMOA subspace surveycto survHE survHEhmc survHEinla swipeR swipeR tabulapdf tabulapdf tangela testRapi text text topics topics tpfp tssim tvCoef VAExprs venneuler venneuler wallace wallace WhatsR when when wordnet XLConnect XLConnect xlsx xlsx xlsxjars xlsxjars
openjpeg2JPEG 2000 image compression/decompression librarylibopenjp2-7-dev
divest divest
openmpGCC OpenMP (GOMP) support libraryabclass abclass abess abn abn acebayes ACSSpack adaptIVPT adaptIVPT adelie adelie adimpro adjclust adjclust ADMM ADMM aftsem aftsem aihuman aihuman alcyon AllelicSeries AllelicSeries AlphaSimR AlphaSimR AnaCoDa AnaCoDa ANN2 ANN2 AntMAN AntMAN aorsf aorsf Apoderoides Apoderoides apollo ARCensReg ARCensReg ARCokrig ARCokrig asmbPLS asmbPLS ASV atakrig ATNr autoFRK autoRasch aws awsMethods banditpam bandle BART bartcs bartcs BASiCS batchmix batchmix Bayenet Bayenet bayescopulareg bayescopulareg BayesDLMfMRI bayesEO bayesEO BayesMallows BayesMallows bayesPO bayesPO BayesPPD BayesPPDSurv BayesReversePLLH BayesRGMM BayesSpace BayesSUR BayesSUR BayesSurvive baygel baygel bayNorm BCClong BCClong BCEE BDgraph BEKKs BET BGData BGData BGGM BGGM BHMSMAfMRI BHMSMAfMRI BHSBVAR biClassify bigergm biglasso biglasso BigQuic bigsnpr bigsnpr bigstatsr bigstatsr biosensors.usc biosensors.usc blatent blatent Blend Blend blockcluster bmabasket bmabasket BNPmix bonsaiforest bpgmm bpnreg bpnreg bpr BradleyTerryScalable BranchGLM BranchGLM brif BRISC brmsmargins brmsmargins brnn bssm bssm bsvars bsvarSIGNs bsvarSIGNs BTtest BTtest Buddle BUSseq bvhar bvhar CAESAR.Suite CAESAR.Suite carat cartogramR CausalGPS CausalGPS causl CautiousLearning ccImpute CDatanet CDatanet celda CelliD cellWise CFC cglm cheapr cheapr chromstaR circlus CircSpaceTime CircSpaceTime circtree circumplex circumplex cIRT cIRT clubpro clubpro ClusterR ClusterR CLVTools CLVTools cmfilter cmfrec cmfrec CMGFM CMGFM COAP COAP collapse collapse Colossus Colossus combinIT combinIT COMIX communication conleyreg conleyreg conos conos conos conquer conquer coop coop cophescan cophescan copre copre CORElearn cosimmr cosimmr countdata covdepGE covdepGE CovRegRF CPGLIB CPGLIB cpss cpss crctStepdown csdR ctl ctmcd cTMed cTMed CWT CWT dccpp dccpp DCSmooth dcurver dcurver DECIPHER deepgp deform DegNorm Delaporte Delaporte DeMixT demu densityratio densvis DepthProc DepthProc deseats desla desla dexter dexter dexterMST dfmta DGM DGM didimputation DIFM dipm dlmtree dlmtree dmbc dmbc DNABarcodes dnn dotCall64 DOVE drclust DriftBurstHypothesis DriftBurstHypothesis dsem dsem DSSP DSSP dust dust2 DynamicGP DynamicGP Eagle Eagle ebTobit ebTobit echoice2 echoice2 econetwork economiccomplexity eDMA eegUtils EFAfactors EFAtools EFAtools elfDistr elfDistr elgbd elgbd elmNNRcpp elmNNRcpp em em emBayes emIRT emIRT empichar empichar epigraHMM epigrowthfit epigrowthfit EpiLPS EpiLPS epiworldR epiworldR ergmito ergmito errum errum ETAS ETAS evgam evinf evinf excursions excursions expQ2 expSBM fabMix fanc FarmTest FarmTest fastadi fastadi fastcpd fastcpd fasterElasticNet fasterElasticNet fastGLCM fastGLCM fastJT fastLink fastLink fastliu fastpos fastpos fdacluster fdacluster fdaSP fdasrvf fdasrvf fdesigns fDMA fDMA fedmatch FENmlm FGLMtrunc fHMM fHMM fido fido filling filling fixest fixest float float FLORAL FLORAL FMCCSD fmerPack fmf fourPNO fourPNO frailtypack FRESA.CAD FRESA.CAD FRESHD FRESHD fRLR fRLR FSInteract fstcore fwildclusterboot GauPro GauPro GCSM GCSM GeneScape genie genie genieclust genieclust geocmeans geocmeans geocomplexity geocomplexity GeoDiff geoFKF geoFKF geoFourierFDA geoFourierFDA gfiExtremes gfiExtremes ggsc gjam GLCMTextures GLCMTextures glinternet glinvci glinvci gllvm gllvm glmmrOptim glmmrOptim glmmTMB glmmTMB gmGeostats gmvjoint gmvjoint goat goat goftte goldfish goldfish gower gower GPBayes GPBayes gpboost GPCMlasso GPFDA GpGp GpGp GPM GPvecchia graphicalEvidence grattan grattan grattanInflators grattanInflators gravmagsubs greed greed gridOT groupedSurv GWmodel GWmodel3 GxEScanR hashr hashr hawkesbow hawkesbow hdbcp hdbcp HDclust hdflex hdflex HDNRA HDNRA HDTD HDTSA HDTSA healthyAddress healthyAddress hgwrr hgwrr hibayes hibayes highfrequency highfrequency higlasso HistDAWass HistDAWass hkevp hkevp HMB hmcdm hmcdm hpa hrt HSAR hsphase HTLR HTLR huge huge hutilscpp hutilscpp iAR iBMQ iClusterVB iClusterVB icr icr idefix idefix iDOVE image.CornerDetectionHarris image.CornerDetectionHarris image.libfacedetection image.libfacedetection imager imager infinitefactor influenceR influenceR interep interflex intRinsic intRinsic intrinsicFRP intrinsicFRP intsurv intsurv invgamstochvol ipsecr ipsecr iq iq ISoLDE isotree isotree JANE JANE JMbayes JMbayes JMbayes2 JMbayes2 joineRML joineRML jrSiCKLSNMF kalmanfilter kendallknight KernelKnn KernelKnn kimfilter kit kit kmBlock kohonen LA laGP LaMa LaMa lamle Langevin lasR LassoGEE LassoGEE lavacreg lavacreg lddmm ldsep ldsep ldsr ldsr ldt lessSEM lessSEM lfl lfl lidR lidR lightgbm linconGaussR linconGaussR lit lit Lmoments lotri lotri lowmemtkmeans lsirm12pl ludic ludic lvmcomp lvmcomp MABOUST maotai maotai MAPITR MAPITR marble marble markerpen markerpen mashr mashr matchingMarkets matchingMarkets MatchIt MatchIt matrixdist matrixdist MatrixExtra MatrixExtra mccca MDEI MDEI MDFS mdgc mdgc meanr meanr meanShiftR meanShiftR melt melt meshed meshed metapack metapack methimpute mev mev mgcv mgsa miceFast miceFast mig mig miic miic miloR miniPCH miniPCH miRNAss mirt mirt mirtjml mirtjml MixAll mixedBayes mixedBayes mixgb mixgb MixMatrix MixMatrix mixture mlpack mlrv mmand mmand mmcif mmcif mmcm mmcm MMGFM MMGFM mmpca mmpca mnorm modsem modsem moire mombf monty Morpho Morpho motifcounter MPCR mpmi MR.Corr2 MR.CUE MR.LDP MR.RGM MR.RGM mrfse mritc mritc MrMediation mRMRe mRMRe MRPATH MSTest MSTest MultiCOAP MultiCOAP multilink multilink multinomialLogitMix multinomineq multinomineq multivar multivar MultOrdRS MultOrdRS mutualinf mvMAPIT mvMAPIT mvnfast mvrsquared mvrsquared NAIR NAIR netClust netdiffuseR netdiffuseR NetMix NetMix netrankr netrankr NetworkDistance NetworkDistance nftbart nlmeVPC nlmixr2est nlmixr2est nmslibR nmslibR nn2poly nn2poly nonneg.cg normr not NPCirc NPflow NPflow nprobust NScluster nuggets nuggets o2plsda o2plsda oem oem ohoegdm ohoegdm OpenImageR OpenImageR OpenMx OPSR OPSR orthoDr orthoDr OutcomeWeights OutcomeWeights outliertree outliertree PAFit PAFit PAGFL PAGFL pagoda2 pagoda2 parmigene parmigene PartialNetwork PartialNetwork PCMRS penPHcure penPHcure pense pense pgKDEsphere pgsc pgsc Phase123 phenofit phenofit pimeta pimeta PLFD PLFD pliman pliman plmmr plmmr PLSiMCpp poismf poismf pompp pompp poppr poppr PPMR PPMR pprof PQLseq pqrBayes pqrBayes praznik praznik probe probe profoc profoc ProjectionBasedClustering prospectr prospectr psbcSpeedUp psbcSpeedUp PSGD psqn psqn qch qfratio qfratio qris qris qtlpoly qtlpoly QUBIC Racmacs Racmacs RandomFields RandomFieldsUtils RandomFieldsUtils RandomForestsGLS randomForestSRC rasterKernelEstimates rasterKernelEstimates ratematrix ratematrix Rborist RcppArmadillo RcppArmadillo RcppBlaze RcppBlaze RcppCensSpatial RcppCensSpatial RcppColors RcppColors RcppEnsmallen RcppEnsmallen RcppLbfgsBlaze RcppLbfgsBlaze RcppML RcppML rcpptimer rcpptimer Rdimtools Rdimtools rdist rdist ReAD recosystem recosystem redist redist reglogit regmhmm regmhmm regnet regnet rehh relliptical relliptical remify remify remotePARTS remotePARTS remstimate remstimate resemble resemble reservr reservr Rfast Rfast Rfast2 Rfast2 RFCCA rFerns rflann RFpredInterval rGADEM RhpcBLASctl Riemann Riemann RiemBase RiemBase RJcluster Rlibeemd Rlinsolve Rlinsolve Rlof RLT RLT RMFM RMFM rmgarch rmgarch RMSS RMSS rMVP rMVP Rnanoflann RNiftyReg RNiftyReg roben roben roboBayes robustcov robustcov robustHD robustHD robustmatrix rofanova rofanova roll roll rolloptim rpart.LAD rpf RPhosFate RPhosFate RprobitB RprobitB rrpack rrum rrum RSC rsetse Rsomoclu rsvddpd rsvddpd RTMBp rtrend rtrend Rtsne Rtsne runibic Rvcg RWNN RWNN rxode2 rxode2 s2net s2net saeMSPE SAM SAM SANple SANple SANvi SANvi sasfunclust sasfunclust SBmedian SBmedian ScatterDensity ScatterDensity scde scregclust scregclust sdsfun sdsfun sentometrics sentometrics sentopics sentopics seqHMM seqHMM sgs sgs shapr shapr ShrinkCovMat ShrinkCovMat SHT SHT sievePH simer simer SimInf SimInf SIMplyBee SIMplyBee simputation simStateSpace simStateSpace SimSurvNMarker SimSurvNMarker singR sircovid sitmo sitmo sits sits slcm slcm sleev SMME smoots snpsettest snpsettest sommer sommer sox spAbundance spAbundance SpaceTimeBSS SpaCOAP SpaCOAP spaMM SPARK SparseArray SparseArray sparseDFM sparseLTSEigen sparseLTSEigen sparsevb spaths spaths SpatialBSS SpatialKWD SpatMCA SpatMCA SpaTopic SpaTopic SpatPCA SpatPCA spBayes spBPS spBPS specs spfa spinBayes spinBayes SpliceWiz SPlit SplitGLM SplitGLM SplitReg SplitReg splmm spMC spnn spnn spNNGP spOccupancy spOccupancy springer springer squat squat ssgraph sstvars sstvars STAREG statespacer statespacer statgenGWAS statgenGWAS statgenQTLxT STB stelfi StempCens stepSplitReg StochBlock stochQN stpm stpphawkes stratEst stratEst stringdist stringdist StuteTest subrank SubTite SuperpixelImageSegmentation SuperpixelImageSegmentation surbayes surbayes surtvep surtvep svars svars SVP sylcount sylcount SynExtend T4cluster T4cluster T4transport T4transport tabularMLC tabularMLC targeted targeted tci tci tclust tclust TDAkit TDAkit textTinyR textTinyR tfarima tfarima tidylda tidylda tidypopgen tlars tlars TMB TMB tmvtnsim TPmsm TPmsm tramME tramME transport transport treenomial treenomial TruncatedNormal TruncatedNormal tvR tvR twingp twinning UComp unmarked unmarked UPCM updog updog VARDetect VARSELECTEXPOSURE VeccTMVN VeccTMVN vein vein velocyto.R VEwaningVariant VIC5 VIC5 vistla VMDecomp VMDecomp vMF vMF watson wbacon wbacon wbsd wCorr wCorr wordspace wordspace XDNUTS xgboost ycevo ycevo
openmpiHigh performance message passing library bigGP pbdMPI pbdMPI pbdSLAP pbdSLAP Rmpi
opensslSecure Sockets Layer toolkit libssl-dev
arcgisplaces arcgisplaces arrow arrow EikonDownloader HDF5Array mongolite mongolite msoc openssl openssl PKI PKI readspss rhdf5 rhdf5 RSclient RSclient Rserve Rserve rtracklayer s2 s2 websocket websocket
pcre2New Perl Compatible Regular Expression Librarylibpcre2-dev
RcppCWB RcppCWB stringfish stringfish
popplerPDF rendering library libpoppler-glib-dev
libpoppler-cpp-dev
cpp11poppler pdftools pdftools Rpoppler
portaudio19Portable audio I/O C++ bindings portaudio19-dev
openmpt
postgresqlPostgreSQL C client librarylibpq-dev
adbcpostgresql adbcpostgresql RPostgres RPostgres RPostgres RPostgreSQL RPostgreSQL
projCartographic projection librarylibproj-dev
gdalBindings ICESat2VegR lwgeom lwgeom PROJ PROJ proj4 proj4 rgdal sf sf terra terra vol2birdR vol2birdR
protobufProtocol buffers C++ librarylibprotobuf-dev
bigrquerystorage bigrquerystorage cld3 cld3 protolite protolite RProtoBuf RProtoBuf tfevents tfevents
quantlibQuantitative Finance Library libquantlib0-dev
RQuantLib RQuantLib
redlandRedland Resource Description Framework (RDF) librarylibrdf0-dev
redland redland
sqlite3SQLite 3 shared librarylibsqlite3-dev
adbcsqlite adbcsqlite seqminer seqminer
suitesparseSparse Cholesky factorization library for sparse matriceslibsuitesparse-dev
rbff
tclTcl (the Tool Command Language) v8.6 libtcl8.6
tkrplot
tesseractTesseract OCR librarylibtesseract-dev
cpp11tesseract cpp11tesseract tesseract tesseract
tiffTag Image File Format (TIFF) library -- C++ interfacelibtiff-dev
Cairo Cairo ijtiff ijtiff imager imager ragg ragg tiff tiff unigd unigd
tkTk toolkit for Tcl and X11 v8.6 - run-time fileslibtk8.6
tkrplot
udunitsLibrary for handling of units of physical quantitieslibudunits2-dev
RNetCDF RNetCDF udunits2 units units
unixodbcODBC Driver Manager library for Unixunixodbc-dev
odbc odbc RODBC
xz-utilsXZ-format compression libraryliblzma-dev
bamsignals csaw deepSNV DiffBind diffHic epialleleR FLAMES h5vc jackalope jackalope maftools maftools methylKit mitoClone2 podkat QuasR raer Rhtslib Rsamtools scPipe TransView VariantAnnotation vcfppR vcfppR
zeromq3Lightweight messaging kernel libzmq3-dev
clustermq clustermq pbdZMQ pbdZMQ rzmq rzmq
zlibCompression library zlib1g-dev
affyio affyPLM alabaster.base bamsignals beachmat.hdf5 bigsnpr bigsnpr bio3d BPCells chihaya csaw CytoML deepSNV DEploid DEploid devEMF devEMF DiffBind diffHic DropletUtils epialleleR epigraHMM FLAMES flowWorkspace gamstransfer gamstransfer gaston gmapR GMMAT GMMAT h5vc haven haven HDF5Array HiCDCPlus hipread jackalope jackalope maftools maftools makecdfenv methylKit milorGWAS mitoClone2 mongolite mongolite mzR NanoMethViz ncdfFlow ndjson ndjson oligo ondisc ondisc pgenlibr podkat qckitfastq qpdf qpdf QuasR raer rbedrock rbedrock RcppCNPy RcppCNPy readspss Rfastp Rgraphviz rhdf5 rhdf5 Rhdf5lib Rhdf5lib Rhtslib rmatio rmatio Rmmquant RNifti RNifti Rsamtools Rsubread rtracklayer scPipe screenCounter seqminer seqminer seqTools ShortRead Signac Signac snpStats sparkwarc sparkwarc strawr strawr TAQMNGR tidypopgen TransView unigd unigd VariantAnnotation vcfppR vcfppR vcfR vcfR vol2birdR vol2birdR writexl writexl XVector yyjsonr yyjsonr zlib