Showing 6 of total 6 results (show query)
ropensci
spocc:Interface to Species Occurrence Data Sources
A programmatic interface to many species occurrence data sources, including Global Biodiversity Information Facility ('GBIF'), 'iNaturalist', 'eBird', Integrated Digitized 'Biocollections' ('iDigBio'), 'VertNet', Ocean 'Biogeographic' Information System ('OBIS'), and Atlas of Living Australia ('ALA'). Includes functionality for retrieving species occurrence data, and combining those data.
Maintained by Hannah Owens. Last updated 1 months ago.
specimensapiweb-servicesoccurrencesspeciestaxonomygbifinatvertnetebirdidigbioobisalaantwebbisondataecoengineinaturalistoccurrencespecies-occurrencespocc
66.0 match 118 stars 10.09 score 552 scripts 5 dependentsropensci
rgbif:Interface to the Global Biodiversity Information Facility API
A programmatic interface to the Web Service methods provided by the Global Biodiversity Information Facility (GBIF; <https://www.gbif.org/developer/summary>). GBIF is a database of species occurrence records from sources all over the globe. rgbif includes functions for searching for taxonomic names, retrieving information on data providers, getting species occurrence records, getting counts of occurrence records, and using the GBIF tile map service to make rasters summarizing huge amounts of data.
Maintained by John Waller. Last updated 3 days ago.
gbifspecimensapiweb-servicesoccurrencesspeciestaxonomybiodiversitydatalifewatchoscibiospocc
11.0 match 161 stars 13.26 score 2.1k scripts 20 dependentsropensci
rebird:R Client for the eBird Database of Bird Observations
A programmatic client for the eBird database (<https://ebird.org/home>), including functions for searching for bird observations by geographic location (latitude, longitude), eBird hotspots, location identifiers, by notable sightings, by region, and by taxonomic name.
Maintained by Sebastian Pardo. Last updated 1 months ago.
birdsbirdingebirddatabasedatabiologyobservationssightingsornithologyebird-apiebird-webservicesspocc
11.0 match 90 stars 10.43 score 73 scripts 6 dependentsropensci
rvertnet:Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
Retrieve, map and summarize data from the 'VertNet.org' archives (<https://vertnet.org/>). Functions allow searching by many parameters, including 'taxonomic' names, places, and dates. In addition, there is an interface for conducting spatially delimited searches, and another for requesting large 'datasets' via email.
Maintained by Dave Slager. Last updated 5 months ago.
speciesoccurrencesbiodiversitymapsvertnetmammalsmammaliaspecimensapi-wrapperspecimenspocc
11.0 match 7 stars 8.51 score 35 scripts 6 dependentsropensci
rinat:Access 'iNaturalist' Data Through APIs
A programmatic interface to the API provided by the 'iNaturalist' website <https://www.inaturalist.org/> to download species occurrence data submitted by citizen scientists.
Maintained by Stéphane Guillou. Last updated 3 years ago.
11.0 match 56 stars 8.06 score 213 scripts
cmerow
rangeModelMetadata:Provides Templates for Metadata Files Associated with Species Range Models
Range Modeling Metadata Standards (RMMS) address three challenges: they (i) are designed for convenience to encourage use, (ii) accommodate a wide variety of applications, and (iii) are extensible to allow the community of range modelers to steer it as needed. RMMS are based on a data dictionary that specifies a hierarchical structure to catalog different aspects of the range modeling process. The dictionary balances a constrained, minimalist vocabulary to improve standardization with flexibility for users to provide their own values. Merow et al. (2019) <DOI:10.1111/geb.12993> describe the standards in more detail. Note that users who prefer to use the R package 'ecospat' can obtain it from <https://github.com/ecospat/ecospat>.
Maintained by Cory Merow. Last updated 8 months ago.
ecological-metadata-languageecological-modellingecological-modelsecologyspecies-distribution-modellingspecies-distributions
1.7 match 6 stars 6.96 score 16 scripts 3 dependents