Showing 48 of total 48 results (show query)
rstudio
DT:A Wrapper of the JavaScript Library 'DataTables'
Data objects in R can be rendered as HTML tables using the JavaScript library 'DataTables' (typically via R Markdown or Shiny). The 'DataTables' library has been included in this R package. The package name 'DT' is an abbreviation of 'DataTables'.
Maintained by Joe Cheng. Last updated 4 months ago.
datatableshtmlwidgetsjavascriptshiny
25.5 match 604 stars 19.15 score 38k scripts 673 dependents
tidyverse
dtplyr:Data Table Back-End for 'dplyr'
Provides a data.table backend for 'dplyr'. The goal of 'dtplyr' is to allow you to write 'dplyr' code that is automatically translated to the equivalent, but usually much faster, data.table code.
Maintained by Hadley Wickham. Last updated 2 months ago.
12.3 match 671 stars 16.27 score 2.5k scripts 147 dependents
renkun-ken
formattable:Create 'Formattable' Data Structures
Provides functions to create formattable vectors and data frames. 'Formattable' vectors are printed with text formatting, and formattable data frames are printed with multiple types of formatting in HTML to improve the readability of data presented in tabular form rendered in web pages.
Maintained by Kun Ren. Last updated 3 months ago.
6.1 match 700 stars 14.69 score 3.6k scripts 26 dependents
quandl
Quandl:API Wrapper for Quandl.com
Functions for interacting directly with the Quandl API to offer data in a number of formats usable in R, downloading a zip with all data from a Quandl database, and the ability to search. This R package uses the Quandl API. For more information go to <https://docs.quandl.com>. For more help on the package itself go to <https://www.quandl.com/tools/r>.
Maintained by Dave Dotson. Last updated 3 years ago.
8.1 match 137 stars 9.74 score 980 scripts 3 dependents
yihui
knitr:A General-Purpose Package for Dynamic Report Generation in R
Provides a general-purpose tool for dynamic report generation in R using Literate Programming techniques.
Maintained by Yihui Xie. Last updated 1 days ago.
dynamic-documentsknitrliterate-programmingrmarkdownsweave
2.9 match 2.4k stars 23.61 score 116k scripts 4.2k dependents
rte-antares-rpackage
antaresProcessing:'Antares' Results Processing
Process results generated by 'Antares', a powerful open source software developed by RTE (Réseau de Transport d’Électricité) to simulate and study electric power systems (more information about 'Antares' here: <https://github.com/AntaresSimulatorTeam/Antares_Simulator>). This package provides functions to create new columns like net load, load factors, upward and downward margins or to compute aggregated statistics like economic surpluses of consumers, producers and sectors.
Maintained by Tatiana Vargas. Last updated 3 months ago.
infrastructuredataimportadequacyantaresbilandatatableenergylinear-algebramarginsmonte-carlo-simulationoptimizationprevisionnelrtesimulationsurplustyndp
10.0 match 8 stars 6.70 score 35 scripts 1 dependents
bioc
GEOquery:Get data from NCBI Gene Expression Omnibus (GEO)
The NCBI Gene Expression Omnibus (GEO) is a public repository of microarray data. Given the rich and varied nature of this resource, it is only natural to want to apply BioConductor tools to these data. GEOquery is the bridge between GEO and BioConductor.
Maintained by Sean Davis. Last updated 5 months ago.
microarraydataimportonechanneltwochannelsagebioconductorbioinformaticsdata-sciencegenomicsncbi-geo
3.0 match 92 stars 14.46 score 4.1k scripts 44 dependents
cran
jgsbook:Package of the German Book "Statistik mit R und RStudio" by Joerg grosse Schlarmann
All datasets and functions used in the german book "Statistik mit R und RStudio" by grosse Schlarmann (2010-2024) <https://www.produnis.de/R/>.
Maintained by Jörg große Schlarmann. Last updated 9 months ago.
18.9 match 2.18 score
openanalytics
editbl:'DT' Extension for CRUD (Create, Read, Update, Delete) Applications in 'shiny'
The core of this package is a function eDT() which enhances DT::datatable() such that it can be used to interactively modify data in 'shiny'. By the use of generic 'dplyr' methods it supports many types of data storage, with relational databases ('dbplyr') being the main use case.
Maintained by Jasper Schelfhout. Last updated 2 months ago.
6.0 match 23 stars 6.52 score 12 scripts
janmarvin
openxlsx2:Read, Write and Edit 'xlsx' Files
Simplifies the creation of 'xlsx' files by providing a high level interface to writing, styling and editing worksheets.
Maintained by Jan Marvin Garbuszus. Last updated 11 hours ago.
2.5 match 138 stars 13.67 score 194 scripts 11 dependents
desctable
desctable:Produce Descriptive and Comparative Tables Easily
Easily create descriptive and comparative tables. It makes use and integrates directly with the tidyverse family of packages, and pipes. Tables are produced as (nested) dataframes for easy manipulation.
Maintained by Maxime Wack. Last updated 3 years ago.
4.7 match 52 stars 6.85 score 45 scriptsrstudio
shiny:Web Application Framework for R
Makes it incredibly easy to build interactive web applications with R. Automatic "reactive" binding between inputs and outputs and extensive prebuilt widgets make it possible to build beautiful, responsive, and powerful applications with minimal effort.
Maintained by Winston Chang. Last updated 14 days ago.
reactiverstudioshinyweb-appweb-development
1.5 match 5.4k stars 21.28 score 108k scripts 1.8k dependents
rdatatable
data.table:Extension of `data.frame`
Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast add/modify/delete of columns by group using no copies at all, list columns, friendly and fast character-separated-value read/write. Offers a natural and flexible syntax, for faster development.
Maintained by Tyson Barrett. Last updated 12 hours ago.
1.3 match 3.7k stars 23.53 score 230k scripts 4.6k dependentscran
wikibooks:Functions and Datasets of the German WikiBook "GNU R"
The german Wikibook "GNU R" introduces R to new users. This package is a collection of functions and datas used in the german WikiBook "GNU R".
Maintained by Joerg grosse Schlarmann (aka Produnis). Last updated 3 years ago.
16.0 match 1.70 score
iohprofiler
IOHanalyzer:Data Analysis Part of 'IOHprofiler'
The data analysis module for the Iterative Optimization Heuristics Profiler ('IOHprofiler'). This module provides statistical analysis methods for the benchmark data generated by optimization heuristics, which can be visualized through a web-based interface. The benchmark data is usually generated by the experimentation module, called 'IOHexperimenter'. 'IOHanalyzer' also supports the widely used 'COCO' (Comparing Continuous Optimisers) data format for benchmarking.
Maintained by Diederick Vermetten. Last updated 10 months ago.
5.3 match 24 stars 5.10 score 13 scripts
lgnbhl
xlcharts:Create Native 'Excel' Charts and Work with Microsoft 'Excel' Files
An R interface to the 'OpenPyXL' 'Python' library to create native 'Excel' charts and work with Microsoft 'Excel' files.
Maintained by Felix Luginbuhl. Last updated 12 days ago.
6.0 match 12 stars 4.48 score 4 scriptsbioc
TFutils:TFutils
This package helps users to work with TF metadata from various sources. Significant catalogs of TFs and classifications thereof are made available. Tools for working with motif scans are also provided.
Maintained by Vincent Carey. Last updated 4 months ago.
5.0 match 4.80 score 21 scriptsbioc
autonomics:Unified Statistical Modeling of Omics Data
This package unifies access to Statistal Modeling of Omics Data. Across linear modeling engines (lm, lme, lmer, limma, and wilcoxon). Across coding systems (treatment, difference, deviation, etc). Across model formulae (with/without intercept, random effect, interaction or nesting). Across omics platforms (microarray, rnaseq, msproteomics, affinity proteomics, metabolomics). Across projection methods (pca, pls, sma, lda, spls, opls). Across clustering methods (hclust, pam, cmeans). It provides a fast enrichment analysis implementation. And an intuitive contrastogram visualisation to summarize contrast effects in complex designs.
Maintained by Aditya Bhagwat. Last updated 2 months ago.
softwaredataimportpreprocessingdimensionreductionprincipalcomponentregressiondifferentialexpressiongenesetenrichmenttranscriptomicstranscriptiongeneexpressionrnaseqmicroarrayproteomicsmetabolomicsmassspectrometry
4.0 match 5.95 score 5 scripts
nasdaq
NasdaqDataLink:API Wrapper for Nasdaq Data Link
Functions for interacting directly with the Nasdaq Data Link API to offer data in a number of formats usable in R, downloading a zip with all data from a Nasdaq Data Link database, and the ability to search. This R package uses the Nasdaq Data Link API. For more information go to <https://docs.data.nasdaq.com/>. For more help on the package itself go to <https://data.nasdaq.com/tools/r>.
Maintained by Jamie Couture. Last updated 3 years ago.
8.0 match 1 stars 2.70 score 6 scripts
mhahsler
arulesViz:Visualizing Association Rules and Frequent Itemsets
Extends package 'arules' with various visualization techniques for association rules and itemsets. The package also includes several interactive visualizations for rule exploration. Michael Hahsler (2017) <doi:10.32614/RJ-2017-047>.
Maintained by Michael Hahsler. Last updated 7 months ago.
arulesassociation-rulesfrequent-itemsetsinteractive-visualizationsvisualization
1.8 match 54 stars 11.00 score 1.7k scripts 2 dependents
appsilon
shiny.semantic:Semantic UI Support for Shiny
Creating a great user interface for your Shiny apps can be a hassle, especially if you want to work purely in R and don't want to use, for instance HTML templates. This package adds support for a powerful UI library Fomantic UI - <https://fomantic-ui.com/> (before Semantic). It also supports universal UI input binding that works with various DOM elements.
Maintained by Jakub Nowicki. Last updated 11 months ago.
appsilonfomantic-uirhinoversesemanticsemantic-componentssemantic-uishiny
1.5 match 506 stars 13.00 score 586 scripts 3 dependents
ropensci
EML:Read and Write Ecological Metadata Language Files
Work with Ecological Metadata Language ('EML') files. 'EML' is a widely used metadata standard in the ecological and environmental sciences, described in Jones et al. (2006), <doi:10.1146/annurev.ecolsys.37.091305.110031>.
Maintained by Carl Boettiger. Last updated 3 years ago.
emleml-metadatametadata-standard
1.5 match 97 stars 11.19 score 378 scripts 7 dependents
radiant-rstats
radiant.data:Data Menu for Radiant: Business Analytics using R and Shiny
The Radiant Data menu includes interfaces for loading, saving, viewing, visualizing, summarizing, transforming, and combining data. It also contains functionality to generate reproducible reports of the analyses conducted in the application.
Maintained by Vincent Nijs. Last updated 5 months ago.
2.0 match 54 stars 8.30 score 146 scripts 6 dependents
gleon
rLakeAnalyzer:Lake Physics Tools
Standardized methods for calculating common important derived physical features of lakes including water density based based on temperature, thermal layers, thermocline depth, lake number, Wedderburn number, Schmidt stability and others.
Maintained by Luke Winslow. Last updated 4 years ago.
1.8 match 45 stars 9.05 score 280 scripts 1 dependentsropensci
ruODK:An R Client for the ODK Central API
Access and tidy up data from the 'ODK Central' API. 'ODK Central' is a clearinghouse for digitally captured data using ODK <https://docs.getodk.org/central-intro/>. It manages user accounts and permissions, stores form definitions, and allows data collection clients like 'ODK Collect' to connect to it for form download and submission upload. The 'ODK Central' API is documented at <https://docs.getodk.org/central-api/>.
Maintained by Florian W. Mayer. Last updated 4 months ago.
databaseopen-dataodkapidatadatasetodataodata-clientodk-centralopendatakit
2.0 match 42 stars 7.73 score 57 scripts 1 dependents
insightsengineering
teal.modules.clinical:'teal' Modules for Standard Clinical Outputs
Provides user-friendly tools for creating and customizing clinical trial reports. By leveraging the 'teal' framework, this package provides 'teal' modules to easily create an interactive panel that allows for seamless adjustments to data presentation, thereby streamlining the creation of detailed and accurate reports.
Maintained by Dawid Kaledkowski. Last updated 17 days ago.
clinical-trialsmodulesnestoutputsshiny
1.5 match 34 stars 10.25 score 149 scripts
ralmond
CPTtools:Tools for Creating Conditional Probability Tables
Provides support parameterized tables for Bayesian networks, particularly the IRT-like DiBello tables. Also, provides some tools for visualing the networks.
Maintained by Russell Almond. Last updated 3 months ago.
3.0 match 1 stars 5.05 score 21 scripts 4 dependents
stencila
stencilaschema:Bindings for Stencila Schema
Provides R bindings for the Stencila Schema <https://schema.stenci.la>. This package is primarily aimed at R developers wanting to programmatically generate, or modify, executable documents.
Maintained by Nokome Bentley. Last updated 3 years ago.
json-schemapythonrustschema-orgsemantictypescriptvocabulary
3.0 match 17 stars 4.93 score 2 scriptsinsightsengineering
teal.modules.general:General Modules for 'teal' Applications
Prebuilt 'shiny' modules containing tools for viewing data, visualizing data, understanding missing and outlier values within your data and performing simple data analysis. This extends 'teal' framework that supports reproducible research and analysis.
Maintained by Dawid Kaledkowski. Last updated 17 days ago.
general-purposemodulesnestshiny
1.5 match 12 stars 9.76 score 71 scripts
melff
RKernel:Yet another R kernel for Jupyter
Provides a kernel for Jupyter.
Maintained by Martin Elff. Last updated 16 days ago.
jupyterjupyter-kerneljupyter-kernelsjupyter-notebook
3.0 match 38 stars 4.60 score
ianmcook
tidyquery:Query 'R' Data Frames with 'SQL'
Use 'SQL' 'SELECT' statements to query 'R' data frames.
Maintained by Ian Cook. Last updated 2 years ago.
2.3 match 168 stars 5.95 score 35 scriptsopenanalytics
clinUtils:General Utility Functions for Analysis of Clinical Data
Utility functions to facilitate the import, the reporting and analysis of clinical data. Example datasets in 'SDTM' and 'ADaM' format, containing a subset of patients/domains from the 'CDISC Pilot 01 study' are also available as R datasets to demonstrate the package functionalities.
Maintained by Laure Cougnaud. Last updated 10 months ago.
1.9 match 3 stars 6.78 score 105 scripts 3 dependentsbioc
ontoProc:processing of ontologies of anatomy, cell lines, and so on
Support harvesting of diverse bioinformatic ontologies, making particular use of the ontologyIndex package on CRAN. We provide snapshots of key ontologies for terms about cells, cell lines, chemical compounds, and anatomy, to help analyze genome-scale experiments, particularly cell x compound screens. Another purpose is to strengthen development of compelling use cases for richer interfaces to emerging ontologies.
Maintained by Vincent Carey. Last updated 4 days ago.
infrastructuregobioinformaticsgenomicsontology
1.9 match 3 stars 6.37 score 75 scripts 2 dependents
adrientaudiere
MiscMetabar:Miscellaneous Functions for Metabarcoding Analysis
Facilitate the description, transformation, exploration, and reproducibility of metabarcoding analyses. 'MiscMetabar' is mainly built on top of the 'phyloseq', 'dada2' and 'targets' R packages. It helps to build reproducible and robust bioinformatics pipelines in R. 'MiscMetabar' makes ecological analysis of alpha and beta-diversity easier, more reproducible and more powerful by integrating a large number of tools. Important features are described in Taudière A. (2023) <doi:10.21105/joss.06038>.
Maintained by Adrien Taudière. Last updated 27 days ago.
sequencingmicrobiomemetagenomicsclusteringclassificationvisualizationampliconamplicon-sequencingbiodiversity-informaticsecologyilluminametabarcodingngs-analysis
1.8 match 17 stars 6.44 score 23 scripts
zielaskowski
TT:Display Tree Structured Data using Datatable Widget (DT)
Wrapper of datatable widget, allowing display of data.tree objects. All arguments of the data.tree become columns and each node is a row. Adds column with buttons allowing folding and unfolding the levels.
Maintained by Michal Zielaskowski. Last updated 3 years ago.
5.0 match 2.00 score
kjakobse
EpiForsk:Code Sharing at the Department of Epidemiological Research at Statens Serum Institut
This is a collection of assorted functions and examples collected from various projects. Currently we have functionalities for simplifying overlapping time intervals, Charlson comorbidity score constructors for Danish data, getting frequency for multiple variables, getting standardized output from logistic and log-linear regressions, sibling design linear regression functionalities a method for calculating the confidence intervals for functions of parameters from a GLM, Bayes equivalent for hypothesis testing with asymptotic Bayes factor, and several help functions for generalized random forest analysis using 'grf'.
Maintained by Kim Daniel Jakobsen. Last updated 1 years ago.
2.3 match 4.48 score 8 scripts
mlampros
fastText:Efficient Learning of Word Representations and Sentence Classification
An interface to the 'fastText' <https://github.com/facebookresearch/fastText> library for efficient learning of word representations and sentence classification. The 'fastText' algorithm is explained in detail in (i) "Enriching Word Vectors with subword Information", Piotr Bojanowski, Edouard Grave, Armand Joulin, Tomas Mikolov, 2017, <doi:10.1162/tacl_a_00051>; (ii) "Bag of Tricks for Efficient Text Classification", Armand Joulin, Edouard Grave, Piotr Bojanowski, Tomas Mikolov, 2017, <doi:10.18653/v1/e17-2068>; (iii) "FastText.zip: Compressing text classification models", Armand Joulin, Edouard Grave, Piotr Bojanowski, Matthijs Douze, Herve Jegou, Tomas Mikolov, 2016, <arXiv:1612.03651>.
Maintained by Lampros Mouselimis. Last updated 1 years ago.
1.3 match 42 stars 7.37 score 56 scripts
andrie
surveydata:Tools to Work with Survey Data
Data obtained from surveys contains information not only about the survey responses, but also the survey metadata, e.g. the original survey questions and the answer options. The 'surveydata' package makes it easy to keep track of this metadata, and to easily extract columns with specific questions.
Maintained by Andrie de Vries. Last updated 2 years ago.
1.7 match 23 stars 5.68 score 42 scripts
seewe
dataCompare:A 'shiny' App to Compare Two Data Frames
A tool developed with the 'Golem' framework which provides an easier way to check cells differences between two data frames. The user provides two data frames for comparison, selects IDs variables identifying each row of input data, then clicks a button to perform the comparison. Several 'R' package functions are used to describe the data and perform the comparison in the server of the application. The main ones are comparedf() from 'arsenal' and skim() from 'skimr'. For more details see the description of comparedf() from the 'arsenal' package and that of skim() from the 'skimr' package.
Maintained by Sergio Ewane Ebouele. Last updated 3 months ago.
1.9 match 2 stars 4.78 score 4 scripts
danielkovtun
rpredictit:Interface to the 'PredictIt' API
Wrapper to retrieve market data, explore available markets, and plot historical price data from the 'PredictIt' public API (<https://www.predictit.org/api/marketdata/all/>). The package comes with a demo 'shiny' application for illustrating example use cases. License to use data made available via the API is for non-commercial use and 'PredictIt' is the sole source of such data.
Maintained by Daniel Kovtun. Last updated 3 years ago.
1.7 match 4 stars 4.30 score 8 scripts
laresbernardo
lareshiny:Lares 'shiny' Modules
Useful 'shiny' production-ready modules and helpers such as login window and visualization tools.
Maintained by Bernardo Lares. Last updated 2 years ago.
2.0 match 5 stars 3.40 score 2 scripts
indenkun
MissMech:Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random
To test whether the missing data mechanism, in a set of incompletely observed data, is one of missing completely at random (MCAR). For detailed description see Jamshidian, M. Jalal, S., and Jansen, C. (2014). "MissMech: An R Package for Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random (MCAR)", Journal of Statistical Software, 56(6), 1-31. <https://www.jstatsoft.org/v56/i06/> <doi:10.18637/jss.v056.i06>.
Maintained by Mao Kobayashi. Last updated 1 years ago.
1.7 match 3.54 score 54 scripts
learnitr
learnitgrid:Manage Rubrics or Assessment Grids for GitHub Repositories
Create and manage semi-automatically rubrics to assess GitHub projects (R scripts, R Markdown or Quarto files). Create directed projects where students have to complete documents and submit them to GitHub (classroom) so that they are evaluated using the rubric (or assessment grid).
Maintained by Philippe Grosjean. Last updated 9 months ago.
1.8 match 1 stars 3.00 score 7 scripts
jimbrig
jimstools:Tools for R
What the package does (one paragraph).
Maintained by Jimmy Briggs. Last updated 3 years ago.
1.6 match 2 stars 3.00 score 2 scriptscran
vectorsurvR:Data Access and Analytical Tools for 'VectorSurv' Users
Allows registered 'VectorSurv' <https://vectorsurv.org/> users access to data through the 'VectorSurv API' <https://api.vectorsurv.org/>. Additionally provides functions for analysis and visualization.
Maintained by Christina De Cesaris. Last updated 2 months ago.
1.3 match 3.30 score
ipbes-data
IPBES.R:Tool functions used by the Data and Knowledge Technical Support Unit of IPBES
More about what it does (maybe more than one line).
Maintained by Rainer M. Krug. Last updated 1 years ago.
1.8 match 2 stars 2.00 score 10 scriptsbioc
BiocHubsShiny:View AnnotationHub and ExperimentHub Resources Interactively
A package that allows interactive exploration of AnnotationHub and ExperimentHub resources. It uses DT / DataTable to display resources for multiple organisms. It provides template code for reproducibility and for downloading resources via the indicated Hub package.
Maintained by Marcel Ramos. Last updated 13 days ago.
0.5 match 3.90 score 1 scripts
tejapi
Tejapi:API Wrapper for Taiwan Economic Journal Data Service
Functions for interacting directly with the Taiwan Economic Journal API to offer data in R. For more information go to <https://api.tej.com.tw>.
Maintained by Peter Young. Last updated 6 years ago.
1.8 match 1.00 score 3 scripts