Showing 194 of total 194 results (show query)
r-lib
systemfonts:System Native Font Finding
Provides system native access to the font catalogue. As font handling varies between systems it is difficult to correctly locate installed fonts across different operating systems. The 'systemfonts' package provides bindings to the native libraries on Windows, macOS and Linux for finding font files that can then be used further by e.g. graphic devices. The main use is intended to be from compiled code but 'systemfonts' also provides access from R.
Maintained by Thomas Lin Pedersen. Last updated 2 months ago.
45.1 match 95 stars 15.62 score 384 scripts 990 dependents
wch
extrafont:Tools for Using Fonts
Tools to using fonts other than the standard PostScript fonts. This package makes it easy to use system TrueType fonts and with PDF or PostScript output files, and with bitmap output files in Windows. extrafont can also be used with fonts packaged specifically to be used with, such as the fontcm package, which has Computer Modern PostScript fonts with math symbols.
Maintained by Winston Chang. Last updated 2 years ago.
27.4 match 324 stars 14.10 score 13k scripts 51 dependents
hrbrmstr
hrbrthemes:Additional Themes, Theme Components and Utilities for 'ggplot2'
A compilation of extra 'ggplot2' themes, scales and utilities, including a spell check function for plot label fields and an overall emphasis on typography. A copy of the 'Google' font 'Roboto Condensed' is also included.
Maintained by Bob Rudis. Last updated 2 days ago.
data-visualizationdatavisualizationggplot-extensionggplot2ggplot2-scalesggplot2-themesvisualization
27.6 match 1.3k stars 13.92 score 13k scripts 15 dependents
rstudio
fontawesome:Easily Work with 'Font Awesome' Icons
Easily and flexibly insert 'Font Awesome' icons into 'R Markdown' documents and 'Shiny' apps. These icons can be inserted into HTML content through inline 'SVG' tags or 'i' tags. There is also a utility function for exporting 'Font Awesome' icons as 'PNG' images for those situations where raster graphics are needed.
Maintained by Richard Iannone. Last updated 4 months ago.
22.7 match 298 stars 16.15 score 3.1k scripts 4.3k dependents
davidgohel
gdtools:Utilities for Graphical Rendering and Fonts Management
Tools are provided to compute metrics of formatted strings and to check the availability of a font. Another set of functions is provided to support the collection of fonts from 'Google Fonts' in a cache. Their use is simple within 'R Markdown' documents and 'shiny' applications but also with graphic productions generated with the 'ggiraph', 'ragg' and 'svglite' packages or with tabular productions from the 'flextable' package.
Maintained by David Gohel. Last updated 2 months ago.
25.9 match 27 stars 12.80 score 234 scripts 144 dependents
dreamrs
gfonts:Offline 'Google' Fonts for 'Markdown' and 'Shiny'
Download 'Google' fonts and generate 'CSS' to use in 'rmarkdown' documents and 'shiny' applications. Some popular fonts are included and ready to use.
Maintained by Victor Perrier. Last updated 2 years ago.
37.0 match 115 stars 8.48 score 145 scripts 2 dependents
yixuan
sysfonts:Loading Fonts into R
Loading system fonts and Google Fonts <https://fonts.google.com/> into R, in order to support other packages such as 'R2SWF' and 'showtext'.
Maintained by Yixuan Qiu. Last updated 1 years ago.
32.9 match 24 stars 9.27 score 1.5k scripts 39 dependents
bioc
RCy3:Functions to Access and Control Cytoscape
Vizualize, analyze and explore networks using Cytoscape via R. Anything you can do using the graphical user interface of Cytoscape, you can now do with a single RCy3 function.
Maintained by Alex Pico. Last updated 5 months ago.
visualizationgraphandnetworkthirdpartyclientnetwork
21.6 match 52 stars 13.39 score 628 scripts 15 dependents
coolbutuseless
lofifonts:Text Rendering with Bitmap and Vector Fonts
Alternate font rendering is useful when rendering text to novel graphics outputs where modern font rendering is not available or where bespoke text positioning is required. Bitmap and vector fonts allow for custom layout and rendering using pixel coordinates and line drawing. Formatted text is created as a data.frame of pixel coordinates (for bitmap fonts) or stroke coordinates (for vector fonts). All text can be easily previewed as a matrix or raster image. A selection of fonts is included with this package.
Maintained by Mike Cheng. Last updated 24 days ago.
45.5 match 7 stars 5.94 score 10 scriptsyixuan
showtext:Using Fonts More Easily in R Graphs
Making it easy to use various types of fonts ('TrueType', 'OpenType', Type 1, web fonts, etc.) in R graphs, and supporting most output formats of R graphics including PNG, PDF and SVG. Text glyphs will be converted into polygons or raster images, hence after the plot has been created, it no longer relies on the font files. No external software such as 'Ghostscript' is needed to use this package.
Maintained by Yixuan Qiu. Last updated 1 years ago.
fontgraphicsgraphics-devicer-graphicsfreetype
20.9 match 488 stars 12.79 score 10k scripts 34 dependentsdavidgohel
flextable:Functions for Tabular Reporting
Use a grammar for creating and customizing pretty tables. The following formats are supported: 'HTML', 'PDF', 'RTF', 'Microsoft Word', 'Microsoft PowerPoint' and R 'Grid Graphics'. 'R Markdown', 'Quarto' and the package 'officer' can be used to produce the result files. The syntax is the same for the user regardless of the type of output to be produced. A set of functions allows the creation, definition of cell arrangement, addition of headers or footers, formatting and definition of cell content with text and or images. The package also offers a set of high-level functions that allow tabular reporting of statistical models and the creation of complex cross tabulations.
Maintained by David Gohel. Last updated 1 months ago.
docxhtml5ms-office-documentsrmarkdowntable
13.6 match 583 stars 17.04 score 7.3k scripts 119 dependents
lionel-
fontquiver:Set of Installed Fonts
Provides a set of fonts with permissive licences. This is useful when you want to avoid system fonts to make sure your outputs are reproducible.
Maintained by Lionel Henry. Last updated 6 years ago.
25.5 match 17 stars 8.73 score 14 scripts 147 dependentsrstudio
gt:Easily Create Presentation-Ready Display Tables
Build display tables from tabular data with an easy-to-use set of functions. With its progressive approach, we can construct display tables with a cohesive set of table parts. Table values can be formatted using any of the included formatting functions. Footnotes and cell styles can be precisely added through a location targeting system. The way in which 'gt' handles things for you means that you don't often have to worry about the fine details.
Maintained by Richard Iannone. Last updated 11 days ago.
docxeasy-to-usehtmllatexrtfsummary-tables
10.3 match 2.1k stars 18.36 score 20k scripts 112 dependents
ycphs
openxlsx:Read, Write and Edit xlsx Files
Simplifies the creation of Excel .xlsx files by providing a high level interface to writing, styling and editing worksheets. Through the use of 'Rcpp', read/write times are comparable to the 'xlsx' and 'XLConnect' packages with the added benefit of removing the dependency on Java.
Maintained by Jan Marvin Garbuszus. Last updated 2 months ago.
9.5 match 232 stars 18.98 score 20k scripts 270 dependentshrbrmstr
waffle:Create Waffle Chart Visualizations
Square pie charts (a.k.a. waffle charts) can be used to communicate parts of a whole for categorical quantities. To emulate the percentage view of a pie chart, a 10x10 grid should be used with each square representing 1% of the total. Modern uses of waffle charts do not necessarily adhere to this rule and can be created with a grid of any rectangular shape. Best practices suggest keeping the number of categories small, just as should be done when creating pie charts. Tools are provided to create waffle charts as well as stitch them together, and to use glyphs for making isotype pictograms.
Maintained by Bob Rudis. Last updated 1 years ago.
data-visualisationdata-visualizationdatavisualizationggplot2square-pie-chartswaffle-charts
15.0 match 778 stars 10.66 score 1.3k scripts 5 dependentshrbrmstr
ggalt:Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2'
A compendium of new geometries, coordinate systems, statistical transformations, scales and fonts for 'ggplot2', including splines, 1d and 2d densities, univariate average shifted histograms, a new map coordinate system based on the 'PROJ.4'-library along with geom_cartogram() that mimics the original functionality of geom_map(), formatters for "bytes", a stat_stepribbon() function, increased 'plotly' compatibility and the 'StateFace' open source font 'ProPublica'. Further new functionality includes lollipop charts, dumbbell charts, the ability to encircle points and coordinate-system-based text annotations.
Maintained by Bob Rudis. Last updated 2 years ago.
geomggplot-extensionggplot2ggplot2-geomggplot2-scales
12.4 match 674 stars 12.59 score 2.3k scripts 7 dependentsr-lib
svglite:An 'SVG' Graphics Device
A graphics device for R that produces 'Scalable Vector Graphics'. 'svglite' is a fork of the older 'RSvgDevice' package.
Maintained by Thomas Lin Pedersen. Last updated 5 months ago.
9.6 match 182 stars 15.51 score 4.7k scripts 223 dependents
hughjonesd
huxtable:Easily Create and Style Tables for LaTeX, HTML and Other Formats
Creates styled tables for data presentation. Export to HTML, LaTeX, RTF, 'Word', 'Excel', and 'PowerPoint'. Simple, modern interface to manipulate borders, size, position, captions, colours, text styles and number formatting. Table cells can span multiple rows and/or columns. Includes a 'huxreg' function for creation of regression tables, and 'quick_*' one-liners to print data to a new document.
Maintained by David Hugh-Jones. Last updated 12 days ago.
htmlhuxtablelatexmicrosoft-wordpowerpointreproducible-researchtables
10.0 match 323 stars 13.93 score 1.9k scripts 16 dependents
ryo-n7
tvthemes:TV Show Themes and Color Palettes for 'ggplot2' Graphics
Contains various 'ggplot2' themes and color palettes based on TV shows such as 'Game of Thrones', 'Brooklyn Nine-Nine', 'Avatar: The Last Airbender', 'Spongebob Squarepants', and more.
Maintained by Ryo Nakagawara. Last updated 1 years ago.
color-schemedata-vizggplot2ggplot2-themespalette-colorstv-seriestv-shows
17.3 match 140 stars 7.34 score 103 scripts
gadenbuie
xaringanthemer:Custom 'xaringan' CSS Themes
Create beautifully color-coordinated and customized themes for your 'xaringan' slides, without writing any CSS. Complete your slide theme with 'ggplot2' themes that match the font and colors used in your slides. Customized styles can be created directly in your slides' 'R Markdown' source file or in a separate external script.
Maintained by Garrick Aden-Buie. Last updated 6 months ago.
csspresentationremarkjsslidesthemesxaringan
11.2 match 445 stars 11.01 score 4.3k scripts 1 dependents
colearendt
xlsx:Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files
Provide R functions to read/write/format Excel 2007 and Excel 97/2000/XP/2003 file formats.
Maintained by Cole Arendt. Last updated 3 years ago.
8.3 match 85 stars 14.40 score 14k scripts 35 dependents
tidyverse
ggplot2:Create Elegant Data Visualisations Using the Grammar of Graphics
A system for 'declaratively' creating graphics, based on "The Grammar of Graphics". You provide the data, tell 'ggplot2' how to map variables to aesthetics, what graphical primitives to use, and it takes care of the details.
Maintained by Thomas Lin Pedersen. Last updated 9 days ago.
data-visualisationvisualisation
4.5 match 6.6k stars 25.10 score 645k scripts 7.5k dependents
guangchuangyu
emojifont:Emoji and Font Awesome in Graphics
An implementation of using emoji and fontawesome for using in both base and 'ggplot2' graphics.
Maintained by Guangchuang Yu. Last updated 4 years ago.
emojifont-awesomeggplot2visualization
13.3 match 67 stars 8.47 score 900 scripts 3 dependents
trevorld
bittermelon:Bitmap Tools
Provides functions for creating, modifying, and displaying bitmaps including printing them in the terminal. There is a special emphasis on monochrome bitmap fonts and their glyphs as well as colored pixel art/sprites. Provides native read/write support for the 'hex' and 'yaff' bitmap font formats and if 'monobit' <https://github.com/robhagemans/monobit> is installed can also read/write several additional bitmap font formats.
Maintained by Trevor L. Davis. Last updated 2 months ago.
17.6 match 7 stars 6.32 score 2 dependents
dmurdoch
rgl:3D Visualization Using OpenGL
Provides medium to high level functions for 3D interactive graphics, including functions modelled on base graphics (plot3d(), etc.) as well as functions for constructing representations of geometric objects (cube3d(), etc.). Output may be on screen using OpenGL, or to various standard 3D file formats including WebGL, PLY, OBJ, STL as well as 2D image formats, including PNG, Postscript, SVG, PGF.
Maintained by Duncan Murdoch. Last updated 2 months ago.
graphicsopenglrglwebgllibglulibglvndlibpnglibx11freetypecpp
6.0 match 91 stars 17.49 score 7.3k scripts 300 dependents
oxfordihtm
oxthema:Oxford Colours, Palettes, Fonts, and Themes
Colours, palettes, fonts, and themes based on University of Oxford's visual identity guidelines <https://communications.web.ox.ac.uk/communications-resources/visual-identity/identity-guidelines>.
Maintained by Ernest Guevarra. Last updated 5 months ago.
20.4 match 3 stars 4.91 score 10 scripts
katilingban
paleta:Collection of Palettes, Themes, and Theme Components
A collection of palettes, themes, and theme components based on publicly available branding guidelines of various non-governmental organisations, government agencies, and United Nations units.
Maintained by Ernest Guevarra. Last updated 2 months ago.
21.3 match 2 stars 4.48 score 8 scripts
oteros
AeRobiology:A Computational Tool for Aerobiological Data
Different tools for managing databases of airborne particles, elaborating the main calculations and visualization of results. In a first step, data are checked using tools for quality control and all missing gaps are completed. Then, the main parameters of the pollen season are calculated and represented graphically. Multiple graphical tools are available: pollen calendars, phenological plots, time series, tendencies, interactive plots, abundance plots...
Maintained by "Jose Oteros". Last updated 6 years ago.
38.6 match 1 stars 2.46 score 29 scripts
insightsengineering
formatters:ASCII Formatting for Values and Tables
We provide a framework for rendering complex tables to ASCII, and a set of formatters for transforming values or sets of values into ASCII-ready display strings.
Maintained by Joe Zhu. Last updated 2 months ago.
9.2 match 17 stars 10.19 score 22 scripts 20 dependents
haozhu233
kableExtra:Construct Complex Table with 'kable' and Pipe Syntax
Build complex HTML or 'LaTeX' tables using 'kable()' from 'knitr' and the piping syntax from 'magrittr'. Function 'kable()' is a light weight table generator coming from 'knitr'. This package simplifies the way to manipulate the HTML or 'LaTeX' codes generated by 'kable()' and allows users to construct complex tables and customize styles using a readable syntax.
Maintained by Hao Zhu. Last updated 10 days ago.
htmlkablekableextraknitrlatexrmarkdown
4.8 match 702 stars 19.35 score 55k scripts 163 dependentscoolbutuseless
tickle:Easily Build Tcl/Tk UIs
Wrap tcltk to make GUI creation easier.
Maintained by mikefc. Last updated 3 years ago.
15.5 match 125 stars 5.88 score 11 scripts
leonawicz
trekfont:Star Trek Fonts Collection
Provides a collection of true type and open type Star Trek-themed fonts.
Maintained by Matthew Leonawicz. Last updated 6 months ago.
21.1 match 21 stars 4.02 score 8 scriptsyixuan
showtextdb:Font Files for the 'showtext' Package
Providing font files that can be used by the 'showtext' package.
Maintained by Yixuan Qiu. Last updated 5 years ago.
12.7 match 6.59 score 178 scripts 35 dependents
atorus-research
pharmaRTF:Enhanced RTF Wrapper for Use with Existing Table Packages
Enhanced RTF wrapper written in R for use with existing R tables packages such as 'Huxtable' or 'GT'. This package fills a gap where tables in certain packages can be written out to RTF, but cannot add certain metadata or features to the document that are required/expected in a report for a regulatory submission, such as multiple levels of titles and footnotes, making the document landscape, and controlling properties such as margins.
Maintained by Michael Stackhouse. Last updated 3 years ago.
10.2 match 33 stars 8.01 score 128 scripts 2 dependents
janmarvin
openxlsx2:Read, Write and Edit 'xlsx' Files
Simplifies the creation of 'xlsx' files by providing a high level interface to writing, styling and editing worksheets.
Maintained by Jan Marvin Garbuszus. Last updated 2 days ago.
5.8 match 138 stars 13.67 score 194 scripts 11 dependentsdreamrs
fresh:Create Custom 'Bootstrap' Themes to Use in 'Shiny'
Customize 'Bootstrap' and 'Bootswatch' themes, like colors, fonts, grid layout, to use in 'Shiny' applications, 'rmarkdown' documents and 'flexdashboard'.
Maintained by Victor Perrier. Last updated 9 months ago.
bootstrapshinyshiny-applicationsshiny-themes
5.8 match 228 stars 11.99 score 546 scripts 47 dependents
ropensci
skimr:Compact and Flexible Summaries of Data
A simple to use summary function that can be used with pipes and displays nicely in the console. The default summary statistics may be modified by the user as can the default formatting. Support for data frames and vectors is included, and users can implement their own skim methods for specific object types as described in a vignette. Default summaries include support for inline spark graphs. Instructions for managing these on specific operating systems are given in the "Using skimr" vignette and the README.
Maintained by Elin Waring. Last updated 2 months ago.
peer-reviewedropenscisummary-statisticsunconfunconf17
3.8 match 1.1k stars 16.80 score 18k scripts 14 dependents
kassambara
ggpubr:'ggplot2' Based Publication Ready Plots
The 'ggplot2' package is excellent and flexible for elegant data visualization in R. However the default generated plots requires some formatting before we can send them for publication. Furthermore, to customize a 'ggplot', the syntax is opaque and this raises the level of difficulty for researchers with no advanced R programming skills. 'ggpubr' provides some easy-to-use functions for creating and customizing 'ggplot2'- based publication ready plots.
Maintained by Alboukadel Kassambara. Last updated 2 years ago.
3.3 match 1.2k stars 16.68 score 65k scripts 409 dependents
scholaempirica
reschola:The Schola Empirica Package
A collection of utilies, themes and templates for data analysis at Schola Empirica.
Maintained by Jan Netík. Last updated 5 months ago.
11.3 match 4 stars 4.83 score 14 scripts
dbosak01
reporter:Creates Statistical Reports
Contains functions to create regulatory-style statistical reports. Originally designed to create tables, listings, and figures for the pharmaceutical, biotechnology, and medical device industries, these reports are generalized enough that they could be used in any industry. Generates text, rich-text, PDF, HTML, and Microsoft Word file formats. The package specializes in printing wide and long tables with automatic page wrapping and splitting. Reports can be produced with a minimum of function calls, and without relying on other table packages. The package supports titles, footnotes, page header, page footers, spanning headers, page by variables, and automatic page numbering.
Maintained by David Bosak. Last updated 12 months ago.
5.8 match 16 stars 9.35 score 173 scripts 4 dependentsdavidgohel
ggiraph:Make 'ggplot2' Graphics Interactive
Create interactive 'ggplot2' graphics using 'htmlwidgets'.
Maintained by David Gohel. Last updated 3 months ago.
3.8 match 819 stars 14.39 score 4.1k scripts 34 dependentskassambara
survminer:Drawing Survival Curves using 'ggplot2'
Contains the function 'ggsurvplot()' for drawing easily beautiful and 'ready-to-publish' survival curves with the 'number at risk' table and 'censoring count plot'. Other functions are also available to plot adjusted curves for `Cox` model and to visually examine 'Cox' model assumptions.
Maintained by Alboukadel Kassambara. Last updated 5 months ago.
3.3 match 524 stars 15.87 score 7.0k scripts 55 dependents
ludvigolsen
cvms:Cross-Validation for Model Selection
Cross-validate one or multiple regression and classification models and get relevant evaluation metrics in a tidy format. Validate the best model on a test set and compare it to a baseline evaluation. Alternatively, evaluate predictions from an external model. Currently supports regression and classification (binary and multiclass). Described in chp. 5 of Jeyaraman, B. P., Olsen, L. R., & Wambugu M. (2019, ISBN: 9781838550134).
Maintained by Ludvig Renbo Olsen. Last updated 10 days ago.
5.1 match 39 stars 10.31 score 492 scripts 5 dependentsrstudio
sass:Syntactically Awesome Style Sheets ('Sass')
An 'SCSS' compiler, powered by the 'LibSass' library. With this, R developers can use variables, inheritance, and functions to generate dynamic style sheets. The package uses the 'Sass CSS' extension language, which is stable, powerful, and CSS compatible.
Maintained by Carson Sievert. Last updated 11 months ago.
3.4 match 101 stars 15.56 score 252 scripts 4.3k dependents
hanjunwei-lab
DrugSim2DR:Predict Drug Functional Similarity to Drug Repurposing
A systematic biology tool was developed to repurpose drugs via a drug-drug functional similarity network. 'DrugSim2DR' first predict drug-drug functional similarity in the context of specific disease, and then using the similarity constructed a weighted drug similarity network. Finally, it used a network propagation algorithm on the network to identify drugs with significant target abnormalities as candidate drugs.
Maintained by Junwei Han. Last updated 2 years ago.
12.8 match 2 stars 4.00 score 2 scripts
tntp
tntpr:Data Analysis Tools Customized for TNTP
An assortment of functions and templates customized to meet the needs of data analysts at the non-profit organization TNTP. Includes functions for branded colors and plots, credentials management, repository set-up, and other common analytic tasks.
Maintained by Dustin Pashouwer. Last updated 4 months ago.
8.5 match 7 stars 5.83 score 13 scripts
gwidgets3
gWidgets2:Rewrite of gWidgets API for Simplified GUI Construction
Re-implementation of the 'gWidgets' API. The API is defined in this package. A second, toolkit-specific package is required to use it. At this point only 'gWidgets2tcltk' is viable.
Maintained by John Verzani. Last updated 3 years ago.
8.1 match 3 stars 6.00 score 78 scripts 9 dependents
strategicprojects
pikchr:R Wrapper for 'pikchr' (PIC) Diagram Language
An 'R' interface to 'pikchr' (<https://pikchr.org>, pronounced “picture”), a 'PIC'-like markup language for creating diagrams within technical documentation. Originally developed by Brian Kernighan, 'PIC' has been adapted into 'pikchr' by D. Richard Hipp, the creator of 'SQLite'. 'pikchr' is designed to be embedded in fenced code blocks of Markdown or other documentation markup languages, making it ideal for generating diagrams in text-based formats. This package allows R users to seamlessly integrate the descriptive syntax of 'pikchr' for diagram creation directly within the 'R' environment.
Maintained by Andre Leite. Last updated 23 days ago.
9.9 match 1 stars 4.85 score 7 scriptsrstudio
thematic:Unified and Automatic 'Theming' of 'ggplot2', 'lattice', and 'base' R Graphics
Theme 'ggplot2', 'lattice', and 'base' graphics based on a few choices, including foreground color, background color, accent color, and font family. Fonts that aren't available on the system, but are available via download on 'Google Fonts', can be automatically downloaded, cached, and registered for use with the 'showtext' and 'ragg' packages.
Maintained by Carson Sievert. Last updated 8 months ago.
5.0 match 244 stars 9.40 score 760 scripts 3 dependents
gforge
forestplot:Advanced Forest Plot Using 'grid' Graphics
Allows the creation of forest plots with advanced features, such as multiple confidence intervals per row, customizable fonts for individual text elements, and flexible confidence interval drawing. It also supports mixing text with mathematical expressions. The package extends the application of forest plots beyond traditional meta-analyses, offering a more general version of the original 'rmeta' package’s forestplot() function. It relies heavily on the 'grid' package for rendering the plots.
Maintained by Max Gordon. Last updated 4 months ago.
3.9 match 43 stars 11.47 score 716 scripts 21 dependents
s-u
Cairo:R Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output
R graphics device using cairographics library that can be used to create high-quality vector (PDF, PostScript and SVG) and bitmap output (PNG,JPEG,TIFF), and high-quality rendering in displays (X11 and Win32). Since it uses the same back-end for all output, copying across formats is WYSIWYG. Files are created without the dependence on X11 or other external programs. This device supports alpha channel (semi-transparent drawing) and resulting images can contain transparent and semi-transparent regions. It is ideal for use in server environments (file output) and as a replacement for other devices that don't have Cairo's capabilities such as alpha support or anti-aliasing. Backends are modular such that any subset of backends is supported.
Maintained by Simon Urbanek. Last updated 7 months ago.
freetypecairolibx11libjpeg-turboharfbuzzicutiff
3.5 match 14 stars 12.52 score 3.9k scripts 71 dependentslionel-
fontBitstreamVera:Fonts with 'Bitstream Vera Fonts' License
Provides fonts licensed under the 'Bitstream Vera Fonts' license for the 'fontquiver' package.
Maintained by Lionel Henry. Last updated 8 years ago.
6.2 match 7.03 score 145 dependentsrstudio
shinythemes:Themes for Shiny
Themes for use with Shiny. Includes several Bootstrap themes from <https://bootswatch.com/>, which are packaged for use with Shiny applications.
Maintained by Winston Chang. Last updated 3 years ago.
3.3 match 155 stars 13.06 score 8.5k scripts 124 dependents
dpmcsuss
iGraphMatch:Tools for Graph Matching
Versatile tools and data for graph matching analysis with various forms of prior information that supports working with 'igraph' objects, matrix objects, or lists of either.
Maintained by Daniel Sussman. Last updated 10 months ago.
graph-algorithmsgraph-matchingcpp
6.7 match 9 stars 5.83 score 9 scriptsbioc
ggmsa:Plot Multiple Sequence Alignment using 'ggplot2'
A visual exploration tool for multiple sequence alignment and associated data. Supports MSA of DNA, RNA, and protein sequences using 'ggplot2'. Multiple sequence alignment can easily be combined with other 'ggplot2' plots, such as phylogenetic tree Visualized by 'ggtree', boxplot, genome map and so on. More features: visualization of sequence logos, sequence bundles, RNA secondary structures and detection of sequence recombinations.
Maintained by Guangchuang Yu. Last updated 3 months ago.
softwarevisualizationalignmentannotationmultiplesequencealignment
4.0 match 209 stars 9.34 score 196 scripts 2 dependents
dfe-analytical-services
shinyGovstyle:Custom Gov Style Inputs for Shiny
Collection of 'shiny' application styling that are the based on the GOV.UK Design System. See <https://design-system.service.gov.uk/components/> for details.
Maintained by Ross Wyatt. Last updated 2 days ago.
5.6 match 44 stars 6.69 score 25 scriptsr-lib
pkgdown:Make Static HTML Documentation for a Package
Generate an attractive and useful website from a source package. 'pkgdown' converts your documentation, vignettes, 'README', and more to 'HTML' making it easy to share information about your package online.
Maintained by Hadley Wickham. Last updated 9 hours ago.
2.0 match 734 stars 18.47 score 588 scripts 162 dependents
atlas-aai
ratlas:ATLAS Formatting Functions and Templates
Provides templates, formatting tools, and 'ggplot2' themes tailored for the Accessible Teaching, Learning, and Assessment Systems (ATLAS) organization. These templates facilitate the creation of topic guides and technical reports, while the formatting functions enable users to customize numbers and tables to meet specific requirements. Additionally, the themes ensure a uniform visual style across graphics.
Maintained by W. Jake Thompson. Last updated 4 months ago.
bookdownggplot2ggplot2-themesrmarkdownrmarkdown-template
5.0 match 29 stars 7.28 score 20 scripts
unhcr-dataviz
unhcrthemes:UNHCR 'ggplot2' Theme and Colour Palettes
A 'ggplot2' theme and color palettes following the United Nations High Commissioner for Refugees (UNHCR) Data Visualization Guidelines recommendations.
Maintained by Cédric Vidonne. Last updated 2 months ago.
ggplot2ggplot2-scalesggplot2-themes
5.6 match 27 stars 6.44 score 102 scriptstrevorld
hexfont:'GNU Unifont' Hex Fonts
Contains most of the hex font files from the 'GNU Unifont Project' <https://unifoundry.com/unifont/> compressed by 'xz'. 'GNU Unifont' is a duospaced bitmap font that attempts to cover all the official Unicode glyphs plus several of the artificial scripts in the '(Under-)ConScript Unicode Registry' <https://www.kreativekorp.com/ucsur/>. Provides a convenience function for loading in several of them at the same time as a 'bittermelon' bitmap font object for easy rendering of the glyphs in an 'R' terminal or graphics device.
Maintained by Trevor L. Davis. Last updated 5 days ago.
7.1 match 12 stars 5.08 score
great-northern-diver
loon:Interactive Statistical Data Visualization
An extendable toolkit for interactive data visualization and exploration.
Maintained by R. Wayne Oldford. Last updated 2 years ago.
data-analysisdata-sciencedata-visualizationexploratory-analysisexploratory-data-analysishigh-dimensional-datainteractive-graphicsinteractive-visualizationsloonpythonstatistical-analysisstatistical-graphicsstatisticstcl-extensiontk
3.8 match 48 stars 9.00 score 93 scripts 5 dependentsrstudio
bslib:Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown'
Simplifies custom 'CSS' styling of both 'shiny' and 'rmarkdown' via 'Bootstrap' 'Sass'. Supports 'Bootstrap' 3, 4 and 5 as well as their various 'Bootswatch' themes. An interactive widget is also provided for previewing themes in real time.
Maintained by Carson Sievert. Last updated 11 days ago.
bootstraphtmltoolsrmarkdownsassshiny
1.9 match 511 stars 18.02 score 5.1k scripts 4.3k dependents
shosaco
vistime:Pretty Timelines in R
A library for creating time based charts, like Gantt or timelines. Possible outputs include 'ggplot2' diagrams, 'plotly.js' graphs, 'Highcharts.js' widgets and data.frames. Results can be used in the 'RStudio' viewer pane, in 'RMarkdown' documents or in Shiny apps. In the interactive outputs created by vistime() and hc_vistime(), you can interact with the plot using mouse hover or zoom.
Maintained by Sandro Raabe. Last updated 6 months ago.
3.6 match 174 stars 9.37 score 142 scripts 1 dependentsbioc
msmsTests:LC-MS/MS Differential Expression Tests
Statistical tests for label-free LC-MS/MS data by spectral counts, to discover differentially expressed proteins between two biological conditions. Three tests are available: Poisson GLM regression, quasi-likelihood GLM regression, and the negative binomial of the edgeR package.The three models admit blocking factors to control for nuissance variables.To assure a good level of reproducibility a post-test filter is available, where we may set the minimum effect size considered biologicaly relevant, and the minimum expression of the most abundant condition.
Maintained by Josep Gregori i Font. Last updated 5 months ago.
immunooncologysoftwaremassspectrometryproteomics
6.7 match 5.03 score 15 scripts 1 dependents
yutannihilation
string2path:Rendering Font into 'data.frame'
Extract glyph information from font data, and translate the outline curves to flattened paths or tessellated polygons. The converted data is returned as a 'data.frame' in easy-to-plot format.
Maintained by Hiroaki Yutani. Last updated 1 months ago.
5.7 match 99 stars 5.91 score 11 scriptsrstudio
rmarkdown:Dynamic Documents for R
Convert R Markdown documents into a variety of formats.
Maintained by Yihui Xie. Last updated 4 months ago.
literate-programmingmarkdownpandocrmarkdown
1.5 match 2.9k stars 21.79 score 14k scripts 3.7k dependents
sebastien-plutniak
archeofrag:Spatial Analysis in Archaeology from Refitting Fragments
Methods to analyse spatial units in archaeology from the relationships between refitting fragmented objects scattered in these units (e.g. stratigraphic layers). Graphs are used to model archaeological observations. The package is mainly based on the 'igraph' package for graph analysis. Functions can: 1) create, manipulate, and simulate fragmentation graphs, 2) measure the cohesion and admixture of archaeological spatial units, and 3) characterise the topology of a specific set of refitting relationships. Empirical datasets are provided as examples. Documentation about 'archeofrag' is provided by the vignette included in this package, by the accompanying scientific papers: Plutniak (2021, Journal of Archaeological Science, <doi:10.1016/j.jas.2021.105501>) and Plutniak (2022, Journal of Open Source Software, <doi:10.21105/joss.04335>). This package is complemented by a companion GUI application available at <https://analytics.huma-num.fr/Sebastien.Plutniak/archeofrag/>.
Maintained by Sebastien Plutniak. Last updated 6 hours ago.
archaeological-objectsarchaeological-sciencearchaeologyfragmentationnetwork-analysis
5.1 match 20 stars 6.38 score 10 scripts 1 dependents
emmanuelparadis
ape:Analyses of Phylogenetics and Evolution
Functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.
Maintained by Emmanuel Paradis. Last updated 14 hours ago.
1.9 match 64 stars 17.22 score 13k scripts 599 dependents
terminological
ggrrr:Addressing Annoyances and Irritations
Visualisation hacks, tabular data helpers, fonts, caching, tidy data functions. It is an swiss army knife, jack of all trades.
Maintained by Robert Challen. Last updated 9 months ago.
11.7 match 1 stars 2.74 score 11 scriptsr-lib
textshaping:Bindings to the 'HarfBuzz' and 'Fribidi' Libraries for Text Shaping
Provides access to the text shaping functionality in the 'HarfBuzz' library and the bidirectional algorithm in the 'Fribidi' library. 'textshaping' is a low-level utility package mainly for graphic devices that expands upon the font tool-set provided by the 'systemfonts' package.
Maintained by Thomas Lin Pedersen. Last updated 2 months ago.
2.3 match 19 stars 13.58 score 66 scripts 484 dependents
lionel-
fontLiberation:Liberation Fonts
A placeholder for the Liberation fonts.
Maintained by Lionel Henry. Last updated 8 years ago.
4.4 match 7.04 score 2 scripts 145 dependents
kcuilla
reactablefmtr:Streamlined Table Styling and Formatting for Reactable
Provides various features to streamline and enhance the styling of interactive reactable tables with easy-to-use and highly-customizable functions and themes. Apply conditional formatting to cells with data bars, color scales, color tiles, and icon sets. Utilize custom table themes inspired by popular websites such and bootstrap themes. Apply sparkline line & bar charts (note this feature requires the 'dataui' package which can be downloaded from <https://github.com/timelyportfolio/dataui>). Increase the portability and reproducibility of reactable tables by embedding images from the web directly into cells. Save the final table output as a static image or interactive file.
Maintained by Kyle Cuilla. Last updated 2 years ago.
customizationdata-visualizationeasy-to-usereproducibletables
3.5 match 209 stars 8.79 score 460 scripts 4 dependents
urbaninstitute
urbnthemes:Additional theme and utilities for "ggplot2" in the Urban Institute style
Align "ggplot2" output more closely with the Urban Institute Data Visualization style guide <https://urbaninstitute.github.io/r-at-urban/graphics-guide.html>.
Maintained by Aaron R. Williams. Last updated 3 years ago.
5.6 match 79 stars 5.36 score 290 scripts
lgnbhl
xlcharts:Create Native 'Excel' Charts and Work with Microsoft 'Excel' Files
An R interface to the 'OpenPyXL' 'Python' library to create native 'Excel' charts and work with Microsoft 'Excel' files.
Maintained by Felix Luginbuhl. Last updated 11 days ago.
6.6 match 12 stars 4.48 score 4 scripts
eddelbuettel
tint:'tint' is not 'Tufte'
A 'tufte'-alike style for 'rmarkdown'. A modern take on the 'Tufte' design for pdf and html vignettes, building on the 'tufte' package with additional contributions from the 'knitr' and 'ggtufte' package, and also acknowledging the key influence of 'envisioned css'.
Maintained by Dirk Eddelbuettel. Last updated 4 months ago.
3.0 match 262 stars 9.70 score 318 scripts 1 dependents
thebioengineer
camcorder:Record Your Plot History
Record and generate a 'gif' of your 'R' sessions plots. When creating a visualization, there is inevitably iteration and refinement that occurs. Automatically save the plots made to a specified directory, previewing them as they would be saved. Then combine all plots generated into a 'gif' to show the plot refinement over time.
Maintained by Ellis Hughes. Last updated 1 years ago.
3.1 match 208 stars 9.21 score 980 scriptshanjunwei-lab
IDMIR:Identification of Dysregulated MiRNAs Based on MiRNA-MiRNA Interaction Network
A systematic biology tool was developed to identify dysregulated miRNAs via a miRNA-miRNA interaction network. 'IDMIR' first constructed a weighted miRNA interaction network through integrating miRNA-target interaction information, molecular function data from Gene Ontology (GO) database and gene transcriptomic data in specific-disease context, and then, it used a network propagation algorithm on the network to identify significantly dysregulated miRNAs.
Maintained by Junwei Han. Last updated 1 years ago.
14.2 match 2.00 score 2 scripts
omarwagih
ggseqlogo:A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos
The extensive range of functions provided by this package makes it possible to draw highly versatile sequence logos. Features include, but not limited to, modifying colour schemes and fonts used to draw the logo, generating multiple logo plots, and aiding the visualisation with annotations. Sequence logos can easily be combined with other plots 'ggplot2' plots.
Maintained by Omar Wagih. Last updated 5 months ago.
2.4 match 211 stars 11.48 score 786 scripts 13 dependents
syncrosim
rsyncrosim:The R Interface to 'SyncroSim'
'SyncroSim' is a generalized framework for managing scenario-based datasets (<https://syncrosim.com/>). 'rsyncrosim' provides an interface to 'SyncroSim'. Simulation models can be added to 'SyncroSim' in order to transform these datasets, taking advantage of general features such as defining scenarios of model inputs, running Monte Carlo simulations, and summarizing model outputs. 'rsyncrosim' requires 'SyncroSim' 2.3.5 or higher (API documentation: <https://docs.syncrosim.com/>).
Maintained by Katie Birchard. Last updated 9 days ago.
3.8 match 9 stars 7.09 score 189 scripts
cynkra
indiedown:Individual R Markdown Templates
Simplifies the generation of customized R Markdown PDF templates. A template may include an individual logo, typography, geometry or color scheme. The package provides a skeleton with detailed instructions for customizations. The skeleton can be modified by changing defaults in the 'YAML' header, by adding additional 'LaTeX' commands or by applying dynamic adjustments in R. Individual corporate design elements, such as a title page, can be added as R functions that produce 'LaTeX' code.
Maintained by Christoph Sax. Last updated 3 months ago.
3.4 match 32 stars 7.84 score 3 scripts
mgondan
mathml:Translate R Expressions to 'MathML' and 'LaTeX'/'MathJax'
Translate R expressions to 'MathML' or 'MathJax'/'LaTeX' so that they can be rendered in R markdown documents and shiny apps. This package depends on R package 'rolog', which requires an installation of the 'SWI'-'Prolog' runtime either from 'swi-prolog.org' or from R package 'rswipl'.
Maintained by Matthias Gondan. Last updated 4 hours ago.
4.0 match 4 stars 6.46 score 32 scriptswch
fontcm:Computer Modern font for use with extrafont package
Computer Modern font for use with extrafont package
Maintained by Winston Chang. Last updated 11 years ago.
5.4 match 25 stars 4.80 score 50 scripts
svmiller
stevethemes:Steve's 'ggplot2' Themes and Related Theme Elements
This is a compilation of my preferred themes and related theme elements for 'ggplot2'. I believe these themes and theme elements are aesthetically pleasing, both for pedagogical instruction and for the presentation of applied statistical research to a wide audience. These themes imply routine use of easily obtained/free fonts, simple forms of which are included in this package.
Maintained by Steve Miller. Last updated 2 years ago.
5.7 match 13 stars 4.40 score 39 scriptsrstudio
shinydashboard:Create Dashboards with 'Shiny'
Create dashboards with 'Shiny'. This package provides a theme on top of 'Shiny', making it easy to create attractive dashboards.
Maintained by Winston Chang. Last updated 3 years ago.
admin-dashboarddashboardreactivityrstudioshinyshinydashboardweb-appweb-development
1.6 match 906 stars 15.30 score 17k scripts 208 dependents
pepijn-devries
AmigaFFH:Commodore Amiga File Format Handler
Modern software often poorly support older file formats. This package intends to handle many file formats that were native to the antiquated Commodore Amiga machine. This package focuses on file types from the older Amiga operating systems (<= 3.0). It will read and write specific file formats and coerces them into more contemporary data.
Maintained by Pepijn de Vries. Last updated 2 months ago.
5.5 match 4 stars 4.21 score 41 scripts
hneth
unicol:The Colors of your University
Most universities use specific color combinations to express their unique brand identity. The 'unicol' package provides the colors and color palettes of various universities for easy plotting and printing in R. We collect and provide a diverse range of color palettes for creating scientific visualizations.
Maintained by Hansjoerg Neth. Last updated 7 months ago.
brandingcolorcolor-palettescolor-schemescorporate-designuniversity-colorsvisual-identity
3.5 match 9 stars 6.58 score 10 scriptsinsightsengineering
autoslider.core:Slide Automation for Tables, Listings and Figures
The normal process of creating clinical study slides is that a statistician manually type in the numbers from outputs and a separate statistician to double check the typed in numbers. This process is time consuming, resource intensive, and error prone. Automatic slide generation is a solution to address these issues. It reduces the amount of work and the required time when creating slides, and reduces the risk of errors from manually typing or copying numbers from the output to slides. It also helps users to avoid unnecessary stress when creating large amounts of slide decks in a short time window.
Maintained by Joe Zhu. Last updated 2 months ago.
3.8 match 3 stars 5.91 score 3 scripts
choonghyunryu
dlookr:Tools for Data Diagnosis, Exploration, Transformation
A collection of tools that support data diagnosis, exploration, and transformation. Data diagnostics provides information and visualization of missing values, outliers, and unique and negative values to help you understand the distribution and quality of your data. Data exploration provides information and visualization of the descriptive statistics of univariate variables, normality tests and outliers, correlation of two variables, and the relationship between the target variable and predictor. Data transformation supports binning for categorizing continuous variables, imputes missing values and outliers, and resolves skewness. And it creates automated reports that support these three tasks.
Maintained by Choonghyun Ryu. Last updated 9 months ago.
2.0 match 212 stars 11.05 score 748 scripts 2 dependentshanjunwei-lab
DRviaSPCN:Drug Repurposing in Cancer via a Subpathway Crosstalk Network
A systematic biology tool was developed to repurpose drugs via a subpathway crosstalk network. The operation modes include 1) calculating centrality scores of SPs in the context of gene expression data to reflect the influence of SP crosstalk, 2) evaluating drug-disease reverse association based on disease- and drug-induced SPs weighted by the SP crosstalk, 3) identifying cancer candidate drugs through perturbation analysis. There are also several functions used to visualize the results.
Maintained by Junwei Han. Last updated 2 months ago.
10.9 match 2.00 score 5 scripts
larmarange
ggstats:Extension to 'ggplot2' for Plotting Stats
Provides new statistics, new geometries and new positions for 'ggplot2' and a suite of functions to facilitate the creation of statistical plots.
Maintained by Joseph Larmarange. Last updated 6 days ago.
1.7 match 37 stars 13.08 score 190 scripts 156 dependents
talgalili
dendextend:Extending 'dendrogram' Functionality in R
Offers a set of functions for extending 'dendrogram' objects in R, letting you visualize and compare trees of 'hierarchical clusterings'. You can (1) Adjust a tree's graphical parameters - the color, size, type, etc of its branches, nodes and labels. (2) Visually and statistically compare different 'dendrograms' to one another.
Maintained by Tal Galili. Last updated 2 months ago.
1.3 match 154 stars 17.02 score 6.0k scripts 164 dependents
jbengler
tidyplots:Tidy Plots for Scientific Papers
The goal of 'tidyplots' is to streamline the creation of publication-ready plots for scientific papers. It allows to gradually add, remove and adjust plot components using a consistent and intuitive syntax.
Maintained by Jan Broder Engler. Last updated 4 days ago.
2.3 match 482 stars 9.40 score 85 scripts
shinyworks
favawesome:'Font Awesome' Icons as 'shiny' 'favicons'
Easily use 'Font Awesome' icons as 'shiny' 'favicons' (the icons that appear on browser tabs). 'Font Awesome' (<https://fontawesome.com/>) is a popular set of icons that can be used in web pages. 'favawesome' provides a simple way to use these icons as 'favicons' in 'shiny' applications and other HTML pages.
Maintained by Jon Harmon. Last updated 4 months ago.
5.6 match 4 stars 3.78 score
pachadotdev
d3po:Fast and Beautiful Interactive Visualization for 'Markdown' and 'Shiny'
Apache licensed alternative to 'Highcharter' which provides functions for both fast and beautiful interactive visualization for 'Markdown' and 'Shiny'.
Maintained by Mauricio Vargas Sepulveda. Last updated 2 years ago.
3.3 match 43 stars 6.31 score 24 scripts
daqana
tikzDevice:R Graphics Output in LaTeX Format
Provides a graphics output device for R that records plots in a LaTeX-friendly format. The device transforms plotting commands issued by R functions into LaTeX code blocks. When included in a LaTeX document, these blocks are interpreted with the help of 'TikZ'---a graphics package for TeX and friends written by Till Tantau. Using the 'tikzDevice', the text of R plots can contain LaTeX commands such as mathematical formula. The device also allows arbitrary LaTeX code to be inserted into the output stream.
Maintained by Ralf Stubner. Last updated 9 months ago.
1.9 match 134 stars 11.00 score 1.4k scripts 4 dependents
msberends
plot2:A Plotting Assistant for Fast 'ggplot2' Visualisations
A streamlined extension of 'ggplot2' designed to simplify and accelerate the creation of data visualisations. 'plot2' automates common tasks such as axis handling, plot type selection, and data transformation, allowing users to create complex, publication-ready plots with minimal code. It integrates seamlessly with the tidyverse and retains full compatibility with 'ggplot2', while offering additional conveniences like enhanced sorting, faceting, and custom theming.
Maintained by Matthijs S. Berends. Last updated 8 days ago.
ggplot2helperplottingtidyverse
4.7 match 1 stars 4.32 score 8 scripts 1 dependents
cardiomoon
ztable:Zebra-Striped Tables in LaTeX and HTML Formats
Makes zebra-striped tables (tables with alternating row colors) in LaTeX and HTML formats easily from a data.frame, matrix, lm, aov, anova, glm, coxph, nls, fitdistr, mytable and cbind.mytable objects.
Maintained by Keon-Woong Moon. Last updated 2 years ago.
2.5 match 21 stars 7.90 score 212 scripts 2 dependentsyixuan
prettydoc:Creating Pretty Documents from R Markdown
Creating tiny yet beautiful documents and vignettes from R Markdown. The package provides the 'html_pretty' output format as an alternative to the 'html_document' and 'html_vignette' engines that convert R Markdown into HTML pages. Various themes and syntax highlight styles are supported.
Maintained by Yixuan Qiu. Last updated 4 years ago.
1.5 match 485 stars 12.89 score 550 scripts 8 dependents
laresbernardo
lares:Analytics & Machine Learning Sidekick
Auxiliary package for better/faster analytics, visualization, data mining, and machine learning tasks. With a wide variety of family functions, like Machine Learning, Data Wrangling, Marketing Mix Modeling (Robyn), Exploratory, API, and Scrapper, it helps the analyst or data scientist to get quick and robust results, without the need of repetitive coding or advanced R programming skills.
Maintained by Bernardo Lares. Last updated 24 days ago.
analyticsapiautomationautomldata-sciencedescriptive-statisticsh2omachine-learningmarketingmmmpredictive-modelingpuzzlerlanguagerobynvisualization
2.0 match 233 stars 9.84 score 185 scripts 1 dependents
certe-medical-epidemiology
certestyle:A Certe R Package for Applying Certe Organisational Style
A Certe R Package for applying the organisational colours and style of Certe, plus some additional formatting functions. This package is part of the 'certedata' universe.
Maintained by Matthijs S. Berends. Last updated 8 months ago.
4.0 match 4.87 score 1 scripts 7 dependents
sakk-statistics
survSAKK:Create Publication Ready Kaplan-Meier Plots
Incorporate various statistics and layout customization options to enhance the efficiency and adaptability of the Kaplan-Meier plots.
Maintained by Katrin Gysel. Last updated 2 months ago.
3.8 match 1 stars 4.81 score 10 scripts
datastorm-open
visNetwork:Network Visualization using 'vis.js' Library
Provides an R interface to the 'vis.js' JavaScript charting library. It allows an interactive visualization of networks.
Maintained by Benoit Thieurmel. Last updated 2 years ago.
1.2 match 549 stars 15.14 score 4.1k scripts 195 dependentshrbrmstr
vegalite:Tools to Encode Visualizations with the 'Grammar of Graphics'-Like 'Vega-Lite' 'Spec'
The 'Vega-Lite' 'JavaScript' framework provides a higher-level grammar for visual analysis, akin to 'ggplot' or 'Tableau', that generates complete 'Vega' specifications. Functions exist which enable building a valid 'spec' from scratch or importing a previously created 'spec' file. Functions also exist to export 'spec' files and to generate code which will enable plots to be embedded in properly configured web pages. The default behavior is to generate an 'htmlwidget'.
Maintained by Bob Rudis. Last updated 7 years ago.
data-visualizationdatavisualizationvega-litevega-lite-specvisualizationwidget
2.3 match 158 stars 7.60 score 84 scriptsbioc
simplifyEnrichment:Simplify Functional Enrichment Results
A new clustering algorithm, "binary cut", for clustering similarity matrices of functional terms is implemeted in this package. It also provides functions for visualizing, summarizing and comparing the clusterings.
Maintained by Zuguang Gu. Last updated 5 months ago.
softwarevisualizationgoclusteringgenesetenrichment
2.0 match 113 stars 8.02 score 196 scripts
schaffman5
rtf:Rich Text Format (RTF) Output
A set of R functions to output Rich Text Format (RTF) files with high resolution tables and graphics that may be edited with a standard word processor such as Microsoft Word.
Maintained by Michael E. Schaffer. Last updated 6 years ago.
1.8 match 5 stars 8.55 score 169 scripts 10 dependentseddelbuettel
binb:'binb' is not 'Beamer'
A collection of 'LaTeX' styles using 'Beamer' customization for pdf-based presentation slides in 'RMarkdown'. At present it contains 'RMarkdown' adaptations of the LaTeX themes 'Metropolis' (formerly 'mtheme') theme by Matthias Vogelgesang and others (now included in 'TeXLive'), the 'IQSS' them by Ista Zahn (which is included here), and the 'Monash' theme by Rob J Hyndman. Additional (free) fonts may be needed: 'Metropolis' prefers 'Fira', and 'IQSS' requires 'Libertinus'.
Maintained by Dirk Eddelbuettel. Last updated 3 months ago.
beamerbeamer-presentationbeamer-thememarkdownpdfrmarkdownrmarkdown-beamer
1.8 match 189 stars 8.31 score 2 scripts 2 dependents
rpuggaardrode
praatpicture:'Praat Picture' Style Plots of Acoustic Data
Quickly and easily generate plots of acoustic data aligned with transcriptions similar to those made in 'Praat' using either derived signals generated directly in R with 'wrassp' or imported derived signals from 'Praat'. Provides easy and fast out-of-the-box solutions but also a high extent of flexibility. Also provides options for embedding audio in figures and animating figures.
Maintained by Rasmus Puggaard-Rode. Last updated 20 days ago.
2.9 match 29 stars 5.28 score 3 scripts
stla
rAmCharts4:Interface to the JavaScript Library 'amCharts 4'
Creates JavaScript charts. The charts can be included in 'Shiny' apps and R markdown documents, or viewed from the R console and 'RStudio' viewer. Based on the JavaScript library 'amCharts 4' and the R packages 'htmlwidgets' and 'reactR'. Currently available types of chart are: vertical and horizontal bar chart, radial bar chart, stacked bar chart, vertical and horizontal Dumbbell chart, line chart, scatter chart, range area chart, gauge chart, boxplot chart, pie chart, and 100% stacked bar chart.
Maintained by Stéphane Laurent. Last updated 2 years ago.
3.3 match 28 stars 4.61 score 29 scripts
vankesteren
firatheme:A ggplot2 Theme using the Fira Sans Font
Make your graphs pretty with the Fira font, colours and prettified axes and labels.
Maintained by Erik-Jan van Kesteren. Last updated 4 years ago.
3.5 match 76 stars 4.24 score 46 scriptsdreamrs
phosphoricons:'Phosphor' Icons for R
Use 'Phosphor' icons in 'shiny' applications or 'rmarkdown' documents. Icons are available in 5 different weights and can be customized by setting color, size, orientation and more.
Maintained by Victor Perrier. Last updated 6 months ago.
2.0 match 25 stars 7.22 score 26 scripts 9 dependents
vigou3
actuar:Actuarial Functions and Heavy Tailed Distributions
Functions and data sets for actuarial science: modeling of loss distributions; risk theory and ruin theory; simulation of compound models, discrete mixtures and compound hierarchical models; credibility theory. Support for many additional probability distributions to model insurance loss size and frequency: 23 continuous heavy tailed distributions; the Poisson-inverse Gaussian discrete distribution; zero-truncated and zero-modified extensions of the standard discrete distributions. Support for phase-type distributions commonly used to compute ruin probabilities. Main reference: <doi:10.18637/jss.v025.i07>. Implementation of the Feller-Pareto family of distributions: <doi:10.18637/jss.v103.i06>.
Maintained by Vincent Goulet. Last updated 2 months ago.
1.5 match 12 stars 9.44 score 732 scripts 35 dependents
CausalImpact:Inferring Causal Effects using Bayesian Structural Time-Series Models
Implements a Bayesian approach to causal impact estimation in time series, as described in Brodersen et al. (2015) <DOI:10.1214/14-AOAS788>. See the package documentation on GitHub <https://google.github.io/CausalImpact/> to get started.
Maintained by Alain Hauser. Last updated 2 years ago.
1.2 match 1.7k stars 11.73 score 276 scripts 2 dependents
warwick-stats-resources
warwickplots:Palettes and Themes Consistent with The University of Warwick's Brand
Colour palettes and a 'ggplot2' theme that are consistent with The University of Warwick' branding. Built using the 'palettes' package, which provides methods for printing, formatting, casting and coercion, extraction and updating of components, plotting, colour mixing arithmetic, and colour interpolation.
Maintained by Ella Kaye. Last updated 10 months ago.
3.8 match 1 stars 3.56 score 12 scripts
ardata-fr
mschart:Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint' Documents
Create native charts for 'Microsoft PowerPoint' and 'Microsoft Word' documents. These can then be edited and annotated. Functions are provided to let users create charts, modify and format their content. The chart's underlying data is automatically saved within the 'Word' document or 'PowerPoint' presentation. It extends package 'officer' that does not contain any feature for 'Microsoft' native charts production.
Maintained by David Gohel. Last updated 11 months ago.
ms-office-documentsofficepowerpointword
1.9 match 132 stars 7.22 score 108 scripts 1 dependentsbioc
motifStack:Plot stacked logos for single or multiple DNA, RNA and amino acid sequence
The motifStack package is designed for graphic representation of multiple motifs with different similarity scores. It works with both DNA/RNA sequence motif and amino acid sequence motif. In addition, it provides the flexibility for users to customize the graphic parameters such as the font type and symbol colors.
Maintained by Jianhong Ou. Last updated 2 months ago.
sequencematchingvisualizationsequencingmicroarrayalignmentchipchipchipseqmotifannotationdataimport
1.7 match 7.93 score 188 scripts 6 dependents
asa12138
pcutils:Some Useful Functions for Statistics and Visualization
Offers a range of utilities and functions for everyday programming tasks. 1.Data Manipulation. Such as grouping and merging, column splitting, and character expansion. 2.File Handling. Read and convert files in popular formats. 3.Plotting Assistance. Helpful utilities for generating color palettes, validating color formats, and adding transparency. 4.Statistical Analysis. Includes functions for pairwise comparisons and multiple testing corrections, enabling perform statistical analyses with ease. 5.Graph Plotting, Provides efficient tools for creating doughnut plot and multi-layered doughnut plot; Venn diagrams, including traditional Venn diagrams, upset plots, and flower plots; Simplified functions for creating stacked bar plots, or a box plot with alphabets group for multiple comparison group.
Maintained by Chen Peng. Last updated 5 months ago.
2.0 match 22 stars 6.57 score 28 scripts 4 dependents
graphdr
formatdown:Formatting Numbers in 'rmarkdown' Documents
Provides a small set of tools for formatting numbers in R-markdown documents. Convert a numerical vector to character strings in power-of-ten form, decimal form, or measurement-units form; all are math-delimited for rendering as inline equations. Can also convert text into math-delimited text to match the font face and size of math-delimited numbers. Useful for rendering single numbers in inline R code chunks and for rendering columns in tables.
Maintained by Richard Layton. Last updated 10 months ago.
2.0 match 8 stars 6.46 score 27 scripts
ipeadata-lab
ipeaplot:Add Ipea Editorial Standards to 'ggplot2' Graphics
Convenient functions to create 'ggplot2' graphics following the editorial guidelines of the Institute for Applied Economic Research (Ipea).
Maintained by Pedro Ferreira. Last updated 18 days ago.
2.0 match 3 stars 6.49 score 17 scripts
fmmattioni
downloadthis:Implement Download Buttons in 'rmarkdown'
Implement download buttons in HTML output from 'rmarkdown' without the need for 'runtime:shiny'.
Maintained by Felipe Mattioni Maturana. Last updated 5 months ago.
1.3 match 146 stars 9.63 score 856 scripts 1 dependents
lz100
spsComps:'systemPipeShiny' UI and Server Components
The systemPipeShiny (SPS) framework comes with many UI and server components. However, installing the whole framework is heavy and takes some time. If you would like to use UI and server components from SPS in your own Shiny apps, do not hesitate to try this package.
Maintained by Le Zhang. Last updated 1 years ago.
1.9 match 31 stars 6.56 score 65 scripts 4 dependents
tgouhier
biwavelet:Conduct Univariate and Bivariate Wavelet Analyses
This is a port of the WTC MATLAB package written by Aslak Grinsted and the wavelet program written by Christopher Torrence and Gibert P. Compo. This package can be used to perform univariate and bivariate (cross-wavelet, wavelet coherence, wavelet clustering) analyses.
Maintained by Tarik Gouhier. Last updated 7 months ago.
1.6 match 45 stars 7.51 score 81 scripts 1 dependents
ocha-dap
gghdx:HDX Theme, Scales, and Other Conveniences for 'ggplot2'
A Humanitarian Data Exchange (HDX) theme, color palettes, and scales for 'ggplot2' to allow users to easily follow the HDX visual design guide, including convenience functions for for loading and using the Source Sans 3 font.
Maintained by Seth Caldwell. Last updated 6 months ago.
2.0 match 5 stars 5.87 score 74 scripts
piecepackr
piecepackr:Board Game Graphics
Functions to make board game graphics with the 'ggplot2', 'grid', 'rayrender', 'rayvertex', and 'rgl' packages. Specializes in game diagrams, animations, and "Print & Play" layouts for the 'piecepack' <https://www.ludism.org/ppwiki> but can make graphics for other board game systems. Includes configurations for several public domain game systems such as checkers, (double-18) dominoes, go, 'piecepack', playing cards, etc.
Maintained by Trevor L. Davis. Last updated 4 days ago.
2.0 match 59 stars 5.77 score 3 dependents
flavjack
huito:Reproducible and Flexible Label Design
An open-source R package to deploys reproducible and flexible labels using layers. The 'huito' package is part of the 'inkaverse' project for developing different procedures and tools used in plant science and experimental designs. Learn more about the 'inkaverse' project at <https://inkaverse.com/>.
Maintained by Flavio Lozano-Isla. Last updated 6 months ago.
2.3 match 1 stars 4.79 score 31 scripts
pharmaverse
tidytlg:Create TLGs using the 'tidyverse'
Generate tables, listings, and graphs (TLG) using 'tidyverse.' Tables can be created functionally, using a standard TLG process, or by specifying table and column metadata to create generic analysis summaries. The 'envsetup' package can also be leveraged to create environments for table creation.
Maintained by Konrad Pagacz. Last updated 9 months ago.
1.3 match 33 stars 8.07 score 22 scripts
nutterb
pixiedust:Tables so Beautifully Fine-Tuned You Will Believe It's Magic
The introduction of the 'broom' package has made converting model objects into data frames as simple as a single function. While the 'broom' package focuses on providing tidy data frames that can be used in advanced analysis, it deliberately stops short of providing functionality for reporting models in publication-ready tables. 'pixiedust' provides this functionality with a programming interface intended to be similar to 'ggplot2's system of layers with fine tuned control over each cell of the table. Options for output include printing to the console and to the common markdown formats (markdown, HTML, and LaTeX). With a little 'pixiedust' (and happy thoughts) tables can really fly.
Maintained by Benjamin Nutter. Last updated 1 years ago.
1.3 match 180 stars 8.01 score 94 scriptsguangchuangyu
meme:Create Meme
The word 'Meme' was originated from the book, 'The Selfish Gene', authored by Richard Dawkins (1976). It is a unit of culture that is passed from one generation to another and correlates to the gene, the unit of physical heredity. The internet memes are captioned photos that are intended to be funny, ridiculous. Memes behave like infectious viruses and travel from person to person quickly through social media. The 'meme' package allows users to make custom memes.
Maintained by Guangchuang Yu. Last updated 4 years ago.
1.5 match 45 stars 7.08 score 54 scriptscoolbutuseless
nara:Native Raster Image Tools
Tools for 'nativeRaster' images.
Maintained by Mike Cheng. Last updated 29 days ago.
1.7 match 62 stars 6.32 score 42 scripts
mthulin
ivo.table:Nicely Formatted Contingency Tables and Frequency Tables
Nicely formatted frequency tables and contingency tables (1-way, 2-way, 3-way and 4-way tables), that can easily be exported to HTML or 'Office' documents. Designed to work with pipes.
Maintained by Måns Thulin. Last updated 21 days ago.
1.8 match 4 stars 5.81 score 6 scripts
myles-lewis
easylabel:Interactive Scatter Plot and Volcano Plot Labels
Interactive labelling of scatter plots, volcano plots and Manhattan plots using a 'shiny' and 'plotly' interface. Users can hover over points to see where specific points are located and click points on/off to easily label them. Labels can be dragged around the plot to place them optimally. Plots can be exported directly to PDF for publication. For plots with large numbers of points, points can optionally be rasterized as a bitmap, while all other elements (axes, text, labels & lines) are preserved as vector objects. This can dramatically reduce file size for plots with millions of points such as Manhattan plots, and is ideal for publication.
Maintained by Myles Lewis. Last updated 1 months ago.
1.9 match 8 stars 5.56 score 8 scripts
carmefont
nlMS:Non-Linear Model Selection
Package to select best model among several linear and nonlinear models. The main function uses the gnls() function from the 'nlme' package to fit the data to nine regression models, named: "linear", "quadratic", "cubic", "logistic", "exponential", "power", "monod", "haldane", "logit".
Maintained by Carme Font. Last updated 6 years ago.
10.4 match 1.00 score
jrosell
jrrosell:Personal R package for Jordi Rosell
Useful functions for personal usage.
Maintained by Jordi Rosell. Last updated 3 months ago.
3.4 match 2 stars 3.08 score 7 scripts
ropengov
rogtemplate:'pkgdown' Template for 'rOpenGov' Packages
This is a private template for use by core rOpenGov packages. Please don’t use for your own code.
Maintained by Diego Hernangómez. Last updated 1 months ago.
ropengovtemplategithub-actionspkgdownpkgdown-template
2.0 match 2 stars 5.16 score 3 scriptsleonawicz
rtrek:Data Analysis Relating to Star Trek
Provides datasets related to the Star Trek fictional universe and functions for working with the data. The package also provides access to real world datasets based on the televised series and other related licensed media productions. It interfaces with the Star Trek API (STAPI) (<http://stapi.co/>), Memory Alpha (<https://memory-alpha.fandom.com/wiki/Portal:Main>), and Memory Beta (<https://memory-beta.fandom.com/wiki/Main_Page>) to retrieve data, metadata and other information relating to Star Trek. It also contains several local datasets covering a variety of topics. The package also provides functions for working with data from other Star Trek-related R data packages containing larger datasets not stored in 'rtrek'.
Maintained by Matthew Leonawicz. Last updated 6 months ago.
1.9 match 54 stars 5.42 score 49 scriptsbioc
CTexploreR:Explores Cancer Testis Genes
The CTexploreR package re-defines the list of Cancer Testis/Germline (CT) genes. It is based on publicly available RNAseq databases (GTEx, CCLE and TCGA) and summarises CT genes' main characteristics. Several visualisation functions allow to explore their expression in different types of tissues and cancer cells, or to inspect the methylation status of their promoters in normal tissues.
Maintained by Axelle Loriot. Last updated 5 months ago.
transcriptomicsepigeneticsdifferentialexpressiongeneexpressiondnamethylationexperimenthubsoftwaredataimportbioconductor
2.0 match 5.02 score 2 scripts
january3
tagcloud:Tag Clouds
Generating Tag and Word Clouds.
Maintained by January Weiner. Last updated 5 years ago.
2.0 match 4.98 score 23 scripts 7 dependents
ellessenne
KMunicate:KMunicate-Style Kaplan–Meier Plots
Produce Kaplan–Meier plots in the style recommended following the KMunicate study by Morris et al. (2019) <doi:10.1136/bmjopen-2019-030215>. The KMunicate style consists of Kaplan-Meier curves with confidence intervals to quantify uncertainty and an extended risk table (per treatment arm) depicting the number of study subjects at risk, events, and censored observations over time. The resulting plots are built using 'ggplot2' and can be further customised to a certain extent, including themes, fonts, and colour scales.
Maintained by Alessandro Gasparini. Last updated 10 months ago.
2.0 match 7 stars 4.89 score 11 scripts
epe-gov-br
epe4md:EPE's 4MD model to forecast the adoption of Distributed Generation and Behind-the-meter energy storage
EPE's 4MD model to forecast the adoption of Distributed Generation and Behind-the-meter energy storage
Maintained by Gabriel Konzen. Last updated 5 days ago.
1.7 match 18 stars 5.56 score 5 scripts
mlopez-ibanez
eaf:Plots of the Empirical Attainment Function
Computation and visualization of the empirical attainment function (EAF) for the analysis of random sets in multi-criterion optimization. M. López-Ibáñez, L. Paquete, and T. Stützle (2010) <doi:10.1007/978-3-642-02538-9_9>.
Maintained by Manuel López-Ibáñez. Last updated 7 months ago.
eafeaf-differencesepsilonhypervolumeinverted-generational-distancemultiobjective-optimizationsummary-attainment-surfacesvisualizationgsl
1.7 match 17 stars 5.31 score 32 scripts 1 dependentsbioc
QSutils:Quasispecies Diversity
Set of utility functions for viral quasispecies analysis with NGS data. Most functions are equally useful for metagenomic studies. There are three main types: (1) data manipulation and exploration—functions useful for converting reads to haplotypes and frequencies, repairing reads, intersecting strand haplotypes, and visualizing haplotype alignments. (2) diversity indices—functions to compute diversity and entropy, in which incidence, abundance, and functional indices are considered. (3) data simulation—functions useful for generating random viral quasispecies data.
Maintained by Mercedes Guerrero-Murillo. Last updated 5 months ago.
softwaregeneticsdnaseqgeneticvariabilitysequencingalignmentsequencematchingdataimport
1.6 match 5.56 score 8 scripts 1 dependentsleonawicz
lcars:LCARS Aesthetic for Shiny
Provides Shiny widgets and theme that support a 'Library Computer Access/Retrieval System' (LCARS) aesthetic for Shiny apps. The package also includes functions for adding a minimal LCARS theme to static 'ggplot2' graphs. More details about LCARS can be found at <https://en.wikipedia.org/wiki/LCARS>.
Maintained by Matthew Leonawicz. Last updated 6 months ago.
1.5 match 70 stars 5.54 score 9 scripts
bayesball
ProbBayes:Probability and Bayesian Modeling
Functions and datasets to accompany J. Albert and J. Hu, "Probability and Bayesian Modeling", CRC Press, (2019, ISBN: 1138492566).
Maintained by Jim Albert. Last updated 4 years ago.
1.9 match 5 stars 4.30 score 80 scripts
da-wi
cartographr:Crafting Print-Ready Maps and Layered Visualizations
Simplifying the creation of print-ready maps, this package offers a user-friendly interface derived from 'ggplot2' for handling OpenStreetMap data. It streamlines the map-making process, allowing users to focus on the story their maps tell. Transforming raw geospatial data into informative visualizations is made easy with simple features 'sf' geometries. Whether for urban planning, environmental studies, or impactful public presentations, this tool facilitates straightforward and effective map creation. Enhance the dissemination of spatial information with high-quality, narrative-driven visualizations!
Maintained by David Willinger. Last updated 9 months ago.
1.8 match 1 stars 4.48 score 2 scripts
nucleic-acid
namedropR:Create Visual Citations for Presentations and Posters
Provides 'visual citations' containing the metadata of a scientific paper and a 'QR' code. A 'visual citation' is a banner containing title, authors, journal and year of a publication. This package can create such banners based on 'BibTeX' and 'BibLaTeX' references or call the reference metadata from 'Crossref'-API. The banners include a QR code pointing to the 'DOI'. The resulting HTML object or PNG image can be included in a presentation to point the audience to good resources for further reading. Styling is possible via predefined designs or via custom 'CSS'. This package is not intended as replacement for proper reference manager packages, but a tool to enrich scientific presentation slides and conference posters.
Maintained by Christian A. Gebhard. Last updated 2 years ago.
1.3 match 61 stars 6.44 score 8 scripts
openplantpathology
hagis:Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity
Analysis of plant pathogen pathotype survey data. Functions provided calculate distribution of susceptibilities, distribution of complexities with statistics, pathotype frequency distribution, as well as diversity indices for pathotypes. This package is meant to be a direct replacement for Herrmann, Löwer and Schachtel's (1999) <doi:10.1046/j.1365-3059.1999.00325.x> Habgood-Gilmour Spreadsheet, 'HaGiS', previously used for pathotype analysis.
Maintained by Adam H. Sparks. Last updated 11 days ago.
plant-pathologypathotypepathogen-surveyvirulence analysisdifferential setassessment scalepathotype-complexitiesplant-diseasepopulation-diversities
1.5 match 1 stars 5.26 score 8 scripts
tanguybarthelemy
TBox:Useful Functions for Programming and Generating Documents
Tools to help developers and producers manipulate R objects and outputs. It includes tools for displaying results and objects, and for formatting them in the correct format.
Maintained by Tanguy Barthelemy. Last updated 1 months ago.
1.9 match 4.00 score
wa-department-of-agriculture
soils:Visualize and Report Soil Health Data
Collection of soil health data visualization and reporting tools, including a RStudio project template with everything you need to generate custom HTML and Microsoft Word reports for each participant in your soil health sampling project.
Maintained by Jadey N Ryan. Last updated 1 months ago.
1.3 match 11 stars 5.74 score 9 scriptsbioc
SBGNview:"SBGNview: Data Analysis, Integration and Visualization on SBGN Pathways"
SBGNview is a tool set for pathway based data visalization, integration and analysis. SBGNview is similar and complementary to the widely used Pathview, with the following key features: 1. Pathway definition by the widely adopted Systems Biology Graphical Notation (SBGN); 2. Supports multiple major pathway databases beyond KEGG (Reactome, MetaCyc, SMPDB, PANTHER, METACROP) and user defined pathways; 3. Covers 5,200 reference pathways and over 3,000 species by default; 4. Extensive graphics controls, including glyph and edge attributes, graph layout and sub-pathway highlight; 5. SBGN pathway data manipulation, processing, extraction and analysis.
Maintained by Weijun Luo. Last updated 5 months ago.
genetargetpathwaysgraphandnetworkvisualizationgenesetenrichmentdifferentialexpressiongeneexpressionmicroarrayrnaseqgeneticsmetabolomicsproteomicssystemsbiologysequencing
1.1 match 26 stars 6.23 score 22 scripts
matt-dray
quartostamp:RStudio Addin to Insert Quarto Helpers
An RStudio Addin to insert ('stamp') pre-written classes and divs into your Quarto documents.
Maintained by Matt Dray. Last updated 2 years ago.
hacktoberfestquartorstudio-addin
2.0 match 59 stars 3.47 scoreropensci
pdftools:Text Extraction, Rendering and Converting of PDF Documents
Utilities based on 'libpoppler' <https://poppler.freedesktop.org> for extracting text, fonts, attachments and metadata from a PDF file. Also supports high quality rendering of PDF documents into PNG, JPEG, TIFF format, or into raw bitmap vectors for further processing in R.
Maintained by Jeroen Ooms. Last updated 13 days ago.
pdf-filespdf-formatpdftoolspopplerpoppler-librarytext-extractioncpp
0.5 match 529 stars 13.10 score 3.3k scripts 47 dependents
ashipunov
shipunov:Miscellaneous Functions from Alexey Shipunov
A collection of functions for data manipulation, plotting and statistical computing, to use separately or with the book "Visual Statistics. Use R!": Shipunov (2020) <http://ashipunov.info/shipunov/software/r/r-en.htm>. Dr Alexey Shipunov died in December 2022. Most useful functions: Bclust(), Jclust() and BootA() which bootstrap hierarchical clustering; Recode() which does multiple recoding in a fast, simple and flexible way; Misclass() which outputs confusion matrix even if classes are not concerted; Overlap() which measures group separation on any projection; Biarrows() which converts any scatterplot into biplot; and Pleiad() which is fast and flexible correlogram.
Maintained by ORPHANED. Last updated 2 years ago.
6.8 match 1.00 score 9 scripts
helenkettle
microPop:Process-Based Modelling of Microbial Populations
Modelling interacting microbial populations - example applications include human gut microbiota, rumen microbiota and phytoplankton. Solves a system of ordinary differential equations to simulate microbial growth and resource uptake over time. This version contains network visualisation functions.
Maintained by Helen Kettle. Last updated 3 years ago.
2.5 match 2.64 score 11 scripts
dschuhmacher
kanjistat:A Statistical Framework for the Analysis of Japanese Kanji Characters
Various tools and data sets that support the study of kanji, including their morphology, decomposition and concepts of distance and similarity between them.
Maintained by Dominic Schuhmacher. Last updated 9 months ago.
1.3 match 4 stars 4.90 score 6 scriptstrevorld
oblicubes:3D Rendering Using Obliquely Projected Cubes and Cuboids
Three-dimensional rendering for 'grid' and 'ggplot2' graphics using cubes and cuboids drawn with an oblique projection. As a special case also supports primary view orthographic projections. Can be viewed as an extension to the 'isocubes' package <https://github.com/coolbutuseless/isocubes>.
Maintained by Trevor L. Davis. Last updated 6 days ago.
1.3 match 22 stars 5.04 score
craig-parylo
plotor:Produces an Odds Ratio Plot from a Logistic Regression Model
Produces an Odds Ratio (OR) Plot to visualise the result of a logistic regression analysis. Provide it with a binomial regression model produced by 'glm()' and it will convert the estimates to odds ratios with a 95% confidence interval and plot the results using 'ggplot2'.
Maintained by Craig Parylo. Last updated 3 hours ago.
ggplot2glmlogistic-regressionodds-ratio
1.3 match 2 stars 5.04 score 7 scripts
rameshram96
visvaR:Shiny-Based Statistical Solutions for Agricultural Research
Visualize Variance is an intuitive 'shiny' applications tailored for agricultural research data analysis, including one-way and two-way analysis of variance, correlation, and other essential statistical tools. Users can easily upload their datasets, perform analyses, and download the results as a well-formatted document, streamlining the process of data analysis and reporting in agricultural research.The experimental design methods are based on classical work by Fisher (1925) and Scheffe (1959). The correlation visualization approaches follow methods developed by Wei & Simko (2021) and Friendly (2002) <doi:10.1198/000313002533>.
Maintained by Ramesh Ramasamy. Last updated 4 months ago.
agricultureanova-analysiscorrelationexperexperimentalexperimental-design
1.7 match 3.54 score 6 scripts
insileco
graphicsutils:Collection of graphics utilities
A collection of functions to easily customize graphics-based plots.
Maintained by Kevin Cazelles. Last updated 3 years ago.
1.5 match 4 stars 3.90 score 20 scriptswa-department-of-agriculture
washi:Washington Soil Health Initiative Branding
Create plots and tables in a consistent style with WaSHI (Washington Soil Health Initiative) branding. Use 'washi' to easily style your 'ggplot2' plots and 'flextable' tables.
Maintained by Jadey Ryan. Last updated 1 years ago.
1.8 match 3 stars 3.18 score 2 scripts
drmowinckels
uiothemes:Branding themes for the University of Oslo, Norway
Contains templates, themeing files and functions. Made specifically for branding purposes for the University of Oslo.
Maintained by Athanasia Mo Mowinckel. Last updated 4 years ago.
2.0 match 14 stars 2.85 score 2 scripts
capro-uio
uiothemes:Branding themes for the University of Oslo, Norway
Contains templates, themeing files and functions. Made specifically for branding purposes for the University of Oslo.
Maintained by Athanasia Mo Mowinckel. Last updated 4 years ago.
2.0 match 14 stars 2.85 score 2 scripts
fweber144
shinybrms:Graphical User Interface ('shiny' App) for 'brms'
A graphical user interface (GUI) for fitting Bayesian regression models using the package 'brms' which in turn relies on 'Stan' (<https://mc-stan.org/>). The 'shinybrms' GUI is a 'shiny' app.
Maintained by Frank Weber. Last updated 11 months ago.
bayesbayesianbayesian-data-analysisbayesian-inferencebayesian-statisticsbrmscmdstanrguimcmcrstanshinyshiny-appstanstatistical-analysisstatistical-inferencestatistical-modelsstatistics
1.5 match 10 stars 3.70 score 3 scripts
danielvartan
brandr:Brand Identity Management Using brand.yml Standard
A system to facilitate brand identity management using the brand.yml standard, providing functions to consistently access and apply brand colors, typography, and other visual elements across your R projects.
Maintained by Daniel Vartanian. Last updated 6 days ago.
brand-identitybrand-managementbrand-ymlbrandingbranding-toolscolor-palettescolor-schemesproject-themingr-programmingtypographyvisual-assetsvisual-identity
1.9 match 3.00 score
jolars
rmdplugr:Plugins for R Markdown Formats
Formats for R Markdown that undo modifications by 'pandoc' and 'rmarkdown' to original 'latex' templates, such as smaller margins, paragraph spacing, and compact titles. In addition, enhancements such as author blocks with affiliations and headers and footers are introduced. All of this functionality is built around plugins that modify the default 'pandoc' template without relying on custom templates.
Maintained by Johan Larsson. Last updated 5 years ago.
1.5 match 3.70 score 1 scripts
lightbridge-ks
thaipdf:R Markdown to PDF in Thai Language
Provide R Markdown templates and LaTeX preamble which are necessary for creating PDF from R Markdown documents in Thai language.
Maintained by Kittipos Sirivongrungson. Last updated 3 years ago.
latex-templatepdf-documentrmarkdownthaithai-language
1.3 match 5 stars 4.40 score 1 scripts
lcbc-uio
lcbcr:LCBC brand package
Functions and setups with brand styling and lab general setups.
Maintained by Athanasia Mo Mowinckel. Last updated 3 years ago.
1.8 match 3.00 score 2 scripts
nilspetras
IPV:Item Pool Visualization
Generate plots based on the Item Pool Visualization concept for latent constructs. Item Pool Visualizations are used to display the conceptual structure of a set of items (self-report or psychometric). Dantlgraber, Stieger, & Reips (2019) <doi:10.1177/2059799119884283>.
Maintained by Nils Petras. Last updated 2 years ago.
1.3 match 2 stars 4.00 score 3 scripts
mariushofert
simsalapar:Tools for Simulation Studies in Parallel
Tools for setting up ("design"), conducting, and evaluating large-scale simulation studies with graphics and tables, including parallel computations.
Maintained by Marius Hofert. Last updated 2 years ago.
1.8 match 2 stars 2.91 score 67 scripts 2 dependents
wjschne
WJSmisc:Miscellaneous functions from W. Joel Schneider
Several functions I find useful.
Maintained by W. Joel Schneider. Last updated 2 years ago.
1.7 match 5 stars 2.40 score 10 scripts
uribo
suryulib:Shinya Uryu's Personal R Packages
More about what it does (maybe more than one line) Use four spaces when indenting paragraphs within the Description.
Maintained by Shinya Uryu. Last updated 2 years ago.
2.3 match 1.70 score
elipousson
idmlr:Read InDesign Markup Language (IDML) Files
Read InDesign Markup Language (IDML) Files into R. Additional functions to modify and write IDML files may be added in the future.
Maintained by Eli Pousson. Last updated 6 months ago.
1.8 match 3 stars 2.18 score 2 scriptseddelbuettel
tinythemes:Lightweight Repackaging of 'Themes' for 'ggplot2'
Themes for 'ggplot2' are a convenient way to style plots. The 'hrbrthemes' package contains a particularly nice one, but brings along a significant tail of dependencies. So this (currently experimental) package brings along just the 'theme_ipsum_rc' theme using the 'Roboto' 'Condensed' font. Should the font not be installed on your system, see the help in the package 'hrbrthemes' on how to install 'Roboto Condensed'.
Maintained by Dirk Eddelbuettel. Last updated 2 months ago.
0.8 match 29 stars 4.64 score 1 scripts
txwri
twriTemplates:Templates for TWRI reports
Provides word and pdf Rmarkdown templates that meet TWRI branding guidance.
Maintained by Michael Schramm. Last updated 1 years ago.
2.0 match 1.78 score 12 scripts
brandmaier
ggx:A Natural Language Interface to 'ggplot2'
The 'ggplot2' package is the state-of-the-art toolbox for creating and formatting graphs. However, it is easy to forget how certain formatting commands are named and sometimes users find themselves asking: How do you rotate the x-axis labels again? Or how do you hide the legend...? This package allows users to issue natural language commands related to theme-related styling of plots (colors, font size and such), which then are translated into valid 'ggplot2' commands.
Maintained by Andreas M. Brandmaier. Last updated 2 years ago.
0.5 match 152 stars 6.69 score 16 scripts
meztez
rapidoc:Generates 'RapiDoc' Documentation from an 'OpenAPI' Specification
A collection of 'HTML', 'JavaScript', 'CSS' and fonts assets that generate 'RapiDoc' documentation from an 'OpenAPI' Specification: <https://mrin9.github.io/RapiDoc/>.
Maintained by Bruno Tremblay. Last updated 1 years ago.
0.5 match 15 stars 6.10 score 114 scripts 3 dependents
kjohnsson
intrinsicDimension:Intrinsic Dimension Estimation
A variety of methods for estimating intrinsic dimension of data sets (i.e the manifold or Hausdorff dimension of the support of the distribution that generated the data) as reviewed in Johnsson, K. (2016, ISBN:978-91-7623-921-6) and Johnsson, K., Soneson, C. and Fontes, M. (2015) <doi:10.1109/TPAMI.2014.2343220>. Furthermore, to evaluate the performance of these estimators, functions for generating data sets with given intrinsic dimensions are provided.
Maintained by Kerstin Johnsson. Last updated 6 years ago.
0.5 match 12 stars 6.03 score 59 scripts 1 dependents
tanho63
tantastic:Fun and Shiny and Pretty Functions
A personal package of R functions, ggplot themes, and other miscellany.
Maintained by Tan Ho. Last updated 10 months ago.
1.8 match 1 stars 1.70 score 5 scripts
rafael-ayala
NutrienTrackeR:Food Composition Information and Dietary Assessment
Provides a tool set for food information and dietary assessment. It uses food composition data from several reference databases, including: 'USDA' (United States), 'CIQUAL' (France), 'BEDCA' (Spain), 'CNF' (Canada) and 'STFCJ' (Japan). 'NutrienTrackeR' calculates the intake levels for both macronutrient and micronutrients, and compares them with the recommended dietary allowances (RDA). It includes a number of visualization tools, such as time series plots of nutrient intake, and pie-charts showing the main foods contributing to the intake level of a given nutrient. A shiny app exposing the main functionalities of the package is also provided.
Maintained by Rafael Ayala. Last updated 2 years ago.
1.3 match 2.18 score 15 scripts
luisdva
forgts:Convert Formatted Spreadsheets to Presentation-Ready Display Tables
Reads cell contents plus formatting from a spreadsheet file and creates an editable 'gt' object with the same data and formatting. Supports the most commonly-used cell and text styles including colors, fills, font weights and decorations, and borders.
Maintained by Luis D. Verde Arregoitia. Last updated 1 months ago.
0.5 match 18 stars 5.56 score 3 scripts
mlverse
tabulate:Pretty Console Output for Tables
Generates pretty console output for tables allowing for full customization of cell colors, font type, borders and many others attributes. It also supports 'multibyte' characters and nested tables.
Maintained by Daniel Falbel. Last updated 3 years ago.
0.5 match 39 stars 5.29 score 33 scripts
marinasams
KarsTS:An Interface for Microclimate Time Series Analysis
An R code with a GUI for microclimate time series, with an emphasis on underground environments. 'KarsTS' provides linear and nonlinear methods, including recurrence analysis (Marwan et al. (2007) <doi:10.1016/j.physrep.2006.11.001>) and filling methods (Moffat et al. (2007) <doi:10.1016/j.agrformet.2007.08.011>), as well as tools to manipulate easily time series and gap sets.
Maintained by Marina Saez. Last updated 4 years ago.
1.9 match 1.38 score 24 scripts
kurthornik
Rpoppler:PDF Tools Based on Poppler
PDF tools based on the Poppler PDF rendering library. See <http://poppler.freedesktop.org/> for more information on Poppler.
Maintained by Kurt Hornik. Last updated 7 months ago.
2.0 match 1.26 score 8 scriptslgnbhl
gotop:Scroll Back to Top Icon in Shiny and R Markdown
Add a scroll back to top 'Font Awesome' icon <https://fontawesome.com/> in 'rmarkdown' documents and 'shiny' apps thanks to 'jQuery GoTop' <https://scottdorman.blog/jquery-gotop/>.
Maintained by Félix Luginbuhl. Last updated 6 months ago.
0.5 match 16 stars 4.20 score 7 scriptsmeztez
redoc:Generates 'Redoc' Documentation from an 'OpenAPI' Specification
A collection of 'HTML', 'JavaScript', 'CSS' and fonts assets that generate 'Redoc' documentation from an 'OpenAPI' Specification: <https://redocly.com/redoc/>.
Maintained by Bruno Tremblay. Last updated 1 years ago.
0.5 match 9 stars 4.11 score 27 scripts
jacobpstein
usaidplot:Make Graphs with US Agency for International Development Colors
Automatically apply the United States Agency for International Development's color palette and fonts for either discrete or continuous variables.
Maintained by Jacob Patterson-Stein. Last updated 5 months ago.
0.5 match 3 stars 3.82 score 11 scripts
grantmcdermott
lecturenotes:My lecture notes Rmd template
Template for exporting to both HTML and PDF formats. Takes care of various annoyances like missing affiliation headings for PDF, handling of non-standard fonts, correct parsing of interactive content depending on the output format, etc.
Maintained by Grant McDermott. Last updated 3 years ago.
0.5 match 124 stars 3.79 score
schweflo
pdfminer:Read Portable Document Format (PDF) Files
Provides an interface to 'PDFMiner' <https://github.com/pdfminer/pdfminer.six> a 'Python' package for extracting information from 'PDF'-files. 'PDFMiner' has the goal to get all information available in a 'PDF'-file, position of the characters, font type, font size and informations about lines. Which makes it the perfect starting point for extracting tables from 'PDF'-files. More information can be found in the package 'README'-file.
Maintained by Florian Schwendinger. Last updated 5 years ago.
0.8 match 1.70 score 4 scripts
sidoruvigo
calendR:Ready to Print Monthly and Yearly Calendars Made with 'ggplot2'
Contains the function calendR() for creating fully customizable monthly and yearly calendars (colors, fonts, formats, ...) and even heatmap calendars. In addition, it allows saving the calendars in ready to print A4 format PDF files.
Maintained by José Carlos Soage González. Last updated 1 years ago.
0.5 match 2.46 score 97 scripts 1 dependents
barryzee
clickableImageMap:Implement 'tableGrob' Object as a Clickable Image Map
Implement 'tableGrob' object as a clickable image map. The 'clickableImageMap' package is designed to be more convenient and more configurable than the edit() function. Limitations that I have encountered with edit() are cannot control (1) positioning (2) size (3) appearance and formatting of fonts In contrast, when the table is implemented as a 'tableGrob', all of these features are controllable. In particular, the 'ggplot2' grid system allows exact positioning of the table relative to other graphics etc.
Maintained by Barry Zeeberg. Last updated 10 months ago.
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