Showing 16 of total 16 results (show query)
cran4linux
rspm:'RStudio' Package Manager
Enables binary package installations on Linux distributions. Provides access to 'RStudio' public repositories at <https://packagemanager.posit.co>, and transparent management of system requirements without administrative privileges. Currently supported distributions are 'CentOS' / 'RHEL' 7-9, and several 'RHEL' derivatives ('Rocky Linux', 'AlmaLinux', 'Oracle Linux', and 'Amazon Linux'), 'openSUSE' / 'SLES' 15.4-5, 'Debian' 11-12, and 'Ubuntu' LTS 20-22.
Maintained by Iñaki Ucar. Last updated 5 months ago.
automationcentospackagesrhelubuntu
11.5 match 47 stars 5.34 score 4 scripts
ropensci
RSelenium:R Bindings for 'Selenium WebDriver'
Provides a set of R bindings for the 'Selenium 2.0 WebDriver' (see <https://www.selenium.dev/documentation/> for more information) using the 'JsonWireProtocol' (see <https://github.com/SeleniumHQ/selenium/wiki/JsonWireProtocol> for more information). 'Selenium 2.0 WebDriver' allows driving a web browser natively as a user would either locally or on a remote machine using the Selenium server it marks a leap forward in terms of web browser automation. Selenium automates web browsers (commonly referred to as browsers). Using RSelenium you can automate browsers locally or remotely.
Maintained by Jonathan Völkle. Last updated 2 years ago.
3.7 match 344 stars 13.38 score 1.9k scripts 12 dependents
r-dbi
odbc:Connect to ODBC Compatible Databases (using the DBI Interface)
A DBI-compatible interface to ODBC databases.
Maintained by Hadley Wickham. Last updated 13 days ago.
1.3 match 396 stars 16.22 score 2.9k scripts 22 dependents
rstudio
shinythemes:Themes for Shiny
Themes for use with Shiny. Includes several Bootstrap themes from <https://bootswatch.com/>, which are packaged for use with Shiny applications.
Maintained by Winston Chang. Last updated 3 years ago.
1.5 match 155 stars 13.06 score 8.5k scripts 124 dependents
r-spatial
link2GI:Linking Geographic Information Systems, Remote Sensing and Other Command Line Tools
Functions and tools for using open GIS and remote sensing command-line interfaces in a reproducible environment.
Maintained by Chris Reudenbach. Last updated 4 months ago.
2.2 match 26 stars 9.05 score 78 scripts 1 dependents
bioc
DESeq2:Differential gene expression analysis based on the negative binomial distribution
Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.
Maintained by Michael Love. Last updated 11 days ago.
sequencingrnaseqchipseqgeneexpressiontranscriptionnormalizationdifferentialexpressionbayesianregressionprincipalcomponentclusteringimmunooncologyopenblascpp
1.2 match 375 stars 16.11 score 17k scripts 115 dependents
davidasmith
wordler:The 'WORDLE' Game
The 'Wordle' game. Players have six attempts to guess a five-letter word. After each guess, the player is informed which letters in their guess are either: anywhere in the word; in the right position in the word. This can be used to inform the next guess. Can be played interactively in the console, or programmatically. Based on Josh Wardle's game <https://www.powerlanguage.co.uk/wordle/>.
Maintained by David Smith. Last updated 3 years ago.
3.6 match 5 stars 4.40 score 7 scripts
pachadotdev
analogsea:Interface to 'DigitalOcean'
Provides a set of functions for interacting with the 'DigitalOcean' API <https://www.digitalocean.com/>, including creating images, destroying them, rebooting, getting details on regions, and available images.
Maintained by Mauricio Vargas. Last updated 2 years ago.
1.9 match 159 stars 7.56 score 100 scripts 1 dependents
nx10
unigd:Universal Graphics Device
A unified R graphics backend. Render R graphics fast and easy to many common file formats. Provides a thread safe 'C' interface for asynchronous rendering of R graphics.
Maintained by Florian Rupprecht. Last updated 1 days ago.
1.3 match 23 stars 8.07 score 6 scripts 2 dependents
otoliths
rfishdraw:Procedurally Generated Fish Drawings Via Javascript
Procedurally generated fish drawings via ggplot2 based on fishdraw JavaScript library <https://github.com/LingDong-/fishdraw>.
Maintained by Liuyong Ding. Last updated 1 years ago.
2.2 match 6 stars 4.48 score 3 scripts
hassanpazira
BFI:Bayesian Federated Inference
The Bayesian Federated Inference ('BFI') method combines inference results obtained from local data sets in the separate centers. In this version of the package, the 'BFI' methodology is programmed for linear, logistic and survival regression models. For GLMs, see Jonker, Pazira and Coolen (2024) <doi:10.1002/sim.10072>; for survival models, see Pazira, Massa, Weijers, Coolen and Jonker (2024) <doi:10.48550/arXiv.2404.17464>; and for heterogeneous populations, see Jonker, Pazira and Coolen (2024) <doi:10.48550/arXiv.2402.02898>.
Maintained by Hassan Pazira. Last updated 22 days ago.
2.0 match 2 stars 4.78 score 6 scripts
scholaempirica
reschola:The Schola Empirica Package
A collection of utilies, themes and templates for data analysis at Schola Empirica.
Maintained by Jan Netík. Last updated 5 months ago.
1.7 match 4 stars 4.83 score 14 scripts
leef-uzh
LEEF:Data Package Containing Only Data and Data Information
Setup package for the LEEF pipeline which loads / installs all necessary packages and functions to run the pipeline.
Maintained by Rainer M. Krug. Last updated 3 years ago.
data-analysisdata-processingleef
2.5 match 2.95 scorebioc
SVMDO:Identification of Tumor-Discriminating mRNA Signatures via Support Vector Machines Supported by Disease Ontology
It is an easy-to-use GUI using disease information for detecting tumor/normal sample discriminating gene sets from differentially expressed genes. Our approach is based on an iterative algorithm filtering genes with disease ontology enrichment analysis and wilk and wilks lambda criterion connected to SVM classification model construction. Along with gene set extraction, SVMDO also provides individual prognostic marker detection. The algorithm is designed for FPKM and RPKM normalized RNA-Seq transcriptome datasets.
Maintained by Mustafa Erhan Ozer. Last updated 5 months ago.
genesetenrichmentdifferentialexpressionguiclassificationrnaseqtranscriptomicssurvivalmachine-learningrna-seqshiny
1.3 match 4.60 score 2 scripts
eddelbuettel
chshli:Check Shared Libraries
R packages can be downloaded from a repository for the 'RStudio Package Manager' or 'RSPM' which provides prebuilt binaries for several Linux distributions easing installing considerably. However, these packages do not have system level support for their run-time dependencies. This packages aims to address this shortcoming with a first application for Ubuntu 18.04 aka 'bionic'.
Maintained by Dirk Eddelbuettel. Last updated 5 years ago.
0.5 match 1 stars 1.70 score 1 scripts