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grunwaldlab
poppr:Genetic Analysis of Populations with Mixed Reproduction
Population genetic analyses for hierarchical analysis of partially clonal populations built upon the architecture of the 'adegenet' package. Originally described in Kamvar, Tabima, and Grünwald (2014) <doi:10.7717/peerj.281> with version 2.0 described in Kamvar, Brooks, and Grünwald (2015) <doi:10.3389/fgene.2015.00208>.
Maintained by Zhian N. Kamvar. Last updated 11 months ago.
clonalitygenetic-analysisgenetic-distancesminimum-spanning-networksmultilocus-genotypesmultilocus-lineagespopulation-geneticspopulationsopenmp
69 stars 10.84 score 672 scripts
sumidu
gghilbertstrings:A Fast 'ggplot2'-Based Implementation of Hilbert Curves
A set of functions that help to create plots based on Hilbert curves. Hilbert curves are used to map one dimensional data into the 2D plane. The package provides a function that generate a 2D coordinate from an integer position. As a specific use case the package provides a function that allows mapping a character column in a data frame into 2D space using 'ggplot2'. This allows visually comparing long lists of URLs, words, genes or other data that has a fixed order and position.
Maintained by André Calero Valdez. Last updated 4 years ago.
genetic-analysisggplothilbert-curvesurlcpp
16 stars 4.20 score 20 scripts