Showing 4 of total 4 results (show query)
ianjonsen
aniMotum:Fit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Changes in Animal Movement
Fits continuous-time random walk, correlated random walk and move persistence state-space models for location estimation and behavioural inference from animal tracking data ('Argos', processed light-level 'geolocation', 'GPS'). Template Model Builder ('TMB') is used for fast random-effects estimation. The 'Argos' data can be: (older) least squares-based locations; (newer) Kalman filter-based locations with error ellipse information; or a mixture of both. The models estimate two sets of location states corresponding to: 1) each observation, which are (usually) irregularly timed; and 2) user-specified time intervals (regular or irregular). A track re-routing function is provided to adjust location estimates for known movement barriers. Track simulation functions are provided. Latent variable models are also provided to estimate move persistence from track data not requiring state-space model filtering.
Maintained by Ian Jonsen. Last updated 13 hours ago.
animal-movementanimal-trackingrandom-effects-modelstate-space-modelstmbcpp
39 stars 7.11 score 59 scripts
mhpob
otndo:Understand your OTN data
This package provides functions to summarize the various type of OTN-style data.
Maintained by Michael OBrien. Last updated 21 days ago.
animal-trackingbiotelemetryfishfisheriesvisualization
4 stars 4.92 score 6 scripts 1 dependents
inbo
etn:Access Data from the European Tracking Network
Package with functions to access and process data from the European Tracking Network hosted by VLIZ.
Maintained by Pieter Huybrechts. Last updated 2 months ago.
animal-movementanimal-trackingbiologgingdata-accessfishlifewatchoscibio
8 stars 4.15 score 14 scriptsmhpob
matos:Interface with the Mid-Atlantic Acoustic Telemetry Observing System (MATOS)
This package provides HTML-scaping functions to interact with the MATOS website (https://matos.asascience.com/), allowing aggregation of data and the downloading and posting of files.
Maintained by Michael OBrien. Last updated 3 months ago.
animal-trackingapiapi-wrapperbiotelemetryfishfisheriesfisheries-research
3 stars 4.13 score 9 scripts