Showing 87 of total 87 results (show query)
jeromeecoac
seewave:Sound Analysis and Synthesis
Functions for analysing, manipulating, displaying, editing and synthesizing time waves (particularly sound). This package processes time analysis (oscillograms and envelopes), spectral content, resonance quality factor, entropy, cross correlation and autocorrelation, zero-crossing, dominant frequency, analytic signal, frequency coherence, 2D and 3D spectrograms and many other analyses. See Sueur et al. (2008) <doi:10.1080/09524622.2008.9753600> and Sueur (2018) <doi:10.1007/978-3-319-77647-7>.
Maintained by Jerome Sueur. Last updated 1 years ago.
29.9 match 18 stars 8.88 score 880 scripts 23 dependents
langenbergstefan
sound:A Sound Interface for R
Basic functions for dealing with wav files and sound samples.
Maintained by Stefan Langenberg. Last updated 1 years ago.
67.2 match 3.79 score 124 scripts
marce10
warbleR:Streamline Bioacoustic Analysis
Functions aiming to facilitate the analysis of the structure of animal acoustic signals in 'R'. 'warbleR' makes use of the basic sound analysis tools from the packages 'tuneR' and 'seewave', and offers new tools for explore and quantify acoustic signal structure. The package allows to organize and manipulate multiple sound files, create spectrograms of complete recordings or individual signals in different formats, run several measures of acoustic structure, and characterize different structural levels in acoustic signals.
Maintained by Marcelo Araya-Salas. Last updated 2 months ago.
animal-acoustic-signalsaudio-processingbioacousticsspectrogramstreamline-analysiscpp
22.1 match 54 stars 11.01 score 270 scripts 4 dependents
ropensci
baRulho:Quantifying (Animal) Sound Degradation
Intended to facilitate acoustic analysis of (animal) sound propagation experiments, which typically aim to quantify changes in signal structure when transmitted in a given habitat by broadcasting and re-recording animal sounds at increasing distances. The package offers a workflow with functions to prepare the data set for analysis as well as to calculate and visualize several degradation metrics, including blur ratio, signal-to-noise ratio, excess attenuation and envelope correlation among others (Dabelsteen et al 1993 <doi:10.1121/1.406682>).
Maintained by Marcelo Araya-Salas. Last updated 24 days ago.
acoustic-signalsanimalbehaviorbioacoustics
35.7 match 7 stars 6.72 score 18 scriptsropensci
ohun:Optimizing Acoustic Signal Detection
Facilitates the automatic detection of acoustic signals, providing functions to diagnose and optimize the performance of detection routines. Detections from other software can also be explored and optimized. This package has been peer-reviewed by rOpenSci. Araya-Salas et al. (2022) <doi:10.1101/2022.12.13.520253>.
Maintained by Marcelo Araya-Salas. Last updated 5 months ago.
audio-processingbioacousticssound-event-detectionspectrogramstreamline-analysis
24.9 match 14 stars 6.78 score 24 scripts 1 dependentsmarce10
Rraven:Connecting R and 'Raven' Sound Analysis Software
A tool to exchange data between R and 'Raven' sound analysis software (Cornell Lab of Ornithology). Functions work on data formats compatible with the R package 'warbleR'.
Maintained by Marcelo Araya-Salas. Last updated 2 months ago.
27.9 match 10 stars 6.00 score 50 scripts
cran
soundgen:Sound Synthesis and Acoustic Analysis
Performs parametric synthesis of sounds with harmonic and noise components such as animal vocalizations or human voice. Also offers tools for audio manipulation and acoustic analysis, including pitch tracking, spectral analysis, audio segmentation, pitch and formant shifting, etc. Includes four interactive web apps for synthesizing and annotating audio, manually correcting pitch contours, and measuring formant frequencies. Reference: Anikin (2019) <doi:10.3758/s13428-018-1095-7>.
Maintained by Andrey Anikin. Last updated 2 months ago.
30.3 match 1 stars 4.86 score 110 scripts 2 dependents
bczernecki
climate:Interface to Download Meteorological (and Hydrological) Datasets
Automatize downloading of meteorological and hydrological data from publicly available repositories: OGIMET (<http://ogimet.com/index.phtml.en>), University of Wyoming - atmospheric vertical profiling data (<http://weather.uwyo.edu/upperair/>), Polish Institute of Meteorology and Water Management - National Research Institute (<https://danepubliczne.imgw.pl>), and National Oceanic & Atmospheric Administration (NOAA). This package also allows for searching geographical coordinates for each observation and calculate distances to the nearest stations.
Maintained by Bartosz Czernecki. Last updated 10 days ago.
climateclimate-dataimgwmeteorological-datameteorologynoaa-dataogimetsounding
15.8 match 88 stars 7.61 score 38 scripts
benrenard
sequenceR:A Simple Sequencer for Data Sonification
A rudimentary sequencer to define, manipulate and mix sound samples. The underlying motivation is to sonify data, as demonstrated in the blog <https://globxblog.github.io/>, the presentation by Renard and Le Bescond (2022, <https://hal.science/hal-03710340v1>) or the poster by Renard et al. (2023, <https://hal.inrae.fr/hal-04388845v1>).
Maintained by Benjamin Renard. Last updated 2 months ago.
22.9 match 3 stars 5.13 score 15 scripts
rasmusab
beepr:Easily Play Notification Sounds on any Platform
The main function of this package is beep(), with the purpose to make it easy to play notification sounds on whatever platform you are on. It is intended to be useful, for example, if you are running a long analysis in the background and want to know when it is ready.
Maintained by Rasmus Bรฅรฅth. Last updated 8 months ago.
9.2 match 208 stars 11.63 score 2.8k scripts 74 dependentsbczernecki
thunder:Computation and Visualisation of Atmospheric Convective Parameters
Allow to compute and visualise convective parameters commonly used in the operational prediction of severe convective storms. Core algorithm is based on a highly optimized 'C++' code linked into 'R' via 'Rcpp'. Highly efficient engine allows to derive thermodynamic and kinematic parameters from large numerical datasets such as reanalyses or operational Numerical Weather Prediction models in a reasonable amount of time. Package has been developed since 2017 by research meteorologists specializing in severe thunderstorms. The most relevant methods used in the package based on the following publications Stipanuk (1973) <https://apps.dtic.mil/sti/pdfs/AD0769739.pdf>, McCann et al. (1994) <doi:10.1175/1520-0434(1994)009%3C0532:WNIFFM%3E2.0.CO;2>, Bunkers et al. (2000) <doi:10.1175/1520-0434(2000)015%3C0061:PSMUAN%3E2.0.CO;2>, Corfidi et al. (2003) <doi:10.1175/1520-0434(2003)018%3C0997:CPAMPF%3E2.0.CO;2>, Showalter (1953) <doi:10.1175/1520-0477-34.6.250>, Coffer et al. (2019) <doi:10.1175/WAF-D-19-0115.1>, Gropp and Davenport (2019) <doi:10.1175/WAF-D-17-0150.1>, Czernecki et al. (2019) <doi:10.1016/j.atmosres.2019.05.010>, Taszarek et al. (2020) <doi:10.1175/JCLI-D-20-0346.1>, Sherburn and Parker (2014) <doi:10.1175/WAF-D-13-00041.1>, Romanic et al. (2022) <doi:10.1016/j.wace.2022.100474>.
Maintained by Bartosz Czernecki. Last updated 12 months ago.
capecinconvective-parametersdownload-soundinghodographrawinsondesevere-weatherthundertornadocpp
16.2 match 44 stars 6.30 score 7 scripts
rhedley
locaR:A Set of Tools for Sound Localization
A set of functions and tools to conduct acoustic source localization, as well as organize and check localization data and results. The localization functions implement the modified steered response power algorithm described by Cobos et al. (2010) <doi:10.1109/LSP.2010.2091502>.
Maintained by Richard Hedley. Last updated 2 years ago.
20.6 match 1 stars 4.78 score 24 scriptsmarce10
NatureSounds:Animal Sounds for Bioacustic Analysis
Collection of example animal sounds for bioacoustic analysis.
Maintained by Marcelo Araya-Salas. Last updated 2 years ago.
16.5 match 2 stars 5.52 score 22 scripts 5 dependents
projectmosaic
mosaicCalc:R-Language Based Calculus Operations for Teaching
Software to support the introductory *MOSAIC Calculus* textbook <https://www.mosaic-web.org/MOSAIC-Calculus/>), one of many data- and modeling-oriented educational resources developed by Project MOSAIC (<https://www.mosaic-web.org/>). Provides symbolic and numerical differentiation and integration, as well as support for applied linear algebra (for data science), and differential equations/dynamics. Includes grammar-of-graphics-based functions for drawing vector fields, trajectories, etc. The software is suitable for general use, but intended mainly for teaching calculus.
Maintained by Daniel Kaplan. Last updated 20 days ago.
10.0 match 13 stars 8.68 score 546 scripts
edwbaker
sonicscrewdriver:Bioacoustic Analysis and Publication Tools
Provides tools for manipulating sound files for bioacoustic analysis, and preparing analyses these for publication. The package validates that values are physically possible wherever feasible.
Maintained by Ed Baker. Last updated 1 months ago.
11.4 match 6 stars 7.12 score 26 scripts
p-rocha
SoundShape:Sound Waves Onto Morphometric Data
Implement a promising, and yet little explored protocol for bioacoustical analysis, the eigensound method by MacLeod, Krieger and Jones (2013) <doi:10.4404/hystrix-24.1-6299>. Eigensound is a multidisciplinary method focused on the direct comparison between stereotyped sounds from different species. 'SoundShape', in turn, provide the tools required for anyone to go from sound waves to Principal Components Analysis, using tools extracted from traditional bioacoustics (i.e. 'tuneR' and 'seewave' packages), geometric morphometrics (i.e. 'geomorph' package) and multivariate analysis (e.g. 'stats' package). For more information, please see Rocha and Romano (2021) and check 'SoundShape' repository on GitHub for news and updates <https://github.com/p-rocha/SoundShape>.
Maintained by Pedro Rocha. Last updated 6 months ago.
15.3 match 9 stars 4.73 score 12 scripts
santiagobarreda
phonTools:Tools for Phonetic and Acoustic Analyses
Contains tools for the organization, display, and analysis of the sorts of data frequently encountered in phonetics research and experimentation, including the easy creation of IPA vowel plots, and the creation and manipulation of WAVE audio files.
Maintained by Santiago Barreda. Last updated 1 years ago.
11.0 match 4 stars 6.21 score 157 scripts 7 dependents
dankelley
oce:Analysis of Oceanographic Data
Supports the analysis of Oceanographic data, including 'ADCP' measurements, measurements made with 'argo' floats, 'CTD' measurements, sectional data, sea-level time series, coastline and topographic data, etc. Provides specialized functions for calculating seawater properties such as potential temperature in either the 'UNESCO' or 'TEOS-10' equation of state. Produces graphical displays that conform to the conventions of the Oceanographic literature. This package is discussed extensively by Kelley (2018) "Oceanographic Analysis with R" <doi:10.1007/978-1-4939-8844-0>.
Maintained by Dan Kelley. Last updated 1 days ago.
4.0 match 146 stars 15.42 score 4.2k scripts 18 dependents
winvector
vtreat:A Statistically Sound 'data.frame' Processor/Conditioner
A 'data.frame' processor/conditioner that prepares real-world data for predictive modeling in a statistically sound manner. 'vtreat' prepares variables so that data has fewer exceptional cases, making it easier to safely use models in production. Common problems 'vtreat' defends against: 'Inf', 'NA', too many categorical levels, rare categorical levels, and new categorical levels (levels seen during application, but not during training). Reference: "'vtreat': a data.frame Processor for Predictive Modeling", Zumel, Mount, 2016, <DOI:10.5281/zenodo.1173313>.
Maintained by John Mount. Last updated 2 months ago.
categorical-variablesmachine-learning-algorithmsnested-modelsprepare-data
5.1 match 285 stars 11.19 score 328 scripts 1 dependentscran
sonar:Fundamental Formulas for Sonar
Formulas for calculating sound velocity, water pressure, depth, density, absorption and sonar equations.
Maintained by Jose Gama. Last updated 9 years ago.
53.4 match 1.00 score
teos-10
gsw:Gibbs Sea Water Functions
Provides an interface to the Gibbs 'SeaWater' ('TEOS-10') C library, version 3.06-16-0 (commit '657216dd4f5ea079b5f0e021a4163e2d26893371', dated 2022-10-11, available at <https://github.com/TEOS-10/GSW-C>, which stems from 'Matlab' and other code written by members of Working Group 127 of 'SCOR'/'IAPSO' (Scientific Committee on Oceanic Research / International Association for the Physical Sciences of the Oceans).
Maintained by Dan Kelley. Last updated 8 days ago.
gibbsoceanographyseawaterteos-10
6.3 match 8 stars 8.53 score 286 scripts 19 dependentscran
TSA:Time Series Analysis
Contains R functions and datasets detailed in the book "Time Series Analysis with Applications in R (second edition)" by Jonathan Cryer and Kung-Sik Chan.
Maintained by Kung-Sik Chan. Last updated 3 years ago.
10.1 match 2 stars 4.47 score 5 dependents
ljvillanueva
soundecology:Soundscape Ecology
Functions to calculate indices for soundscape ecology and other ecology research that uses audio recordings.
Maintained by Luis J. Villanueva-Rivera. Last updated 6 years ago.
7.9 match 24 stars 5.53 score 95 scriptsmarce10
dynaSpec:Dynamic Spectrogram Visualizations
A set of tools to generate dynamic spectrogram visualizations in video format.
Maintained by Marcelo Araya-Salas. Last updated 16 days ago.
animal-soundsbioacousticsspectrogram
7.5 match 23 stars 5.50 score 34 scripts
shivaway
IAPWS95:Thermophysical Properties of Water and Steam
Functions for Water and Steam Properties based on the International Association for the Properties of Water (IAPWS) Formulation 1995 for the Thermodynamic Properties of Ordinary Water Substance for General and Scientific Use and on the releases for viscosity, conductivity, surface tension and melting pressure.
Maintained by Shawn Way. Last updated 2 years ago.
7.1 match 4.76 score 116 scriptscran
bioSNR:Bioacoustic Basic Operations with Decibels and the Passive Sonar Equation
A beginners toolbox to help those in ecology who want to deepen their understanding or utilize Bioacoustics in their work. The package has a number of utilizations from calculating frequency from waveform, performing operations in dB, and determining acoustic range of recorders. The majority of this package is based on key concepts learned from the K. Lisa Yang Center for Conservation Bioacoustics at Cornell University and their associated course: Introduction to Bioacoustics course. More information can be found within the walk through vignettes at <https://github.com/MattyD797/bioSNR/tree/main/vignettes>.
Maintained by Matthew Duggan. Last updated 2 years ago.
10.4 match 3.18 score
hturner
BradleyTerry2:Bradley-Terry Models
Specify and fit the Bradley-Terry model, including structured versions in which the parameters are related to explanatory variables through a linear predictor and versions with contest-specific effects, such as a home advantage.
Maintained by Heather Turner. Last updated 6 years ago.
bradley-terry-modelspaired-comparisonsstatistical-models
3.4 match 20 stars 7.97 score 172 scripts 1 dependentscran
eba:Elimination-by-Aspects Models
Fitting and testing multi-attribute probabilistic choice models, especially the Bradley-Terry-Luce (BTL) model (Bradley & Terry, 1952 <doi:10.1093/biomet/39.3-4.324>; Luce, 1959), elimination-by-aspects (EBA) models (Tversky, 1972 <doi:10.1037/h0032955>), and preference tree (Pretree) models (Tversky & Sattath, 1979 <doi:10.1037/0033-295X.86.6.542>).
Maintained by Florian Wickelmaier. Last updated 4 years ago.
11.3 match 1.95 score 30 scripts 1 dependents
blue-matter
SAMtool:Stock Assessment Methods Toolkit
Simulation tools for closed-loop simulation are provided for the 'MSEtool' operating model to inform data-rich fisheries. 'SAMtool' provides a conditioning model, assessment models of varying complexity with standardized reporting, model-based management procedures, and diagnostic tools for evaluating assessments inside closed-loop simulation.
Maintained by Quang Huynh. Last updated 20 days ago.
3.3 match 3 stars 6.49 score 36 scripts 1 dependents
cvoeten
buildmer:Stepwise Elimination and Term Reordering for Mixed-Effects Regression
Finds the largest possible regression model that will still converge for various types of regression analyses (including mixed models and generalized additive models) and then optionally performs stepwise elimination similar to the forward and backward effect-selection methods in SAS, based on the change in log-likelihood or its significance, Akaike's Information Criterion, the Bayesian Information Criterion, the explained deviance, or the F-test of the change in Rยฒ.
Maintained by Cesko C. Voeten. Last updated 1 years ago.
3.5 match 5.82 score 200 scriptsropensci
phonfieldwork:Linguistic Phonetic Fieldwork Tools
There are a lot of different typical tasks that have to be solved during phonetic research and experiments. This includes creating a presentation that will contain all stimuli, renaming and concatenating multiple sound files recorded during a session, automatic annotation in 'Praat' TextGrids (this is one of the sound annotation standards provided by 'Praat' software, see Boersma & Weenink 2020 <https://www.fon.hum.uva.nl/praat/>), creating an html table with annotations and spectrograms, and converting multiple formats ('Praat' TextGrid, 'ELAN', 'EXMARaLDA', 'Audacity', subtitles '.srt', and 'FLEx' flextext). All of these tasks can be solved by a mixture of different tools (any programming language has programs for automatic renaming, and Praat contains scripts for concatenating and renaming files, etc.). 'phonfieldwork' provides a functionality that will make it easier to solve those tasks independently of any additional tools. You can also compare the functionality with other packages: 'rPraat' <https://CRAN.R-project.org/package=rPraat>, 'textgRid' <https://CRAN.R-project.org/package=textgRid>.
Maintained by George Moroz. Last updated 8 months ago.
audacityeafelanexbexmaraldafieldworkflextextphoneticsphonologypraatsrt-subtitlestextgrid
3.0 match 20 stars 6.68 score 20 scripts
rsund
survo.audio:Sound support for Survo R
Provides sound-API for Survo R.
Maintained by Reijo Sund. Last updated 10 months ago.
7.7 match 3 stars 2.48 scorecran
NADA:Nondetects and Data Analysis for Environmental Data
Contains methods described by Dennis Helsel in his book "Nondetects And Data Analysis: Statistics for Censored Environmental Data".
Maintained by Lopaka Lee. Last updated 5 years ago.
3.4 match 2 stars 5.48 score 118 scripts 14 dependentsljvillanueva
pumilioR:Pumilio in R
R package to query and get data out of a Pumilio sound archive system (http://ljvillanueva.github.io/pumilio/).
Maintained by Luis J. Villanueva-Rivera. Last updated 11 years ago.
4.4 match 2 stars 4.00 score 7 scripts
fcharte
mldr.datasets:R Ultimate Multilabel Dataset Repository
Large collection of multilabel datasets along with the functions needed to export them to several formats, to make partitions, and to obtain bibliographic information.
Maintained by David Charte. Last updated 6 years ago.
3.5 match 8 stars 4.68 score 120 scripts
kjhealy
gssrdoc:Document General Social Survey Variable
The General Social Survey (GSS) is a long-running, mostly annual survey of US households. It is administered by the National Opinion Research Center (NORC). This package contains the a tibble with information on the survey variables, together with every variable documented as an R help page. For more information on the GSS see \url{http://gss.norc.org}.
Maintained by Kieran Healy. Last updated 11 months ago.
7.1 match 2.28 score 38 scripts
david6marsh
himach:Find Routes for Supersonic Aircraft
For supersonic aircraft, flying subsonic over land, find the best route between airports. Allow for coastal buffer and potentially closed regions. Use a minimal model of aircraft performance: the focus is on time saved versus subsonic flight, rather than on vertical flight profile. For modelling and forecasting, not for planning your flight!
Maintained by David Marsh. Last updated 1 years ago.
3.6 match 1 stars 4.00 score 7 scriptscran
monitoR:Acoustic Template Detection in R
Acoustic template detection and monitoring database interface. Create, modify, save, and use templates for detection of animal vocalizations. View, verify, and extract results. Upload a MySQL schema to a existing instance, manage survey metadata, write and read templates and detections locally or to the database.
Maintained by Sasha D. Hafner. Last updated 7 years ago.
3.5 match 3 stars 3.95 score 5 dependents
cysouw
qlcVisualize:Visualization for Quantitative Language Comparison
Collection of visualizations as used in quantitative language comparison. Currently implemented are visualisations dealing nominal data with multiple levels ("level map" and "factor map"), and assistance for making weighted geographical Voronoi-maps ("weighted map").
Maintained by Michael Cysouw. Last updated 6 months ago.
3.4 match 4.03 score 24 scripts
matrix-profile-foundation
tsmp:Time Series with Matrix Profile
A toolkit implementing the Matrix Profile concept that was created by CS-UCR <http://www.cs.ucr.edu/~eamonn/MatrixProfile.html>.
Maintained by Francisco Bischoff. Last updated 3 years ago.
algorithmmatrix-profilemotif-searchtime-seriescpp
1.8 match 72 stars 7.29 score 179 scripts 1 dependents
kaz-yos
regmedint:Regression-Based Causal Mediation Analysis with Interaction and Effect Modification Terms
This is an extension of the regression-based causal mediation analysis first proposed by Valeri and VanderWeele (2013) <doi:10.1037/a0031034> and Valeri and VanderWeele (2015) <doi:10.1097/EDE.0000000000000253>). It supports including effect measure modification by covariates(treatment-covariate and mediator-covariate product terms in mediator and outcome regression models) as proposed by Li et al (2023) <doi:10.1097/EDE.0000000000001643>. It also accommodates the original 'SAS' macro and 'PROC CAUSALMED' procedure in 'SAS' when there is no effect measure modification. Linear and logistic models are supported for the mediator model. Linear, logistic, loglinear, Poisson, negative binomial, Cox, and accelerated failure time (exponential and Weibull) models are supported for the outcome model.
Maintained by Yi Li. Last updated 1 years ago.
causal-inferencemediation-analysis
1.9 match 29 stars 6.84 score 40 scripts
ashbaldry
howler:'Shiny' Extension of 'howler.js'
Audio interactivity within 'shiny' applications using 'howler.js'. Enables the status of the audio player to be sent from the UI to the server, and events such as playing and pausing the audio can be triggered from the server.
Maintained by Ashley Baldry. Last updated 10 months ago.
2.3 match 16 stars 5.68 score 30 scripts
dlivsey
realTimeloads:Analyte Flux and Load from Estimates of Concentration and Discharge
Flux (mass per unit time) and Load (mass) are computed from timeseries estimates of analyte concentration and discharge. Concentration timeseries are computed from regression between surrogate and user-provided analyte. Uncertainty in calculations is estimated using bootstrap resampling. Code for the processing of acoustic backscatter from horizontally profiling acoustic Doppler current profilers is provided. All methods detailed in Livsey et al (2020) <doi:10.1007/s12237-020-00734-z>, Livsey et al (2023) <doi:10.1029/2022WR033982>, and references therein.
Maintained by Daniel Livsey. Last updated 1 years ago.
3.4 match 1 stars 3.70 score 7 scripts
r-forge
tuneR:Analysis of Music and Speech
Analyze music and speech, extract features like MFCCs, handle wave files and their representation in various ways, read mp3, read midi, perform steps of a transcription, ... Also contains functions ported from the 'rastamat' 'Matlab' package.
Maintained by Uwe Ligges. Last updated 11 months ago.
1.5 match 7.84 score 1.1k scripts 44 dependents
jamesmartherus
drumr:Turn R into a Drum Machine
Includes various functions for playing drum sounds. beat() plays a drum sound from one of the six included drum kits. tempo() sets spacing between calls to beat() in bpm. Together the two functions can be used to create many different drum patterns.
Maintained by James Martherus. Last updated 5 years ago.
2.8 match 35 stars 4.24 score 3 scripts
taikisan21
PAMmisc:Miscellaneous Functions for Passive Acoustic Analysis
A collection of miscellaneous functions for passive acoustics. Much of the content here is adapted to R from code written by other people. If you have any ideas of functions to add, please contact Taiki Sakai.
Maintained by Taiki Sakai. Last updated 23 days ago.
1.9 match 4 stars 5.88 score 42 scripts 2 dependents
briandconnelly
pushoverr:Send Push Notifications using 'Pushover'
Send push notifications to mobile devices or the desktop using 'Pushover' <https://pushover.net>. These notifications can display things such as results, job status, plots, or any other text or numeric data.
Maintained by Brian Connelly. Last updated 3 years ago.
notificationspush-notificationspushover
1.8 match 71 stars 6.29 score 55 scripts
sieste
sonify:Data Sonification - Turning Data into Sound
Sonification (or audification) is the process of representing data by sounds in the audible range. This package provides the R function sonify() that transforms univariate data, sampled at regular or irregular intervals, into a continuous sound with time-varying frequency. The ups and downs in frequency represent the ups and downs in the data. Sonify provides a substitute for R's plot function to simplify data analysis for the visually impaired.
Maintained by Stefan Siegert. Last updated 8 years ago.
3.8 match 2.90 score 66 scripts 4 dependents
matt-dray
remorse:Translate Text to Morse to Sound
Converts a string input to Morse Code and back. Plays the Morse Code as audible dits and dahs (dots and dashes).
Maintained by Matt Dray. Last updated 2 years ago.
5.0 match 3 stars 2.18 scoretaikisan21
PAMscapes:Tools for Summarising and Analysing Soundscape Data
A variety of tools relevant to the analysis of marine soundscape data. There are tools for downloading AIS (automatic identification system) data from Marine Cadastre <https://hub.marinecadastre.gov>, connecting AIS data to GPS coordinates, plotting summaries of various soundscape measurements, and downloading relevant environmental variables (wind, swell height) from the National Center for Atmospheric Research data server <https://rda.ucar.edu/datasets/ds084.1/>. Most tools were developed to work well with output from 'Triton' software, but can be adapted to work with any similar measurements.
Maintained by Taiki Sakai. Last updated 2 days ago.
1.9 match 8 stars 5.34 score 22 scripts
ropenstats
RSQL:Database Agnostic Package to Generate and Process 'SQL' Queries in R
Allows the user to generate and execute select, insert, update and delete 'SQL' queries the underlying database without having to explicitly write 'SQL' code.
Maintained by Alejandro Baranek. Last updated 2 years ago.
1.9 match 8 stars 5.23 score 21 scripts
landesbergn
rhymer:Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words
Wrapper for 'Datamuse' API to find rhyming and other associated words. This includes words of similar meaning, spelling, or other related words. Learn more about the 'Datamuse' API here <https://www.datamuse.com/api/>.
Maintained by Noah Landesberg. Last updated 2 years ago.
1.8 match 27 stars 5.43 score 20 scripts
anthonypileggi
casino:Play Casino Games
Play casino games in the R console, including poker, blackjack, and a slot machine. Try to build your fortune before you succumb to the gambler's ruin!
Maintained by Anthony Pileggi. Last updated 6 years ago.
2.0 match 10 stars 4.81 score 13 scripts
karlines
marelac:Tools for Aquatic Sciences
Datasets, constants, conversion factors, and utilities for 'MArine', 'Riverine', 'Estuarine', 'LAcustrine' and 'Coastal' science. The package contains among others: (1) chemical and physical constants and datasets, e.g. atomic weights, gas constants, the earths bathymetry; (2) conversion factors (e.g. gram to mol to liter, barometric units, temperature, salinity); (3) physical functions, e.g. to estimate concentrations of conservative substances, gas transfer and diffusion coefficients, the Coriolis force and gravity; (4) thermophysical properties of the seawater, as from the UNESCO polynomial or from the more recent derivation based on a Gibbs function.
Maintained by Karline Soetaert. Last updated 1 years ago.
2.0 match 4.63 score 119 scripts 4 dependents
denis-arnold
AcousticNDLCodeR:Coding Sound Files for Use with NDL
Make acoustic cues to use with the R packages 'ndl' or 'ndl2'. The package implements functions used in the PLoS ONE paper: Denis Arnold, Fabian Tomaschek, Konstantin Sering, Florence Lopez, and R. Harald Baayen (2017). Words from spontaneous conversational speech can be recognized with human-like accuracy by an error-driven learning algorithm that discriminates between meanings straight from smart acoustic features, bypassing the phoneme as recognition unit. PLoS ONE 12(4):e0174623 <doi:10.1371/journal.pone.0174623> More details can be found in the paper and the supplement. 'ndl' is available on CRAN. 'ndl2' is available by request from <konstantin.sering@uni-tuebingen.de>.
Maintained by Denis Arnold. Last updated 7 years ago.
3.0 match 3.00 score 8 scripts
framverse
pssp:Package to interface with the WDFW Puget Sound sampling database
The pssp package serves as an interface between R and the Puget Sound sampling database. It"s goal is to ease the burden of retrieving and analyzing sport creel information in Puget Sound.
Maintained by Ty Garber. Last updated 4 months ago.
3.7 match 2.40 score
jtagusari
shinyHugePlot:Efficient Plotting of Large-Sized Data
A tool to plot data with a large sample size using 'shiny' and 'plotly'. Relatively small samples are obtained from the original data using a specific algorithm. The samples are updated according to a user-defined x range. Jonas Van Der Donckt, Jeroen Van Der Donckt, Emiel Deprost (2022) <https://github.com/predict-idlab/plotly-resampler>.
Maintained by Junta Tagusari. Last updated 6 months ago.
3.6 match 4 stars 2.30 score 3 scriptsropensci
googleLanguageR:Call Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API
Call 'Google Cloud' machine learning APIs for text and speech tasks. Call the 'Cloud Translation' API <https://cloud.google.com/translate/> for detection and translation of text, the 'Natural Language' API <https://cloud.google.com/natural-language/> to analyse text for sentiment, entities or syntax, the 'Cloud Speech' API <https://cloud.google.com/speech/> to transcribe sound files to text and the 'Cloud Text-to-Speech' API <https://cloud.google.com/text-to-speech/> to turn text into sound files.
Maintained by Mark Edmondson. Last updated 8 months ago.
cloud-speech-apicloud-translation-apigoogle-api-clientgoogle-cloudgoogle-cloud-speechgoogle-nlpgoogleauthrnatural-language-processingpeer-reviewedsentiment-analysisspeech-apitranslation-api
0.8 match 196 stars 10.36 score 268 scripts 3 dependents
coffeemuggler
eseis:Environmental Seismology Toolbox
Environmental seismology is a scientific field that studies the seismic signals, emitted by Earth surface processes. This package provides all relevant functions to read/write seismic data files, prepare, analyse and visualise seismic data, and generate reports of the processing history.
Maintained by Michael Dietze. Last updated 4 months ago.
1.8 match 9 stars 4.42 score 58 scriptsframverse
framrsquared:FRAM Database Interface
A convenient tool for interfacing with FRAM access databases in R environments.
Maintained by Ty Garber. Last updated 2 months ago.
1.6 match 6 stars 5.06 score 9 scriptscran
DCchoice:Analyzing Dichotomous Choice Contingent Valuation Data
Functions for analyzing dichotomous choice contingent valuation (CV) data. It provides functions for estimating parametric and nonparametric models for single-, one-and-one-half-, and double-bounded CV data. For details, see Aizaki et al. (2022) <doi:10.1007/s42081-022-00171-1>.
Maintained by Hideo Aizaki. Last updated 2 years ago.
3.6 match 1 stars 2.18 score 31 scripts 1 dependents
rogiersbart
rui:A simple set of UI functions
This package provides a wrapper around different cli and usethis functions, aiming at providing a small but consistent set of verbs to construct a simple R package UI.
Maintained by Bart Rogiers. Last updated 9 months ago.
2.3 match 3.48 score 2 dependents
coolbutuseless
carelesswhisper:Automatic Speech Recognition using Whisper.cpp
Wrapper for whisper.cpp to perform automatic speech recognition.
Maintained by mikefc. Last updated 2 years ago.
1.7 match 57 stars 3.45 score 4 scripts
jrosell
jrrosell:Personal R package for Jordi Rosell
Useful functions for personal usage.
Maintained by Jordi Rosell. Last updated 3 months ago.
1.8 match 2 stars 3.08 score 7 scripts
katilingban
ppitables:Lookup Tables to Generate Poverty Likelihoods and Rates using the Poverty Probability Index (PPI)
The Poverty Probability Index (PPI) is a poverty measurement tool for organizations and businesses with a mission to serve the poor. The PPI is statistically-sound, yet simple to use: the answers to 10 questions about a household's characteristics and asset ownership are scored to compute the likelihood that the household is living below the poverty line - or above by only a narrow margin. This package contains country-specific lookup data tables used as reference to determine the poverty likelihood of a household based on their score from the country-specific PPI questionnaire. These lookup tables have been extracted from documentation of the PPI found at <https://www.povertyindex.org> and managed by Innovations for Poverty Action <https://poverty-action.org/>.
Maintained by Ernest Guevarra. Last updated 3 days ago.
datapovertypoverty-likelihoodspoverty-probabilityppi
0.5 match 6 stars 6.43 score 89 scripts
bbtomas
rPraat:Interface to Praat
Read, write and manipulate 'Praat' TextGrid, PitchTier, Pitch, IntensityTier, Formant, Sound, and Collection files <https://www.fon.hum.uva.nl/praat/>.
Maintained by Tomas Boril. Last updated 3 years ago.
0.5 match 29 stars 6.13 score 156 scripts 2 dependents
omega1x
wsif97:Industrial Formulation for Properties of Ordinary Water and Steam
Implementation of some methods for fast calculation of thermophysical properties of ordinary water and steam as they formulated by International Association for the Properties of Water and Steam (IAPWS).
Maintained by Yuri Possokhov. Last updated 1 years ago.
enthalpyentropyheat-capacityiapwssaturationsteamwatercpp
1.8 match 1.70 score
mrc-ide
odin.dust:Compile Odin to Dust
Less painful than it sounds, this package compiles an odin model to use dust, our new stochastic model system. Supports only a subset of odin models (discrete time stochastic models with no interpolation and no delays).
Maintained by Rich FitzJohn. Last updated 6 months ago.
0.5 match 3 stars 5.71 score 122 scripts
matthewgerber
SensusR:Sensus Analytics
Provides access and analytic functions for Sensus data.
Maintained by Matthew S. Gerber. Last updated 6 years ago.
2.0 match 1.48 score 30 scriptscran
lmviz:A Package to Visualize Linear Models Features and Play with Them
Contains a suite of shiny applications meant to explore linear model inference feature through simulation and games.
Maintained by Francesco Pauli. Last updated 5 years ago.
1.7 match 1.70 score
psolymos
bSims:Agent-Based Bird Point Count Simulator
A highly scientific and utterly addictive bird point count simulator to test statistical assumptions, aid survey design, and have fun while doing it (Solymos 2024 <doi:10.1007/s42977-023-00183-2>). The simulations follow time-removal and distance sampling models based on Matsuoka et al. (2012) <doi:10.1525/auk.2012.11190>, Solymos et al. (2013) <doi:10.1111/2041-210X.12106>, and Solymos et al. (2018) <doi:10.1650/CONDOR-18-32.1>, and sound attenuation experiments by Yip et al. (2017) <doi:10.1650/CONDOR-16-93.1>.
Maintained by Peter Solymos. Last updated 10 months ago.
biasbirdsdetectabilityshinysimulationsurvey-design
0.5 match 4 stars 5.36 score 38 scripts
dylanpieper
hellmer:Batch Processing for Chat Models
Batch processing framework for 'ellmer' chat model interactions. Enables sequential and parallel processing of chat completions. Core capabilities include error handling with backoff, state persistence, progress tracking, and retry management. Parallel processing is implemented via the 'future' framework. Additional features include structured data extraction, tool integration, timeout handling, verbosity control, and sound notifications. Includes methods for returning chat texts, chat objects, progress status, and structured data.
Maintained by Dylan Pieper. Last updated 2 days ago.
batchbatch-processingellmerllm
0.5 match 6 stars 5.18 score
bioc
MatrixQCvis:Shiny-based interactive data-quality exploration for omics data
Data quality assessment is an integral part of preparatory data analysis to ensure sound biological information retrieval. We present here the MatrixQCvis package, which provides shiny-based interactive visualization of data quality metrics at the per-sample and per-feature level. It is broadly applicable to quantitative omics data types that come in matrix-like format (features x samples). It enables the detection of low-quality samples, drifts, outliers and batch effects in data sets. Visualizations include amongst others bar- and violin plots of the (count/intensity) values, mean vs standard deviation plots, MA plots, empirical cumulative distribution function (ECDF) plots, visualizations of the distances between samples, and multiple types of dimension reduction plots. Furthermore, MatrixQCvis allows for differential expression analysis based on the limma (moderated t-tests) and proDA (Wald tests) packages. MatrixQCvis builds upon the popular Bioconductor SummarizedExperiment S4 class and enables thus the facile integration into existing workflows. The package is especially tailored towards metabolomics and proteomics mass spectrometry data, but also allows to assess the data quality of other data types that can be represented in a SummarizedExperiment object.
Maintained by Thomas Naake. Last updated 5 months ago.
visualizationshinyappsguiqualitycontroldimensionreductionmetabolomicsproteomicstranscriptomics
0.5 match 4.74 score 4 scripts
alekoure
europeanaR:Interact with Metadata Records and Media on the Europeana Repository
Interact with the Europeana Data Model via a variety of API endpoints that contains digital collections from thousands of institutions around Europe. This translates to millions of Cultural Heritage Objects in the form of image, text, video, sound and 3D, accompanied by rich metadata. The Data Model design principles are based on the core principles and best practices of the Semantic Web and Linked Data efforts to which Europeana contributes (see, e.g., Doerr, Martin, et al. The europeana data model (edm). World Library and Information Congress: 76th IFLA general conference and assembly. Vol. 10. 2010.). The package also provides methods for bulk downloads of specific subsets of items, including both their metadata and their associated media files.
Maintained by Alexandros Kouretsis. Last updated 3 years ago.
0.5 match 5 stars 4.40 score 4 scripts
arpapiemonte
OpeNoise:Environmental Noise Pollution Data Analysis
Provides analyse, interpret and understand noise pollution data. Data are typically regular time series measured with sound meter. The package is partially described in Fogola, Grasso, Masera and Scordino (2023, <DOI:10.61782/fa.2023.0063>).
Maintained by Pasquale Scordino. Last updated 4 months ago.
0.5 match 2 stars 3.48 score 5 scriptscran
randomizeR:Randomization for Clinical Trials
This tool enables the user to choose a randomization procedure based on sound scientific criteria. It comprises the generation of randomization sequences as well the assessment of randomization procedures based on carefully selected criteria. Furthermore, 'randomizeR' provides a function for the comparison of randomization procedures.
Maintained by Ralf-Dieter Hilgers. Last updated 1 years ago.
0.5 match 2 stars 3.38 score 1 dependents
dswatson
cbl:Causal Discovery under a Confounder Blanket
Methods for learning causal relationships among a set of foreground variables X based on signals from a (potentially much larger) set of background variables Z, which are known non-descendants of X. The confounder blanket learner (CBL) uses sparse regression techniques to simultaneously perform many conditional independence tests, with complementary pairs stability selection to guarantee finite sample error control. CBL is sound and complete with respect to a so-called "lazy oracle", and works with both linear and nonlinear systems. For details, see Watson & Silva (2022) <arXiv:2205.05715>.
Maintained by David Watson. Last updated 2 years ago.
0.5 match 2 stars 3.00 score
jacobnabe
DEPONS2R:Read, Plot and Analyse Output from the DEPONS Model
Methods for analyzing population dynamics and movement tracks simulated using the DEPONS model <https://www.depons.eu> (v.3.0), for manipulating input raster files, shipping routes and for analyzing sound propagated from ships.
Maintained by Jacob Nabe-Nielsen. Last updated 2 months ago.
agent-based-modelingenvironmental-modellingmarine-biology
0.5 match 2.85 score 4 scripts
frankiethull
alertr:Function for ALERTing
Plays the infamous ALERT sound from Metal Gear Solid Franchise. Place this function within a loop (or apply) to let you know when the routine is complete, or, has an issue.
Maintained by Frank Hull. Last updated 3 months ago.
0.5 match 2.00 score
jdgonzalezwork
tetrascatt:Acoustic Scattering for Complex Shapes by Using the DWBA
Uses the Distorted Wave Born Approximation (DWBA) to compute the acoustic backward scattering, the geometry of the object is formed by a volumetric mesh, composed of tetrahedrons. This computation is done efficiently through an analytical 3D integration that allows for a solution which is expressed in terms of elementary functions for each tetrahedron. It is important to note that this method is only valid for objects whose acoustic properties, such as density and sound speed, do not vary significantly compared to the surrounding medium. (See Lavia, Cascallares and Gonzalez, J. D. (2023). TetraScatt model: Born approximation for the estimation of acoustic dispersion of fluid-like objects of arbitrary geometries. arXiv preprint <arXiv:2312.16721>).
Maintained by Juan Domingo Gonzalez. Last updated 1 years ago.
0.5 match 2.00 score 5 scripts
tkcaccia
musicNMR:Conversion of Nuclear Magnetic Resonance Spectra in Audio Files
A collection of functions for converting and visualization the free induction decay of mono dimensional nuclear magnetic resonance (NMR) spectra into an audio file. It facilitates the conversion of Bruker datasets in files WAV. The sound of NMR signals could provide an alternative to the current representation of the individual metabolic fingerprint and supply equally significant information. The package includes also NMR spectra of the urine samples provided by four healthy donors. Based on Cacciatore S, Saccenti E, Piccioli M. Hypothesis: the sound of the individual metabolic phenotype? Acoustic detection of NMR experiments. OMICS. 2015;19(3):147-56. <doi:10.1089/omi.2014.0131>.
Maintained by Stefano Cacciatore. Last updated 1 years ago.
0.8 match 1.00 score 4 scripts
rokblagus
abe:Augmented Backward Elimination
Performs augmented backward elimination and checks the stability of the obtained model. Augmented backward elimination combines significance or information based criteria with the change in estimate to either select the optimal model for prediction purposes or to serve as a tool to obtain a practically sound, highly interpretable model. More details can be found in Dunkler et al. (2014) <doi:10.1371/journal.pone.0113677>.
Maintained by Rok Blagus. Last updated 7 years ago.
0.5 match 1.26 score 18 scripts