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bioc
RCyjs:Display and manipulate graphs in cytoscape.js
Interactive viewing and exploration of graphs, connecting R to Cytoscape.js, using websockets.
Maintained by Paul Shannon. Last updated 5 months ago.
visualizationgraphandnetworkthirdpartyclient
59.1 match 4.68 score 48 scripts
tinnlab
RCPA:Consensus Pathway Analysis
Provides a set of functions to perform pathway analysis and meta-analysis from multiple gene expression datasets, as well as visualization of the results. This package wraps functionality from the following packages: Ritchie et al. (2015) <doi:10.1093/nar/gkv007>, Love et al. (2014) <doi:10.1186/s13059-014-0550-8>, Robinson et al. (2010) <doi:10.1093/bioinformatics/btp616>, Korotkevich et al. (2016) <arxiv:10.1101/060012>, Efron et al. (2015) <https://CRAN.R-project.org/package=GSA>, and Gu et al. (2012) <https://CRAN.R-project.org/package=CePa>.
Maintained by Ha Nguyen. Last updated 4 months ago.
biobasedeseq2geoqueryedgerlimmarcyjsfgseabrowservizsummarizedexperimentannotationdbirontotools
10.0 match 1 stars 5.50 score 70 scripts