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tomeriko96
polyglotr:Translate Text
Provide easy methods to translate pieces of text. Functions send requests to translation services online.
Maintained by Tomer Iwan. Last updated 1 months ago.
google-translategoogletranslatelanguagelingueemymemory-apimymemorytranslatorponstranslationtranslations-api
13.6 match 33 stars 7.61 score 34 scripts 1 dependents
bioc
cfdnakit:Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA)
This package provides basic functions for analyzing shallow whole-genome sequencing (~0.3X or more) of cell-free DNA (cfDNA). The package basically extracts the length of cfDNA fragments and aids the vistualization of fragment-length information. The package also extract fragment-length information per non-overlapping fixed-sized bins and used it for calculating ctDNA estimation score (CES).
Maintained by Pitithat Puranachot. Last updated 5 months ago.
copynumbervariationsequencingwholegenome
7.4 match 8 stars 5.20 score 8 scripts
speakeasy-2
speakeasyR:Fast and Robust Multi-Scale Graph Clustering
A graph community detection algorithm that aims to be performant on large graphs and robust, returning consistent results across runs. SpeakEasy 2 (SE2), the underlying algorithm, is described in Chris Gaiteri, David R. Connell & Faraz A. Sultan et al. (2023) <doi:10.1186/s13059-023-03062-0>. The core algorithm is written in 'C', providing speed and keeping the memory requirements low. This implementation can take advantage of multiple computing cores without increasing memory usage. SE2 can detect community structure across scales, making it a good choice for biological data, which often has hierarchical structure. Graphs can be passed to the algorithm as adjacency matrices using base 'R' matrices, the 'Matrix' library, 'igraph' graphs, or any data that can be coerced into a matrix.
Maintained by David Connell. Last updated 5 months ago.
1.5 match 3 stars 5.45 score 1 scripts