Showing 8 of total 8 results (show query)
rkbauer
oceanmap:A Plotting Toolbox for 2D Oceanographic Data
Plotting toolbox for 2D oceanographic data (satellite data, sea surface temperature, chlorophyll, ocean fronts & bathymetry). Recognized classes and formats include netcdf, Raster, '.nc' and '.gz' files.
Maintained by Robert K. Bauer. Last updated 1 years ago.
bathymetrychlaggplotmapping-toolsncdfoceanographic-dataremote-sensingsatellite-imspatial-datasst
11.0 match 4 stars 4.54 score 58 scripts 1 dependentspecanproject
PEcAn.utils:PEcAn Functions Used for Ecological Forecasts and Reanalysis
The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PEcAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.
Maintained by Rob Kooper. Last updated 2 days ago.
bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants
3.8 match 216 stars 10.92 score 218 scripts 35 dependentsbioboot
bio3d:Biological Structure Analysis
Utilities to process, organize and explore protein structure, sequence and dynamics data. Features include the ability to read and write structure, sequence and dynamic trajectory data, perform sequence and structure database searches, data summaries, atom selection, alignment, superposition, rigid core identification, clustering, torsion analysis, distance matrix analysis, structure and sequence conservation analysis, normal mode analysis, principal component analysis of heterogeneous structure data, and correlation network analysis from normal mode and molecular dynamics data. In addition, various utility functions are provided to enable the statistical and graphical power of the R environment to work with biological sequence and structural data. Please refer to the URLs below for more information.
Maintained by Barry Grant. Last updated 5 months ago.
4.5 match 5 stars 8.49 score 1.4k scripts 10 dependentsmarc-girondot
HelpersMG:Tools for Environmental Analyses, Ecotoxicology and Various R Functions
Contains miscellaneous functions useful for managing 'NetCDF' files (see <https://en.wikipedia.org/wiki/NetCDF>), get moon phase and time for sun rise and fall, tide level, analyse and reconstruct periodic time series of temperature with irregular sinusoidal pattern, show scales and wind rose in plot with change of color of text, Metropolis-Hastings algorithm for Bayesian MCMC analysis, plot graphs or boxplot with error bars, search files in disk by there names or their content, read the contents of all files from a folder at one time.
Maintained by Marc Girondot. Last updated 2 months ago.
3.6 match 4 stars 4.59 score 160 scripts 4 dependentspecanproject
PEcAn.PRELES:PEcAn Package for Integration of the PRELES Model
This module provides functions to run the PREdict Light use efficiency Evapotranspiration and Soil moisture (PRELES) model on the PEcAn project. The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool designed to simplify the management of model parameterization,execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.
Maintained by Tony Gardella. Last updated 2 days ago.
bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants
1.6 match 216 stars 7.56 score 4 scriptsyuanchao-xu
hyfo:Hydrology and Climate Forecasting
Focuses on data processing and visualization in hydrology and climate forecasting. Main function includes data extraction, data downscaling, data resampling, gap filler of precipitation, bias correction of forecasting data, flexible time series plot, and spatial map generation. It is a good pre- processing and post-processing tool for hydrological and hydraulic modellers.
Maintained by Yuanchao Xu. Last updated 7 days ago.
climateclimate-forecastingforecasting-modelshydrologymapsnetcdf4
1.8 match 15 stars 5.56 score 48 scriptsdavidwpierce
ncdf4:Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files
Provides a high-level R interface to data files written using Unidata's netCDF library (version 4 or earlier), which are binary data files that are portable across platforms and include metadata information in addition to the data sets. Using this package, netCDF files (either version 4 or "classic" version 3) can be opened and data sets read in easily. It is also easy to create new netCDF dimensions, variables, and files, in either version 3 or 4 format, and manipulate existing netCDF files. This package replaces the former ncdf package, which only worked with netcdf version 3 files. For various reasons the names of the functions have had to be changed from the names in the ncdf package. The old ncdf package is still available at the URL given below, if you need to have backward compatibility. It should be possible to have both the ncdf and ncdf4 packages installed simultaneously without a problem. However, the ncdf package does not provide an interface for netcdf version 4 files.
Maintained by David Pierce. Last updated 7 months ago.
1.0 match 3 stars 9.71 score 8.9k scripts 181 dependents