Showing 13 of total 13 results (show query)
deepayan
lattice:Trellis Graphics for R
A powerful and elegant high-level data visualization system inspired by Trellis graphics, with an emphasis on multivariate data. Lattice is sufficient for typical graphics needs, and is also flexible enough to handle most nonstandard requirements. See ?Lattice for an introduction.
Maintained by Deepayan Sarkar. Last updated 11 months ago.
68 stars 17.33 score 27k scripts 13k dependents
amices
mice:Multivariate Imputation by Chained Equations
Multiple imputation using Fully Conditional Specification (FCS) implemented by the MICE algorithm as described in Van Buuren and Groothuis-Oudshoorn (2011) <doi:10.18637/jss.v045.i03>. Each variable has its own imputation model. Built-in imputation models are provided for continuous data (predictive mean matching, normal), binary data (logistic regression), unordered categorical data (polytomous logistic regression) and ordered categorical data (proportional odds). MICE can also impute continuous two-level data (normal model, pan, second-level variables). Passive imputation can be used to maintain consistency between variables. Various diagnostic plots are available to inspect the quality of the imputations.
Maintained by Stef van Buuren. Last updated 1 days ago.
chained-equationsfcsimputationmicemissing-datamissing-valuesmultiple-imputationmultivariate-datacpp
462 stars 16.64 score 10k scripts 154 dependents
flr
FLCore:Core Package of FLR, Fisheries Modelling in R
Core classes and methods for FLR, a framework for fisheries modelling and management strategy simulation in R. Developed by a team of fisheries scientists in various countries. More information can be found at <http://flr-project.org/>.
Maintained by Iago Mosqueira. Last updated 10 days ago.
fisheriesflrfisheries-modelling
16 stars 8.78 score 956 scripts 23 dependents
oscarperpinan
rasterVis:Visualization Methods for Raster Data
Methods for enhanced visualization and interaction with raster data. It implements visualization methods for quantitative data and categorical data, both for univariate and multivariate rasters. It also provides methods to display spatiotemporal rasters, and vector fields. See the website for examples.
Maintained by Oscar Perpinan Lamigueiro. Last updated 1 years ago.
2 stars 8.06 score 4.2k scripts 13 dependents
bioc
flowViz:Visualization for flow cytometry
Provides visualization tools for flow cytometry data.
Maintained by Mike Jiang. Last updated 5 months ago.
immunooncologyinfrastructureflowcytometrycellbasedassaysvisualization
7.44 score 231 scripts 12 dependentsamices
ggmice:Visualizations for 'mice' with 'ggplot2'
Enhance a 'mice' imputation workflow with visualizations for incomplete and/or imputed data. The plotting functions produce 'ggplot' objects which may be easily manipulated or extended. Use 'ggmice' to inspect missing data, develop imputation models, evaluate algorithmic convergence, or compare observed versus imputed data.
Maintained by Hanne Oberman. Last updated 8 months ago.
32 stars 7.42 score 165 scripts
courtiol
IsoriX:Isoscape Computation and Inference of Spatial Origins using Mixed Models
Building isoscapes using mixed models and inferring the geographic origin of samples based on their isotopic ratios. This package is essentially a simplified interface to several other packages which implements a new statistical framework based on mixed models. It uses 'spaMM' for fitting and predicting isoscapes, and assigning an organism's origin depending on its isotopic ratio. 'IsoriX' also relies heavily on the package 'rasterVis' for plotting the maps produced with 'terra' using 'lattice'.
Maintained by Alexandre Courtiol. Last updated 7 months ago.
14 stars 5.59 score 56 scriptsbioc
crlmm:Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays
Faster implementation of CRLMM specific to SNP 5.0 and 6.0 arrays, as well as a copy number tool specific to 5.0, 6.0, and Illumina platforms.
Maintained by Benilton S Carvalho. Last updated 25 days ago.
microarraypreprocessingsnpcopynumbervariation
4.78 score 37 scripts 3 dependents
datacloning
dcmle:Hierarchical Models Made Easy with Data Cloning
S4 classes around infrastructure provided by the 'coda' and 'dclone' packages to make package development easy as a breeze with data cloning for hierarchical models.
Maintained by Peter Solymos. Last updated 6 months ago.
4.60 score 66 scripts 2 dependents
mjaeugster
archetypes:Archetypal Analysis
The main function archetypes implements a framework for archetypal analysis supporting arbitrary problem solving mechanisms for the different conceptual parts of the algorithm.
Maintained by Manuel J. A. Eugster. Last updated 6 years ago.
3 stars 4.49 score 57 scripts 3 dependents
solarization
solaR2:Radiation and Photovoltaic Systems
Provides tools for calculating solar geometry, solar radiation on horizontal and inclined planes, and simulating the performance of various photovoltaic (PV) systems. Supports daily and intradaily irradiation data, enabling detailed analysis of grid-connected and water-pumping PV systems, including shading effects and solar angle calculations.
Maintained by Francisco Delgado-López. Last updated 1 months ago.
1 stars 4.08 score 5 scriptsoscarperpinan
solaR:Radiation and Photovoltaic Systems
Calculation methods of solar radiation and performance of photovoltaic systems from daily and intradaily irradiation data sources.
Maintained by Oscar Perpiñán Lamigueiro. Last updated 3 years ago.
1 stars 2.74 score 55 scripts
cran
QCAtools:Helper Functions for QCA in R
Helper functions for Qualitative Comparative Analysis: evaluate and plot Boolean formulae on fuzzy set score data, apply Boolean operations, compute consistency and coverage measures.
Maintained by Jirka Lewandowski. Last updated 8 years ago.
1.70 score