Showing 7 of total 7 results (show query)
tidyverse
ggplot2:Create Elegant Data Visualisations Using the Grammar of Graphics
A system for 'declaratively' creating graphics, based on "The Grammar of Graphics". You provide the data, tell 'ggplot2' how to map variables to aesthetics, what graphical primitives to use, and it takes care of the details.
Maintained by Thomas Lin Pedersen. Last updated 8 days ago.
data-visualisationvisualisation
6.6k stars 25.10 score 645k scripts 7.6k dependents
bioc
ggtree:an R package for visualization of tree and annotation data
'ggtree' extends the 'ggplot2' plotting system which implemented the grammar of graphics. 'ggtree' is designed for visualization and annotation of phylogenetic trees and other tree-like structures with their annotation data.
Maintained by Guangchuang Yu. Last updated 5 months ago.
alignmentannotationclusteringdataimportmultiplesequencealignmentphylogeneticsreproducibleresearchsoftwarevisualizationannotationsggplot2phylogenetic-trees
871 stars 16.83 score 5.1k scripts 109 dependentsbioc
ggbio:Visualization tools for genomic data
The ggbio package extends and specializes the grammar of graphics for biological data. The graphics are designed to answer common scientific questions, in particular those often asked of high throughput genomics data. All core Bioconductor data structures are supported, where appropriate. The package supports detailed views of particular genomic regions, as well as genome-wide overviews. Supported overviews include ideograms and grand linear views. High-level plots include sequence fragment length, edge-linked interval to data view, mismatch pileup, and several splicing summaries.
Maintained by Michael Lawrence. Last updated 5 months ago.
111 stars 12.23 score 734 scripts 16 dependents
animint
animint2:Animated Interactive Grammar of Graphics
Functions are provided for defining animated, interactive data visualizations in R code, and rendering on a web page. The 2018 Journal of Computational and Graphical Statistics paper, <doi:10.1080/10618600.2018.1513367> describes the concepts implemented.
Maintained by Toby Hocking. Last updated 1 months ago.
64 stars 8.84 score 173 scripts
hypertidy
vaster:Tools for Raster Grid Logic
Provides raster grid logic, the grid operations that don't require access to materialized data, i.e. most of them. Grids are arrays with dimension and extent, and many operations are functions of just the dimension 'nrows', 'ncols' or a combination of the dimension and the extent 'xmin', 'xmax', 'ymin', 'ymax'. Here we provide direct access to this logic without need for connection to any materialized data or formats. Grid logic includes functions that relate the cell index to row and column, or row and column to cell index, row, column or cell index to position. Cell index, and row,column posiiton exist independently of any other use of a raster grid.
Maintained by Michael Sumner. Last updated 11 months ago.
7 stars 3.62 score 9 scripts 2 dependents
barryzee
textBoxPlacement:Compute a Non-Overlapping Layout of Text Boxes to Label Multiple Overlain Plots
Compute a non-overlapping layout of text boxes to label multiple overlain curves. For each curve, iteratively search for an adjacent x,y position for the text box that does not overlap with the other curves. If this process fails, then offsets are computed to add to the y values for each curve, that results in sufficient space to add all of the text labels.
Maintained by Barry Zeeberg. Last updated 2 years ago.
2.48 score 1 dependentshypertidy
granulated:Define Rectangular Regions with Granularity
A granule is a rectangular extent with an implied discretization. The default granularity is 1x1, the range is a whole divisor of itself. This is the general concept of a raster, a rectangular window with discretization. The common extent or bounding box concept can be thought of as the degenerate case (1x1).
Maintained by Michael D. Sumner. Last updated 3 years ago.
3 stars 2.18 score 1 scripts