Showing 13 of total 13 results (show query)
tidyverse
ggplot2:Create Elegant Data Visualisations Using the Grammar of Graphics
A system for 'declaratively' creating graphics, based on "The Grammar of Graphics". You provide the data, tell 'ggplot2' how to map variables to aesthetics, what graphical primitives to use, and it takes care of the details.
Maintained by Thomas Lin Pedersen. Last updated 3 days ago.
data-visualisationvisualisation
6.6k stars 25.10 score 645k scripts 7.6k dependents
bioc
ggtree:an R package for visualization of tree and annotation data
'ggtree' extends the 'ggplot2' plotting system which implemented the grammar of graphics. 'ggtree' is designed for visualization and annotation of phylogenetic trees and other tree-like structures with their annotation data.
Maintained by Guangchuang Yu. Last updated 5 months ago.
alignmentannotationclusteringdataimportmultiplesequencealignmentphylogeneticsreproducibleresearchsoftwarevisualizationannotationsggplot2phylogenetic-trees
864 stars 16.86 score 5.1k scripts 109 dependents
briatte
ggnetwork:Geometries to Plot Networks with 'ggplot2'
Geometries to plot network objects with 'ggplot2'.
Maintained by François Briatte. Last updated 9 months ago.
149 stars 11.74 score 766 scripts 15 dependentsbioc
SpatialFeatureExperiment:Integrating SpatialExperiment with Simple Features in sf
A new S4 class integrating Simple Features with the R package sf to bring geospatial data analysis methods based on vector data to spatial transcriptomics. Also implements management of spatial neighborhood graphs and geometric operations. This pakage builds upon SpatialExperiment and SingleCellExperiment, hence methods for these parent classes can still be used.
Maintained by Lambda Moses. Last updated 2 months ago.
datarepresentationtranscriptomicsspatial
49 stars 9.40 score 322 scripts 1 dependents
pvanlaake
CFtime:Using CF-Compliant Calendars with Climate Projection Data
Support for all calendars as specified in the Climate and Forecast (CF) Metadata Conventions for climate and forecasting data. The CF Metadata Conventions is widely used for distributing files with climate observations or projections, including the Coupled Model Intercomparison Project (CMIP) data used by climate change scientists and the Intergovernmental Panel on Climate Change (IPCC). This package specifically allows the user to work with any of the CF-compliant calendars (many of which are not compliant with POSIXt). The CF time coordinate is formally defined in the CF Metadata Conventions document available at <https://cfconventions.org/Data/cf-conventions/cf-conventions-1.12/cf-conventions.html#time-coordinate>.
Maintained by Patrick Van Laake. Last updated 5 hours ago.
5 stars 9.24 score 48 scripts 15 dependents
animint
animint2:Animated Interactive Grammar of Graphics
Functions are provided for defining animated, interactive data visualizations in R code, and rendering on a web page. The 2018 Journal of Computational and Graphical Statistics paper, <doi:10.1080/10618600.2018.1513367> describes the concepts implemented.
Maintained by Toby Hocking. Last updated 1 months ago.
64 stars 8.84 score 173 scripts
yunuuuu
ggalign:A 'ggplot2' Extension for Consistent Axis Alignment
A 'ggplot2' extension offers various tools the creation of complex, multi-plot visualizations. Built on the familiar grammar of graphics, it provides intuitive tools to align and organize plots, making it ideal for complex visualizations. It excels in multi-omics research—such as genomics and microbiomes—by simplifying the visualization of intricate relationships between datasets, for example, linking genes to pathways. Whether you need to stack plots, arrange them around a central figure, or create a circular layout, 'ggalign' delivers flexibility and accuracy with minimal effort.
Maintained by Yun Peng. Last updated 13 days ago.
complex-heatmapsdendrogramdendrogram-heatmapggplotggplot-extensionggplot2heatmapheatmap-visualizationheatmapsmarginal-plotsoncoplotoncoprinttanglegramupsetupsetplot
267 stars 7.08 score 27 scripts
r-forge
variables:Variable Descriptions
Abstract descriptions of (yet) unobserved variables.
Maintained by Torsten Hothorn. Last updated 8 days ago.
5.91 score 11 scripts 12 dependents
cmmr
fillpattern:Patterned Fills for 'ggplot2' and 'grid' Graphics
Adds distinctive yet unobtrusive geometric patterns where solid color fills are normally used. Patterned figures look just as professional when viewed by colorblind readers or when printed in black and white. The dozen included patterns can be customized in terms of scale, rotation, color, fill, line type, and line width. Compatible with the 'ggplot2' package as well as 'grid' graphics.
Maintained by Daniel P. Smith. Last updated 9 months ago.
8 stars 5.28 score 13 scripts 7 dependents
euctrl-pru
nvctr:The n-vector Approach to Geographical Position Calculations using an Ellipsoidal Model of Earth
The n-vector framework uses the normal vector to the Earth ellipsoid (called n-vector) as a non-singular position representation that turns out to be very convenient for practical position calculations. The n-vector is simple to use and gives exact answers for all global positions, and all distances, for both ellipsoidal and spherical Earth models. This package is a translation of the 'Matlab' library from FFI, the Norwegian Defence Research Establishment, as described in Gade (2010) <doi:10.1017/S0373463309990415>.
Maintained by Enrico Spinielli. Last updated 12 months ago.
geographical-positionsn-vector
10 stars 5.19 score 31 scripts
johannes-titz
leabRa:The Artificial Neural Networks Algorithm Leabra
The algorithm Leabra (local error driven and associative biologically realistic algorithm) allows for the construction of artificial neural networks that are biologically realistic and balance supervised and unsupervised learning within a single framework. This package is based on the 'MATLAB' version by Sergio Verduzco-Flores, which in turn was based on the description of the algorithm by Randall O'Reilly (1996) <ftp://grey.colorado.edu/pub/oreilly/thesis/oreilly_thesis.all.pdf>. For more general (not 'R' specific) information on the algorithm Leabra see <https://grey.colorado.edu/emergent/index.php/Leabra>.
Maintained by Johannes Titz. Last updated 8 years ago.
2 stars 4.00 score 5 scripts
cran
scplot:Plot Function for Single-Case Data Frames
Add-on for the 'scan' package that creates plots from single-case data frames ('scdf'). It includes functions for styling single-case plots, adding phase-based lines to indicate various statistical parameters, and predefined themes for presentations and publications. More information and in depth examples can be found in the online book "Analyzing Single-Case Data with R and 'scan" Jürgen Wilbert (2025) <https://jazznbass.github.io/scan-Book/>.
Maintained by Juergen Wilbert. Last updated 27 days ago.
2.18 score
