Showing 11 of total 11 results (show query)
irkernel
IRkernel:Native R Kernel for the 'Jupyter Notebook'
The R kernel for the 'Jupyter' environment executes R code which the front-end ('Jupyter Notebook' or other front-ends) submits to the kernel via the network.
Maintained by Philipp Angerer. Last updated 11 months ago.
jupyterjupyter-kernelsjupyter-notebookzmq
1.7k stars 11.78 score 139 scripts 23 dependents
insightsengineering
chevron:Standard TLGs for Clinical Trials Reporting
Provide standard tables, listings, and graphs (TLGs) libraries used in clinical trials. This package implements a structure to reformat the data with 'dunlin', create reporting tables using 'rtables' and 'tern' with standardized input arguments to enable quick generation of standard outputs. In addition, it also provides comprehensive data checks and script generation functionality.
Maintained by Joe Zhu. Last updated 1 months ago.
clinical-trialsgraphslistingsnestreportingtables
14 stars 8.30 score 12 scripts
r-forge
distrMod:Object Oriented Implementation of Probability Models
Implements S4 classes for probability models based on packages 'distr' and 'distrEx'.
Maintained by Peter Ruckdeschel. Last updated 2 months ago.
6.60 score 139 scripts 6 dependents
cox-labs
PerseusR:Perseus R Interop
Enables the interoperability between the Perseus platform for omics data analysis (Tyanova et al. 2016) <doi:10.1038/nmeth.3901> and R. It provides the foundation for developing and running Perseus plugins implemented in R by providing all required input and output handling, including data and parameter parsing as described in Rudolph and Cox 2018 <doi:10.1101/447268>.
Maintained by Jan Rudolph. Last updated 3 years ago.
bioinformaticsinteropmaxquantperseusproteomics
13 stars 5.88 score 58 scripts
seankross
swirl:Learn R, in R
Use the R console as an interactive learning environment. Users receive immediate feedback as they are guided through self-paced lessons in data science and R programming.
Maintained by Sean Kross. Last updated 5 years ago.
5.57 score 1.8k scripts 1 dependents
tpetzoldt
simecol:Simulation of Ecological (and Other) Dynamic Systems
An object oriented framework to simulate ecological (and other) dynamic systems. It can be used for differential equations, individual-based (or agent-based) and other models as well. It supports structuring of simulation scenarios (to avoid copy and paste) and aims to improve readability and re-usability of code.
Maintained by Thomas Petzoldt. Last updated 8 months ago.
4.76 score 190 scripts
melff
RKernel:Yet another R kernel for Jupyter
Provides a kernel for Jupyter.
Maintained by Martin Elff. Last updated 10 days ago.
jupyterjupyter-kerneljupyter-kernelsjupyter-notebook
39 stars 4.63 score
asenetcky
strata:Simple Framework for Simple Automation
Build a project framework for users with access to only the most basic of automation tools.
Maintained by Alexander Senetcky. Last updated 25 days ago.
2 stars 3.95 score 6 scripts
tconwell
html5:Creates Valid HTML5 Strings
Generates valid HTML tag strings for HTML5 elements documented by Mozilla. Attributes are passed as named lists, with names being the attribute name and values being the attribute value. Attribute values are automatically double-quoted. To declare a DOCTYPE, wrap html() with function doctype(). Mozilla's documentation for HTML5 is available here: <https://developer.mozilla.org/en-US/docs/Web/HTML/Element>. Elements marked as obsolete are not included.
Maintained by Timothy Conwell. Last updated 2 years ago.
1 stars 3.65 score 1 scripts 3 dependents
cran
EDISON:Network Reconstruction and Changepoint Detection
Package EDISON (Estimation of Directed Interactions from Sequences Of Non-homogeneous gene expression) runs an MCMC simulation to reconstruct networks from time series data, using a non-homogeneous, time-varying dynamic Bayesian network. Networks segments and changepoints are inferred concurrently, and information sharing priors provide a reduction of the inference uncertainty.
Maintained by Frank Dondelinger. Last updated 9 years ago.
2 stars 2.62 score 1 dependents
thezetner
Plasmidprofiler:Visualization of Plasmid Profile Results
Contains functions developed to combine the results of querying a plasmid database using short-read sequence typing with the results of a blast analysis against the query results.
Maintained by Adrian Zetner. Last updated 8 years ago.
1.43 score 27 scripts