Showing 10 of total 10 results (show query)
ropensci
DataPackageR:Construct Reproducible Analytic Data Sets as R Packages
A framework to help construct R data packages in a reproducible manner. Potentially time consuming processing of raw data sets into analysis ready data sets is done in a reproducible manner and decoupled from the usual 'R CMD build' process so that data sets can be processed into R objects in the data package and the data package can then be shared, built, and installed by others without the need to repeat computationally costly data processing. The package maintains data provenance by turning the data processing scripts into package vignettes, as well as enforcing documentation and version checking of included data objects. Data packages can be version controlled on 'GitHub', and used to share data for manuscripts, collaboration and reproducible research.
Maintained by Dave Slager. Last updated 6 months ago.
78.0 match 156 stars 9.38 score 72 scripts
djvanderlaan
datapackage:Creating and Reading Data Packages
Open, read data from and modify Data Packages. Data Packages are an open standard for bundling and describing data sets (<https://datapackage.org>). When data is read from a Data Package care is taken to convert the data as much a possible to R appropriate data types. The package can be extended with plugins for additional data types.
Maintained by Jan van der Laan. Last updated 5 days ago.
66.7 match 2 stars 5.62 scoreropensci
datapack:A Flexible Container to Transport and Manipulate Data and Associated Resources
Provides a flexible container to transport and manipulate complex sets of data. These data may consist of multiple data files and associated meta data and ancillary files. Individual data objects have associated system level meta data, and data files are linked together using the OAI-ORE standard resource map which describes the relationships between the files. The OAI- ORE standard is described at <https://www.openarchives.org/ore/>. Data packages can be serialized and transported as structured files that have been created following the BagIt specification. The BagIt specification is described at <https://tools.ietf.org/html/draft-kunze-bagit-08>.
Maintained by Matthew B. Jones. Last updated 3 years ago.
23.0 match 44 stars 8.56 score 195 scripts 4 dependents
dataoneorg
dataone:R Interface to the DataONE REST API
Provides read and write access to data and metadata from the DataONE network <https://www.dataone.org> of data repositories. Each DataONE repository implements a consistent repository application programming interface. Users call methods in R to access these remote repository functions, such as methods to query the metadata catalog, get access to metadata for particular data packages, and read the data objects from the data repository. Users can also insert and update data objects on repositories that support these methods.
Maintained by Matthew B. Jones. Last updated 3 years ago.
12.3 match 36 stars 9.93 score 472 scripts 3 dependents
erictleung
pixarfilms:Pixar Films and Achievements
Data about Disney Pixar films provided by Wikipedia. This package contains data about the films, the people involved, and their awards.
Maintained by Eric Leung. Last updated 1 days ago.
datadata-sciencedatapackagedisneyimdbimdb-datasetpixarpixar-filmsweb-scrapingwikipedia
10.0 match 20 stars 7.41 score 23 scripts 1 dependents
bioc
ReportingTools:Tools for making reports in various formats
The ReportingTools software package enables users to easily display reports of analysis results generated from sources such as microarray and sequencing data. The package allows users to create HTML pages that may be viewed on a web browser such as Safari, or in other formats readable by programs such as Excel. Users can generate tables with sortable and filterable columns, make and display plots, and link table entries to other data sources such as NCBI or larger plots within the HTML page. Using the package, users can also produce a table of contents page to link various reports together for a particular project that can be viewed in a web browser. For more examples, please visit our site: http:// research-pub.gene.com/ReportingTools.
Maintained by Jason A. Hackney. Last updated 5 months ago.
immunooncologysoftwarevisualizationmicroarrayrnaseqgodatarepresentationgenesetenrichment
6.6 match 6.23 score 93 scripts 1 dependentsropensci
deposits:A universal client for depositing and accessing research data anywhere
A universal client for depositing and accessing research data anywhere. Currently supported services are zenodo and figshare.
Maintained by Mark Padgham. Last updated 6 months ago.
3.7 match 39 stars 6.21 score 8 scripts 2 dependentsropensci
frictionless:Read and Write Frictionless Data Packages
Read and write Frictionless Data Packages. A 'Data Package' (<https://specs.frictionlessdata.io/data-package/>) is a simple container format and standard to describe and package a collection of (tabular) data. It is typically used to publish FAIR (<https://www.go-fair.org/fair-principles/>) and open datasets.
Maintained by Peter Desmet. Last updated 6 months ago.
1.7 match 30 stars 9.79 score 55 scripts 6 dependents
christophergandrud
dpmr:Data Package Manager for R
Create, install, and summarise data packages that follow the Open Knowledge Foundation's Data Package Protocol.
Maintained by Christopher Gandrud. Last updated 8 years ago.
2.0 match 56 stars 4.45 score 5 scripts
ecohealthalliance
ohcleandat:One Health Data Cleaning and Quality Checking Package
This package provides useful functions to orchestrate analytics and data cleaning pipelines for One Health projects.
Maintained by Collin Schwantes. Last updated 4 days ago.
1.8 match 1 stars 4.88 score 5 scripts