Showing 69 of total 69 results (show query)
rinterface
shinydashboardPlus:Add More 'AdminLTE2' Components to 'shinydashboard'
Extend 'shinydashboard' with 'AdminLTE2' components. 'AdminLTE2' is a free 'Bootstrap 3' dashboard template available at <https://adminlte.io>. Customize boxes, add timelines and a lot more.
Maintained by David Granjon. Last updated 8 months ago.
dashboardhacktoberfest2022shinyshiny-appsshinydashboard
461 stars 13.82 score 1.1k scripts 28 dependentsrinterface
bs4Dash:A 'Bootstrap 4' Version of 'shinydashboard'
Make 'Bootstrap 4' Shiny dashboards. Use the full power of 'AdminLTE3', a dashboard template built on top of 'Bootstrap 4' <https://github.com/ColorlibHQ/AdminLTE>.
Maintained by David Granjon. Last updated 7 months ago.
bootstrap4dashboard-templateshacktoberfest2022shinyshiny-appsshinydashboard
445 stars 12.85 score 1.2k scripts 16 dependents
bioc
GeneTonic:Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis
This package provides functionality to combine the existing pieces of the transcriptome data and results, making it easier to generate insightful observations and hypothesis. Its usage is made easy with a Shiny application, combining the benefits of interactivity and reproducibility e.g. by capturing the features and gene sets of interest highlighted during the live session, and creating an HTML report as an artifact where text, code, and output coexist. Using the GeneTonicList as a standardized container for all the required components, it is possible to simplify the generation of multiple visualizations and summaries.
Maintained by Federico Marini. Last updated 3 months ago.
guigeneexpressionsoftwaretranscriptiontranscriptomicsvisualizationdifferentialexpressionpathwaysreportwritinggenesetenrichmentannotationgoshinyappsbioconductorbioconductor-packagedata-explorationdata-visualizationfunctional-enrichment-analysisgene-expressionpathway-analysisreproducible-researchrna-seq-analysisrna-seq-datashinytranscriptomeuser-friendly
77 stars 8.28 score 37 scripts 1 dependents
pharmaverse
logrx:A Logging Utility Focus on Clinical Trial Programming Workflows
A utility to facilitate the logging and review of R programs in clinical trial programming workflows.
Maintained by Nathan Kosiba. Last updated 28 days ago.
41 stars 7.60 score 15 scriptsbioc
systemPipeShiny:systemPipeShiny: An Interactive Framework for Workflow Management and Visualization
systemPipeShiny (SPS) extends the widely used systemPipeR (SPR) workflow environment with a versatile graphical user interface provided by a Shiny App. This allows non-R users, such as experimentalists, to run many systemPipeR’s workflow designs, control, and visualization functionalities interactively without requiring knowledge of R. Most importantly, SPS has been designed as a general purpose framework for interacting with other R packages in an intuitive manner. Like most Shiny Apps, SPS can be used on both local computers as well as centralized server-based deployments that can be accessed remotely as a public web service for using SPR’s functionalities with community and/or private data. The framework can integrate many core packages from the R/Bioconductor ecosystem. Examples of SPS’ current functionalities include: (a) interactive creation of experimental designs and metadata using an easy to use tabular editor or file uploader; (b) visualization of workflow topologies combined with auto-generation of R Markdown preview for interactively designed workflows; (d) access to a wide range of data processing routines; (e) and an extendable set of visualization functionalities. Complex visual results can be managed on a 'Canvas Workbench’ allowing users to organize and to compare plots in an efficient manner combined with a session snapshot feature to continue work at a later time. The present suite of pre-configured visualization examples. The modular design of SPR makes it easy to design custom functions without any knowledge of Shiny, as well as extending the environment in the future with contributions from the community.
Maintained by Le Zhang. Last updated 5 months ago.
shinyappsinfrastructuredataimportsequencingqualitycontrolreportwritingexperimentaldesignclusteringbioconductorbioconductor-packagedata-visualizationshinysystempiper
34 stars 7.04 score 36 scriptsbioc
pRolocGUI:Interactive visualisation of spatial proteomics data
The package pRolocGUI comprises functions to interactively visualise spatial proteomics data on the basis of pRoloc, pRolocdata and shiny.
Maintained by Lisa Breckels. Last updated 5 months ago.
8 stars 6.90 score 3 scripts
richardhooijmaijers
shinyMixR:Interactive 'shiny' Dashboard for 'nlmixr2'
An R shiny user interface for the 'nlmixr2' (Fidler et al (2019) <doi:10.1002/psp4.12445>) package, designed to simplify the modeling process for users. Additionally, this package includes supplementary functions to further enhances the usage of 'nlmixr2'.
Maintained by Richard Hooijmaijers. Last updated 5 months ago.
11 stars 6.74 score 28 scripts
thewileylab
ReviewR:A Light-Weight, Portable Tool for Reviewing Individual Patient Records
A portable Shiny tool to explore patient-level electronic health record data and perform chart review in a single integrated framework. This tool supports browsing clinical data in many different formats including multiple versions of the 'OMOP' common data model as well as the 'MIMIC-III' data model. In addition, chart review information is captured and stored securely via the Shiny interface in a 'REDCap' (Research Electronic Data Capture) project using the 'REDCap' API. See the 'ReviewR' website for additional information, documentation, and examples.
Maintained by David Mayer. Last updated 2 years ago.
24 stars 6.33 score 6 scripts
aggregate-genius
periscope2:Enterprise Streamlined 'shiny' Application Framework Using 'bs4Dash'
A framework for building enterprise, scalable and UI-standardized 'shiny' applications. It brings enhanced features such as 'bootstrap' v4 <https://getbootstrap.com/docs/4.0/getting-started/introduction/>, additional and enhanced 'shiny' modules, customizable UI features, as well as an enhanced application file organization paradigm. This update allows developers to harness the ability to build powerful applications and enriches the 'shiny' developers' experience when building and maintaining applications.
Maintained by Mohammed Ali. Last updated 2 months ago.
9 stars 6.18 score 34 scripts
ashbaldry
designer:'Shiny' UI Prototype Builder
A 'shiny' application that enables the user to create a prototype UI, being able to drag and drop UI components before being able to save or download the equivalent R code.
Maintained by Ashley Baldry. Last updated 2 years ago.
149 stars 6.17 score 3 scriptsbioc
ChromSCape:Analysis of single-cell epigenomics datasets with a Shiny App
ChromSCape - Chromatin landscape profiling for Single Cells - is a ready-to-launch user-friendly Shiny Application for the analysis of single-cell epigenomics datasets (scChIP-seq, scATAC-seq, scCUT&Tag, ...) from aligned data to differential analysis & gene set enrichment analysis. It is highly interactive, enables users to save their analysis and covers a wide range of analytical steps: QC, preprocessing, filtering, batch correction, dimensionality reduction, vizualisation, clustering, differential analysis and gene set analysis.
Maintained by Pacome Prompsy. Last updated 5 months ago.
shinyappssoftwaresinglecellchipseqatacseqmethylseqclassificationclusteringepigeneticsprincipalcomponentannotationbatcheffectmultiplecomparisonnormalizationpathwayspreprocessingqualitycontrolreportwritingvisualizationgenesetenrichmentdifferentialpeakcallingepigenomicsshinysingle-cellcpp
14 stars 5.83 score 16 scriptsbioc
GeDi:Defining and visualizing the distances between different genesets
The package provides different distances measurements to calculate the difference between genesets. Based on these scores the genesets are clustered and visualized as graph. This is all presented in an interactive Shiny application for easy usage.
Maintained by Annekathrin Nedwed. Last updated 5 months ago.
guigenesetenrichmentsoftwaretranscriptionrnaseqvisualizationclusteringpathwaysreportwritinggokeggreactomeshinyapps
1 stars 5.36 score 22 scripts
molinlab
Holomics:An User-Friendly R 'shiny' Application for Multi-Omics Data Integration and Analysis
A 'shiny' application, which allows you to perform single- and multi-omics analyses using your own omics datasets. After the upload of the omics datasets and a metadata file, single-omics is performed for feature selection and dataset reduction. These datasets are used for pairwise- and multi-omics analyses, where automatic tuning is done to identify correlations between the datasets - the end goal of the recommended 'Holomics' workflow. Methods used in the package were implemented in the package 'mixomics' by Florian Rohart,Benoît Gautier,Amrit Singh,Kim-Anh Lê Cao (2017) <doi:10.1371/journal.pcbi.1005752> and are described there in further detail.
Maintained by Katharina Munk. Last updated 10 months ago.
7 stars 5.32 score 7 scriptsbioc
omXplore:Vizualization tools for 'omics' datasets with R
This package contains a collection of functions (written as shiny modules) for the visualisation and the statistical analysis of omics data. These plots can be displayed individually or embedded in a global Shiny module. Additionaly, it is possible to integrate third party modules to the main interface of the package omXplore.
Maintained by Samuel Wieczorek. Last updated 5 days ago.
softwareshinyappsmassspectrometrydatarepresentationguiqualitycontrolprostar2
5.32 score 23 scripts
pydemull
activAnalyzer:A 'Shiny' App to Analyze Accelerometer-Measured Daily Physical Behavior Data
A tool to analyse 'ActiGraph' accelerometer data and to implement the use of the PROactive Physical Activity in COPD (chronic obstructive pulmonary disease) instruments. Once analysis is completed, the app allows to export results to .csv files and to generate a report of the measurement. All the configured inputs relevant for interpreting the results are recorded in the report. In addition to the existing 'R' packages that are fully integrated with the app, the app uses some functions from the 'actigraph.sleepr' package developed by Petkova (2021) <https://github.com/dipetkov/actigraph.sleepr/>.
Maintained by Pierre-Yves de Müllenheim. Last updated 13 days ago.
accelerometeractigraphappmonitorshiny
5 stars 5.24 score 8 scripts
massimoaria
tall:Text Analysis for All
An R 'shiny' app designed for diverse text analysis tasks, offering a wide range of methodologies tailored to Natural Language Processing (NLP) needs. It is a versatile, general-purpose tool for analyzing textual data. 'tall' features a comprehensive workflow, including data cleaning, preprocessing, statistical analysis, and visualization, all integrated for effective text analysis.
Maintained by Massimo Aria. Last updated 1 days ago.
r-shinytext-analysis-and-sentiment-analysistext-classificationtext-miningtextual-analysiscpp
16 stars 5.18 score
promidat
loadeR:Load Data for Analysis System
Provides a framework to load text and excel files through a 'shiny' graphical interface. It allows renaming, transforming, ordering and removing variables. It includes basic exploratory methods such as the mean, median, mode, normality test, histogram and correlation.
Maintained by Oldemar Rodriguez. Last updated 2 years ago.
5.09 score 275 scripts 3 dependentsbioc
chevreulShiny:Tools for managing SingleCellExperiment objects as projects
Tools for managing SingleCellExperiment objects as projects. Includes functions for analysis and visualization of single-cell data. Also included is a shiny app for visualization of pre-processed scRNA data. Supported by NIH grants R01CA137124 and R01EY026661 to David Cobrinik.
Maintained by Kevin Stachelek. Last updated 1 months ago.
coveragernaseqsequencingvisualizationgeneexpressiontranscriptionsinglecelltranscriptomicsnormalizationpreprocessingqualitycontroldimensionreductiondataimport
5.08 score
celehs
phecodemap:Visualization for Phecode Mapping with ICD-9 and ICD-10-cm Codes
Phecodemap builds a shiny app to visualize the hierarchy of Phecode Mapping with ICD. The same Phecode hierarchy is displayed in two ways: as a sunburst plot and as a tree.
Maintained by Parse Health. Last updated 1 years ago.
3 stars 5.07 score 13 scripts
martinschobben
oceanexplorer:Explore Our Planet's Oceans with NOAA
Provides tools for easy exploration of the world ocean atlas of the US agency National Oceanic and Atmospheric Administration (NOAA). It includes functions to extract NetCDF data from the repository and code to visualize several physical and chemical parameters of the ocean. A Shiny app further allows interactive exploration of the data. The methods for data collecting and quality checks are described in several papers, which can be found here: <https://www.ncei.noaa.gov/products/world-ocean-atlas>.
Maintained by Martin Schobben. Last updated 1 years ago.
earthearth-observationearth-sciencenoaanoaa-dataoceanocean-sciencesoceanographyopen-datashinyspatialspatial-analysisspatial-data
9 stars 5.01 score 23 scripts
seewe
dataCompare:A 'shiny' App to Compare Two Data Frames
A tool developed with the 'Golem' framework which provides an easier way to check cells differences between two data frames. The user provides two data frames for comparison, selects IDs variables identifying each row of input data, then clicks a button to perform the comparison. Several 'R' package functions are used to describe the data and perform the comparison in the server of the application. The main ones are comparedf() from 'arsenal' and skim() from 'skimr'. For more details see the description of comparedf() from the 'arsenal' package and that of skim() from the 'skimr' package.
Maintained by Sergio Ewane Ebouele. Last updated 4 months ago.
2 stars 4.78 score 4 scriptsbioc
scanMiRApp:scanMiR shiny application
A shiny interface to the scanMiR package. The application enables the scanning of transcripts and custom sequences for miRNA binding sites, the visualization of KdModels and binding results, as well as browsing predicted repression data. In addition contains the IndexedFst class for fast indexed reading of large GenomicRanges or data.frames, and some utilities for facilitating scans and identifying enriched miRNA-target pairs.
Maintained by Pierre-Luc Germain. Last updated 5 months ago.
mirnasequencematchingguishinyapps
4.76 score 19 scriptsbioc
GNOSIS:Genomics explorer using statistical and survival analysis in R
GNOSIS incorporates a range of R packages enabling users to efficiently explore and visualise clinical and genomic data obtained from cBioPortal. GNOSIS uses an intuitive GUI and multiple tab panels supporting a range of functionalities. These include data upload and initial exploration, data recoding and subsetting, multiple visualisations, survival analysis, statistical analysis and mutation analysis, in addition to facilitating reproducible research.
Maintained by Lydia King. Last updated 5 months ago.
5 stars 4.70 score 2 scripts
p-chevallier
htsr:Hydro-Meteorology Time-Series
Functions for the management and treatment of hydrology and meteorology time-series stored in a 'Sqlite' data base.
Maintained by Pierre Chevallier. Last updated 7 months ago.
4.60 score 2 scripts
giocomai
castarter:Content Analysis Starter Toolkit
Consistent approaches for basic web scraping, text mining and word frequency analysis of textual datasets.
Maintained by Giorgio Comai. Last updated 4 days ago.
3 stars 4.59 score 2 scriptsbioc
crisprShiny:Exploring curated CRISPR gRNAs via Shiny
Provides means to interactively visualize guide RNAs (gRNAs) in GuideSet objects via Shiny application. This GUI can be self-contained or as a module within a larger Shiny app. The content of the app reflects the annotations present in the passed GuideSet object, and includes intuitive tools to examine, filter, and export gRNAs, thereby making gRNA design more user-friendly.
Maintained by Jean-Philippe Fortin. Last updated 5 months ago.
crisprfunctionalgenomicsgenetargetguicrispr-analysiscrispr-designshiny
2 stars 4.48 score 8 scripts
poissonconsulting
shinyypr:Run ypr Shiny App
A user interface to the 'ypr' R package. 'Ypr' implements equilibrium-based yield per recruit methods for estimating the optimal yield for a fish population.
Maintained by Ayla Pearson. Last updated 3 months ago.
3 stars 4.26 score 3 scripts
miracum
DQAgui:Graphical User Interface for Data Quality Assessment
A graphical user interface (GUI) to the functions implemented in the R package 'DQAstats'. Publication: Mang et al. (2021) <doi:10.1186/s12911-022-01961-z>.
Maintained by Lorenz A. Kapsner. Last updated 2 months ago.
2 stars 4.15 score 10 scripts
jkkishore85
PERK:Predicting Environmental Concentration and Risk
A Shiny Web Application to predict and visualize concentrations of pharmaceuticals in the aqueous environment. Jagadeesan K., Barden R. and Kasprzyk-Hordern B. (2022) <https://www.ssrn.com/abstract=4306129>.
Maintained by Kishore Kumar Jagadeesan. Last updated 2 years ago.
environmental-monitoringpharmaceuticalsprediction-modelshinyshiny-appsshiny-r
2 stars 4.00 score 1 scripts
amderoos
deBif:Bifurcation Analysis of Ordinary Differential Equation Systems
Shiny application that performs bifurcation and phaseplane analysis of systems of ordinary differential equations. The package allows for computation of equilibrium curves as a function of a single free parameter, detection of transcritical, saddle-node and hopf bifurcation points along these curves, and computation of curves representing these transcritical, saddle-node and hopf bifurcation points as a function of two free parameters. The shiny-based GUI allows visualization of the results in both 2D- and 3D-plots. The implemented methods for solution localisation and curve continuation are based on the book "Elements of applied bifurcation theory" (Kuznetsov, Y. A., 1995; ISBN: 0-387-94418-4).
Maintained by Andre M. de Roos. Last updated 1 months ago.
4.00 score 3 scripts
cpossinger
fdapaceShiny:A Shiny App for the 'fdapace' Package
Shiny app for the 'fdapace' package.
Maintained by Camden Possinger. Last updated 3 years ago.
2 stars 4.00 score 4 scriptscelehs
kesernetwork:Visualization of the KESER Network
A shiny app to visualize the knowledge networks for the code concepts. Using co-occurrence matrices of EHR codes from Veterans Affairs (VA) and Massachusetts General Brigham (MGB), the knowledge extraction via sparse embedding regression (KESER) algorithm was used to construct knowledge networks for the code concepts. Background and details about the method can be found at Chuan et al. (2021) <doi:10.1038/s41746-021-00519-z>.
Maintained by Su-Chun Cheng. Last updated 2 years ago.
1 stars 4.00 score 7 scripts
sigbertklinke
HKRbook:Apps and Data for the Book "Introduction to Statistics"
Functions, Shiny apps and data for the book "Introduction to Statistics" by Wolfgang Karl Härdle, Sigbert Klinke, and Bernd Rönz (2015) <doi:10.1007/978-3-319-17704-5>.
Maintained by Sigbert Klinke. Last updated 2 years ago.
1 stars 3.70 scoresigbertklinke
smvgraph:Visualization and Clustering of Data in a Shiny App
Various visualisations of univariate and multivariate graphs (e.g. mosaic diagram, scatterplot matrix, Andrews curves, parallel coordinate diagram, radar diagram and Chernoff plots) as well as clustering methods (e.g. k-means, agglomerative, EM clustering and DBSCAN) are implemented as a Shiny app. The app allows interactive changes, e.g. of the order of variables. It is intended for use in teaching.
Maintained by Sigbert Klinke. Last updated 2 years ago.
3.70 score
litgde
Spectran:Visual and Non-Visual Spectral Analysis of Light
Analyse light spectra for visual and non-visual (often called melanopic) needs, wrapped up in a Shiny App. 'Spectran' allows for the import of spectra in various CSV forms but also provides a wide range of example spectra and even the creation of own spectral power distributions. The goal of the app is to provide easy access and a visual overview of the spectral calculations underlying common parameters used in the field. It is thus ideal for educational purposes or the creation of presentation ready graphs in lighting research and application. 'Spectran' uses equations and action spectra described in CIE S026 (2018) <doi:10.25039/S026.2018>, DIN/TS 5031-100 (2021) <doi:10.31030/3287213>, and ISO/CIE 23539 (2023) <doi:10.25039/IS0.CIE.23539.2023>.
Maintained by Johannes Zauner. Last updated 6 months ago.
2 stars 3.60 score 3 scriptspoissonconsulting
shinyssdtools:ssdtools Shiny App
Shiny application for fitting species sensitivity distributions using ssdtools.
Maintained by Seb Dalgarno. Last updated 29 days ago.
3.51 score 10 scripts
yonghuidong
RawHummus:Raw Data Quality Control Tool for LC-MS System
Assess LC–MS system performance by visualizing instrument log files and monitoring raw quality control samples within a project.
Maintained by Yonghui Dong. Last updated 2 years ago.
lcmsmetabolomicsorbitrapquality-control
5 stars 3.40 score 2 scriptspoissonconsulting
bbousuite:Easily Install and Load `bbou` (Boreal cariBOU) Packages
The `bbou` suite of packages are designed to allow analysis (`bbouretro` and `bboutools`) and simulation (`bbousims`) of Boreal Caribou survival and recruitment data ('bboudata') to estimate population growth rates. A shiny app is also available (`bboushiny`).
Maintained by Ayla Pearson. Last updated 24 days ago.
3.40 score 4 scripts
a2-ai
ghqc.app:Create QC Checklists in Github Issues
A QC tool with 3 major functions: creation and management of QC log, creation and management of QC record, perform semi-automated QC tasks.
Maintained by Jenna Johnson. Last updated 8 days ago.
3.32 score 4 scriptspoissonconsulting
bboushiny:Shiny App for Analysing Boreal Caribou Surival, Recruitment and Lambda
Use Bayesian methods to calculate survival, recruitment and lambda as well as confidence intervals.
Maintained by Pearson Ayla. Last updated 3 months ago.
3.32 score 3 scripts 1 dependents
myaseen208
StabilityApp:Stability Analysis App for GEI in Multi-Environment Trials
Provides tools for Genotype by Environment Interaction (GEI) analysis, using statistical models and visualizations to assess genotype performance across environments. It helps researchers explore interaction effects, stability, and adaptability in multi-environment trials, identifying the best-performing genotypes in different conditions. Which Win Where!
Maintained by Muhammad Yaseen. Last updated 5 months ago.
ammibiplotgeiggemetstability-analysis
3.30 score
epicentre-msf
epishiny:Tools for interactive visualisation of epidemiological data
Time, place and person analysis using the R shiny web-framework.
Maintained by Paul Cambpell. Last updated 2 days ago.
10 stars 3.11 score 13 scriptspromidat
discoveR:Exploratory Data Analysis System
Performs an exploratory data analysis through a 'shiny' interface. It includes basic methods such as the mean, median, mode, normality test, among others. It also includes clustering techniques such as Principal Components Analysis, Hierarchical Clustering and the K-Means Method.
Maintained by Oldemar Rodriguez. Last updated 2 years ago.
3 stars 3.03 score 18 scripts
ptuc-stats
shinyCLT:Central Limit Theorem 'shiny' Application
A 'shiny' application estimating the operating characteristics of the Student's t-test by Student (1908) <doi:10.1093/biomet/6.1.1>, Welch's t-test by Welch (1947) <doi:10.1093/biomet/34.1-2.28>, and Wilcoxon test by Wilcoxon (1945) <doi:10.2307/3001968> in one-sample or two-sample cases, in settings defined by the user (conditional distribution, sample size per group, location parameter per group, nuisance parameter per group), using Monte Carlo simulations Malvin H. Kalos, Paula A. Whitlock (2008) <doi:10.1002/9783527626212>.
Maintained by Dominique-Laurent Couturier. Last updated 1 months ago.
3.00 score
f-neri
FAST.R:Analyze and Visualize FAST-Generated Data
R 'shiny' app to perform data analysis and visualization for the Fully Automated Senescence Test (FAST) workflow.
Maintained by Francesco Neri. Last updated 8 months ago.
1 stars 3.00 score 6 scripts
markheckmann
OpenRepGrid.ic:Interpretive Clustering for Repertory Grids
Shiny UI to identify cliques of related constructs in repertory grid data. See Burr, King, & Heckmann (2020) <doi:10.1080/14780887.2020.1794088> for a description of the interpretive clustering (IC) method.
Maintained by Mark Heckmann. Last updated 1 years ago.
clusteringconstructsgridrepertoryrepgridshiny
2 stars 3.00 score 8 scriptsmyaseen208
PakNAcc:'shiny' App for National Accounts
Provides a comprehensive suite of tools for analyzing Pakistan's Quarterly National Accounts data. Users can gain detailed insights into Pakistan's economic performance, visualize quarterly trends, and detect patterns and anomalies in key economic indicators. Compare sector contributions—including agriculture, industry, and services—to understand their influence on economic growth or decline. Customize analyses by filtering and manipulating data to focus on specific areas of interest. Ideal for policymakers, researchers, and analysts aiming to make informed, data-driven decisions based on timely and detailed economic insights.
Maintained by Muhammad Yaseen. Last updated 5 months ago.
3.00 scorepoissonconsulting
shinywqg:Water Quality Guideline Shiny App
User interface to calculate water quality guidelines.
Maintained by Pearson Ayla. Last updated 2 months ago.
3.00 score 1 scripts
susantohp
irtawsi:Items Response Theory Analysis with Steps and Interpretation
Dichotomous and polytomous data analysis and their scoring using the unidimensional Item Response Theory model (Chalmers (2012) <doi:10.18637/jss.v048.i06>) with user-friendly graphic User Interface. Suitable for beginners who are learning item response theory.
Maintained by Hari Purnomo Susanto. Last updated 9 months ago.
1 stars 3.00 score 1 scriptsmyaseen208
PakPC:'shiny' App to Analyze Pakistan's Population Census Data
Provides tools for analyzing Pakistan's Population Censuses data via the 'PakPC2023' and 'PakPC2017' R packages. Designed for researchers, policymakers, and professionals, the app enables in-depth numerical and graphical analysis, including detailed cross-tabulations and insights. With diverse statistical models and visualization options, it supports informed decision-making in social and economic policy. This tool enhances users' ability to explore and interpret census data, providing valuable insights for effective planning and analysis across various fields.
Maintained by Muhammad Yaseen. Last updated 4 months ago.
1 stars 3.00 score 4 scripts
learnitr
learnitdashboard:Shiny Dashboard for 'learnitr' Data
A dashboard to explore data generated by 'learnitr' code, such as the 'learnitdown', or the 'learnitgrid' R package. This is a lightweight learning analytics solution for the 'learnitr' ecosystem.
Maintained by Philippe Grosjean. Last updated 10 months ago.
learning-analyticsteaching-tools
2 stars 3.00 score 3 scripts
imares-group
glossa:User-Friendly 'shiny' App for Bayesian Species Distribution Models
A user-friendly 'shiny' application for Bayesian machine learning analysis of marine species distributions. GLOSSA (Global Species Spatiotemporal Analysis) uses Bayesian Additive Regression Trees (BART; Chipman, George, and McCulloch (2010) <doi:10.1214/09-AOAS285>) to model species distributions with intuitive workflows for data upload, processing, model fitting, and result visualization. It supports presence-absence and presence-only data (with pseudo-absence generation), spatial thinning, cross-validation, and scenario-based projections. GLOSSA is designed to facilitate ecological research by providing easy-to-use tools for analyzing and visualizing marine species distributions across different spatial and temporal scales.
Maintained by Jorge Mestre-Tomás. Last updated 4 months ago.
1 stars 3.00 score 5 scriptspoissonconsulting
shinywqbench:R Shiny App to Calculates Aquatic Life Benchmarks
This package is the user interface to the wqbench R package and allows users to easily access standardized ecotoxicology data for thousands of chemicals. Either a SSD or deterministic method is used to determine the critical toxicity value and assessment factors to compute the aquatic life water quality benchmark for a compound.
Maintained by Angeline Tillmanns. Last updated 24 days ago.
2.95 score 2 scripts
obenno
scSpotlight:A Single Cell Analysis Shiny App
A single cell analysis (viewer) app based on Seurat.
Maintained by Zhixia Xiao. Last updated 8 months ago.
2 stars 2.78 score
iiasa
ODPSCP:A standard reporting protocol for conservation planning
This repository contains the environment and shiny code underlying the reporting protocol.
Maintained by Martin Jung. Last updated 2 days ago.
conservation-prioritizationprotocolr-shinystandardsystematic-conservation-planning
1 stars 2.70 score 1 scriptsyonghuidong
CCWeights:Perform Weighted Linear Regression for Calibration Curve
Automated assessment and selection of weighting factors for accurate quantification using linear calibration curve. In addition, a 'shiny' App is provided, allowing users to analyze their data using an interactive graphical user interface, without any programming requirements.
Maintained by Yonghui Dong. Last updated 3 years ago.
analytical-chemistrycalibration-curves
2.70 score
yaoxiangli
ShinyLink:'Shiny' Based Record Linkage Tool
A bridge is created between existing robust open-source record linkage algorithms and an urgently needed user-friendly platform that removes financial and technical barriers, setting a new standard for data interoperability in public health and bioinformatics. The 'fastLink' algorithms are used for matching. Ted Enamorado et al. (2019) <doi:10.1017/S0003055418000783>.
Maintained by Yaoxiang Li. Last updated 2 years ago.
2.70 score 6 scriptspromidat
predictoR:Predictive Data Analysis System
Perform a supervised data analysis on a database through a 'shiny' graphical interface. It includes methods such as K-Nearest Neighbors, Decision Trees, ADA Boosting, Extreme Gradient Boosting, Random Forest, Neural Networks, Deep Learning, Support Vector Machines and Bayesian Methods.
Maintained by Oldemar Rodriguez. Last updated 1 years ago.
1 stars 2.60 score 3 scriptspromidat
forecasteR:Time Series Forecast System
A web application for displaying, analysing and forecasting univariate time series. Includes basic methods such as mean, naïve, seasonal naïve and drift, as well as more complex methods such as Holt-Winters Box,G and Jenkins, G (1976) <doi:10.1111/jtsa.12194> and ARIMA Brockwell, P.J. and R.A.Davis (1991) <doi:10.1007/978-1-4419-0320-4>.
Maintained by Oldemar Rodriguez. Last updated 2 years ago.
2.00 score 2 scripts
cran
tRigon:Toolbox for Integrative Pathomics Analysis
Processing and analysis of pathomics, omics and other medical datasets. 'tRigon' serves as a toolbox for descriptive and statistical analysis, correlations, plotting and many other methods for exploratory analysis of high-dimensional datasets.
Maintained by David Hoelscher. Last updated 7 months ago.
2.00 score
snthomas99
clinDR:Simulation and Analysis Tools for Clinical Dose Response Modeling
Bayesian and ML Emax model fitting, graphics and simulation for clinical dose response. The summary data from the dose response meta-analyses in Thomas, Sweeney, and Somayaji (2014) <doi:10.1080/19466315.2014.924876> and Thomas and Roy (2016) <doi:10.1080/19466315.2016.1256229> Wu, Banerjee, Jin, Menon, Martin, and Heatherington(2017) <doi:10.1177/0962280216684528> are included in the package. The prior distributions for the Bayesian analyses default to the posterior predictive distributions derived from these references.
Maintained by Neal Thomas. Last updated 2 years ago.
1 stars 1.85 score 71 scripts
intercapackage
interca:Multiple Correspondence Analysis Based on Interpretive Coordinates
Various functions and a Shiny app to enrich the results of Multiple Correspondence Analysis with interpretive axes and planes (see Moschidis, Markos, and Thanopoulos, 2022; <doi:10.1108/ACI-07-2022-0191>).
Maintained by Stratos Moschidis. Last updated 2 years ago.
1.70 score 1 scripts
calderonsamuel
appReporteAvance:Reporte de avances de oficina
Las personas de la oficina usan esta app para reportar el estado de avance de sus actividades específicas.
Maintained by Samuel Calderon. Last updated 1 years ago.
1 stars 1.70 score 2 scripts
jacqueline-98
mergenstudio:'Mergen' Studio: An 'RStudio' Addin Wrapper for the 'Mergen' Package
An 'RStudio' Addin wrapper for the 'mergen' package. This package employs artificial intelligence to convert data analysis questions into executable code, explanations, and algorithms. This package makes it easier to use Large Language Models in your development environment by providing a chat-like interface, while also allowing you to inspect and execute the returned code.
Maintained by Jacqueline Jansen. Last updated 9 months ago.
1.70 score 1 scriptscran
regressoR:Regression Data Analysis System
Perform a supervised data analysis on a database through a 'shiny' graphical interface. It includes methods such as linear regression, penalized regression, k-nearest neighbors, decision trees, ada boosting, extreme gradient boosting, random forest, neural networks, deep learning and support vector machines.
Maintained by Oldemar Rodriguez. Last updated 5 months ago.
2 stars 1.30 score
bairuzhang
INSPECTumours:IN-vivo reSPonsE Classification of Tumours
This is a shiny app used for the statistical classifying and analysing pre-clinical tumour responses.
Maintained by Bairu Zhang. Last updated 3 years ago.
1.00 score 3 scripts
wilsonrp
T2Qv:Control Qualitative Variables
Covers k-table control analysis using multivariate control charts for qualitative variables using fundamentals of multiple correspondence analysis and multiple factor analysis. The graphs can be shown in a flat or interactive way, in the same way all the outputs can be shown in an interactive shiny panel.
Maintained by Wilson Rojas-Preciado. Last updated 1 years ago.
1.00 score
javierrojasc
AovBay:Classic, Nonparametric and Bayesian One-Way Analysis of Variance Panel
It covers various approaches to analysis of variance, provides an assumption testing section in order to provide a decision diagram that allows selecting the most appropriate technique. It provides the classical analysis of variance, the nonparametric equivalent of Kruskal Wallis, and the Bayesian approach. These results are shown in an interactive shiny panel, which allows modifying the arguments of the tests, contains interactive graphics and presents automatic conclusions depending on the tests in order to contribute to the interpretation of these analyzes. 'AovBay' uses 'Stan' and 'FactorBayes' for Bayesian analysis and 'Highcharts' for interactive charts.
Maintained by Mauricio Rojas-Campuzano. Last updated 4 years ago.
1.00 score