Showing 4 of total 4 results (show query)
neurogenomics
rworkflows:Test, Document, Containerise, and Deploy R Packages
Reproducibility is essential to the progress of research, yet achieving it remains elusive even in computational fields. Continuous Integration (CI) platforms offer a powerful way to launch automated workflows to check and document code, but often require considerable time, effort, and technical expertise to setup. We therefore developed the rworkflows suite to make robust CI workflows easy and freely accessible to all R package developers. rworkflows consists of 1) a CRAN/Bioconductor-compatible R package template, 2) an R package to quickly implement a standardised workflow, and 3) a centrally maintained GitHub Action.
Maintained by Brian Schilder. Last updated 2 months ago.
softwareworkflowmanagementbioconductorcontainerscontinuous-integrationdockerdockerhubgithub-actionsreproducibilityworkflows
79 stars 7.60 score 6 scripts
ropensci
tic:Tasks Integrating Continuously: CI-Agnostic Workflow Definitions
Provides a way to describe common build and deployment workflows for R-based projects: packages, websites (e.g. blogdown, pkgdown), or data processing (e.g. research compendia). The recipe is described independent of the continuous integration tool used for processing the workflow (e.g. 'GitHub Actions' or 'Circle CI'). This package has been peer-reviewed by rOpenSci (v0.3.0.9004).
Maintained by Eli Miller. Last updated 2 months ago.
appveyorcontinuous-integrationdeploymentgithubactionstravis-ci
155 stars 7.57 score 16 scripts
inbo
checklist:A Thorough and Strict Set of Checks for R Packages and Source Code
An opinionated set of rules for R packages and R source code projects.
Maintained by Thierry Onkelinx. Last updated 1 months ago.
checklistcontinuous-integrationcontinuous-testingquality-assurance
19 stars 7.24 score 21 scripts 2 dependentsropensci
circle:R Client Package for Circle CI
Tools for interacting with the 'Circle CI' API (<https://circleci.com/docs/api/v2/>). Besides executing common tasks such as querying build logs and restarting builds, this package also helps setting up permissions to deploy from builds.
Maintained by Patrick Schratz. Last updated 3 months ago.
api-clientcircle-cicontinuous-deploymentcontinuous-integration
12 stars 5.86 score 3 scripts