Showing 6 of total 6 results (show query)
bioc
GenomicDataCommons:NIH / NCI Genomic Data Commons Access
Programmatically access the NIH / NCI Genomic Data Commons RESTful service.
Maintained by Sean Davis. Last updated 2 months ago.
dataimportsequencingapi-clientbioconductorbioinformaticscancercore-servicesdata-sciencegenomicsncitcgavignette
87 stars 11.94 score 238 scripts 12 dependents
citoverse
cito:Building and Training Neural Networks
The 'cito' package provides a user-friendly interface for training and interpreting deep neural networks (DNN). 'cito' simplifies the fitting of DNNs by supporting the familiar formula syntax, hyperparameter tuning under cross-validation, and helps to detect and handle convergence problems. DNNs can be trained on CPU, GPU and MacOS GPUs. In addition, 'cito' has many downstream functionalities such as various explainable AI (xAI) metrics (e.g. variable importance, partial dependence plots, accumulated local effect plots, and effect estimates) to interpret trained DNNs. 'cito' optionally provides confidence intervals (and p-values) for all xAI metrics and predictions. At the same time, 'cito' is computationally efficient because it is based on the deep learning framework 'torch'. The 'torch' package is native to R, so no Python installation or other API is required for this package.
Maintained by Maximilian Pichler. Last updated 3 months ago.
machine-learningneural-network
42 stars 9.07 score 129 scripts 1 dependents
rezamoammadi
BDgraph:Bayesian Structure Learning in Graphical Models using Birth-Death MCMC
Advanced statistical tools for Bayesian structure learning in undirected graphical models, accommodating continuous, ordinal, discrete, count, and mixed data. It integrates recent advancements in Bayesian graphical models as presented in the literature, including the works of Mohammadi and Wit (2015) <doi:10.1214/14-BA889>, Mohammadi et al. (2021) <doi:10.1080/01621459.2021.1996377>, Dobra and Mohammadi (2018) <doi:10.1214/18-AOAS1164>, and Mohammadi et al. (2023) <doi:10.48550/arXiv.2307.00127>.
Maintained by Reza Mohammadi. Last updated 7 months ago.
8 stars 7.46 score 223 scripts 7 dependents
paws-r
paws.migration:'Amazon Web Services' Migration & Transfer Services
Interface to 'Amazon Web Services' migration & transfer services, including file and database migration to 'Amazon Web Services' <https://aws.amazon.com/>.
Maintained by Dyfan Jones. Last updated 19 days ago.
332 stars 6.90 score
glenndavis52
spacesRGB:Standard and User-Defined RGB Color Spaces, with Conversion Between RGB and CIE XYZ and Lab
Standard RGB spaces included are sRGB, 'Adobe' RGB, 'ProPhoto' RGB, BT.709, and others. User-defined RGB spaces are also possible. There is partial support for ACES Color workflows.
Maintained by Glenn Davis. Last updated 3 months ago.
3.30 score 11 scripts 3 dependents
jmcurran
tfer:Forensic Glass Transfer Probabilities
Statistical interpretation of forensic glass transfer (Simulation of the probability distribution of recovered glass fragments).
Maintained by James Curran. Last updated 5 years ago.
1.15 score 14 scripts