Showing 12 of total 12 results (show query)
bioc
IRanges:Foundation of integer range manipulation in Bioconductor
Provides efficient low-level and highly reusable S4 classes for storing, manipulating and aggregating over annotated ranges of integers. Implements an algebra of range operations, including efficient algorithms for finding overlaps and nearest neighbors. Defines efficient list-like classes for storing, transforming and aggregating large grouped data, i.e., collections of atomic vectors and DataFrames.
Maintained by Hervé Pagès. Last updated 2 months ago.
infrastructuredatarepresentationbioconductor-packagecore-package
22 stars 16.09 score 2.1k scripts 1.8k dependentsbioc
S4Vectors:Foundation of vector-like and list-like containers in Bioconductor
The S4Vectors package defines the Vector and List virtual classes and a set of generic functions that extend the semantic of ordinary vectors and lists in R. Package developers can easily implement vector-like or list-like objects as concrete subclasses of Vector or List. In addition, a few low-level concrete subclasses of general interest (e.g. DataFrame, Rle, Factor, and Hits) are implemented in the S4Vectors package itself (many more are implemented in the IRanges package and in other Bioconductor infrastructure packages).
Maintained by Hervé Pagès. Last updated 2 months ago.
infrastructuredatarepresentationbioconductor-packagecore-package
18 stars 16.05 score 1.0k scripts 1.9k dependents
bioc
rtracklayer:R interface to genome annotation files and the UCSC genome browser
Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.
Maintained by Michael Lawrence. Last updated 5 days ago.
annotationvisualizationdataimportzlibopensslcurl
12.66 score 6.7k scripts 480 dependents
jonclayden
shades:Simple Colour Manipulation
Functions for easily manipulating colours, creating colour scales and calculating colour distances.
Maintained by Jon Clayden. Last updated 6 months ago.
colorcolor-manipulationcolourcolour-manipulationcolour-spaces
83 stars 9.58 score 178 scripts 37 dependents
kwb-r
kwb.utils:General Utility Functions Developed at KWB
This package contains some small helper functions that aim at improving the quality of code developed at Kompetenzzentrum Wasser gGmbH (KWB).
Maintained by Hauke Sonnenberg. Last updated 1 years ago.
8 stars 7.33 score 12 scripts 78 dependents
richierocks
rebus:Build Regular Expressions in a Human Readable Way
Build regular expressions piece by piece using human readable code. This package is designed for interactive use. For package development, use the rebus.* dependencies.
Maintained by Richard Cotton. Last updated 8 years ago.
33 stars 6.73 score 364 scripts 3 dependents
heardacat
Ramble:Parser Combinator for R
Parser generator for R using combinatory parsers. It is inspired by combinatory parsers developed in Haskell.
Maintained by Chapman Siu. Last updated 8 years ago.
combinatory-parsersparser-combinatorsparsing
22 stars 5.93 score 39 scripts
bbuchsbaum
neuroim:Data Structures and Handling for Neuroimaging Data
A collection of data structures that represent volumetric brain imaging data. The focus is on basic data handling for 3D and 4D neuroimaging data. In addition, there are function to read and write NIFTI files and limited support for reading AFNI files.
Maintained by Bradley Buchsbaum. Last updated 4 years ago.
6 stars 5.64 score 48 scriptsrichierocks
rebus.base:Core Functionality for the 'rebus' Package
Build regular expressions piece by piece using human readable code. This package contains core functionality, and is primarily intended to be used by package developers.
Maintained by Richard Cotton. Last updated 8 years ago.
2 stars 4.81 score 31 scripts 7 dependents
mrchypark
theeuh:Write Spaces To Korean Sentences
Provides a function to write spaces to Korean sentences.
Maintained by Chanyub Park. Last updated 3 years ago.
2 stars 2.00 score
cran
EvCombR:Evidence Combination in R
Combine pieces of evidence in the form of uncertainty representations.
Maintained by Alexander Karlsson. Last updated 3 years ago.
1.00 score