Showing 4 of total 4 results (show query)
bioc
DelayedArray:A unified framework for working transparently with on-disk and in-memory array-like datasets
Wrapping an array-like object (typically an on-disk object) in a DelayedArray object allows one to perform common array operations on it without loading the object in memory. In order to reduce memory usage and optimize performance, operations on the object are either delayed or executed using a block processing mechanism. Note that this also works on in-memory array-like objects like DataFrame objects (typically with Rle columns), Matrix objects, ordinary arrays and, data frames.
Maintained by Hervé Pagès. Last updated 2 months ago.
infrastructuredatarepresentationannotationgenomeannotationbioconductor-packagecore-packageu24ca289073
27 stars 15.59 score 538 scripts 1.2k dependentsbioc
GDSArray:Representing GDS files as array-like objects
GDS files are widely used to represent genotyping or sequence data. The GDSArray package implements the `GDSArray` class to represent nodes in GDS files in a matrix-like representation that allows easy manipulation (e.g., subsetting, mathematical transformation) in _R_. The data remains on disk until needed, so that very large files can be processed.
Maintained by Xiuwen Zheng. Last updated 14 days ago.
infrastructuredatarepresentationsequencinggenotypingarray
5 stars 6.78 score 8 scripts 2 dependentsbioc
XDE:XDE: a Bayesian hierarchical model for cross-study analysis of differential gene expression
Multi-level model for cross-study detection of differential gene expression.
Maintained by Robert Scharpf. Last updated 5 months ago.
microarraydifferentialexpressioncpp
4.20 score 10 scripts
r-forge
distrSim:Simulation Classes Based on Package 'distr'
S4-classes for setting up a coherent framework for simulation within the distr family of packages.
Maintained by Peter Ruckdeschel. Last updated 2 months ago.
4.16 score 7 scripts 3 dependents