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IRanges:Foundation of integer range manipulation in Bioconductor
Provides efficient low-level and highly reusable S4 classes for storing, manipulating and aggregating over annotated ranges of integers. Implements an algebra of range operations, including efficient algorithms for finding overlaps and nearest neighbors. Defines efficient list-like classes for storing, transforming and aggregating large grouped data, i.e., collections of atomic vectors and DataFrames.
Maintained by Hervé Pagès. Last updated 2 months ago.
infrastructuredatarepresentationbioconductor-packagecore-package
22 stars 16.09 score 2.1k scripts 1.8k dependentscrunch-io
crunch:Crunch.io Data Tools
The Crunch.io service <https://crunch.io/> provides a cloud-based data store and analytic engine, as well as an intuitive web interface. Using this package, analysts can interact with and manipulate Crunch datasets from within R. Importantly, this allows technical researchers to collaborate naturally with team members, managers, and clients who prefer a point-and-click interface.
Maintained by Greg Freedman Ellis. Last updated 8 days ago.
9 stars 10.47 score 200 scripts 2 dependentsbioc
topGO:Enrichment Analysis for Gene Ontology
topGO package provides tools for testing GO terms while accounting for the topology of the GO graph. Different test statistics and different methods for eliminating local similarities and dependencies between GO terms can be implemented and applied.
Maintained by Adrian Alexa. Last updated 5 months ago.
8.96 score 2.0k scripts 20 dependentsropengov
hansard:Provides Easy Downloading Capabilities for the UK Parliament API
Provides functions to download data from the <https://explore.data.parliament.uk/> APIs. Because of the structure of the API, there is a named function for each type of available data for ease of use, as well as some functions designed to retrieve specific pieces of commonly used data. Functions for each new API will be added as and when they become available.
Maintained by Evan Odell. Last updated 2 years ago.
1 stars 2.70 scorecran
hset:Sets of Numbers Implemented with Hash Tables
Implementation of S4 class of sets and multisets of numbers. The implementation is based on the hash table from the package 'hash'. Quick operations are allowed when the set is a dynamic object. The implementation is discussed in detail in Ceoldo and Wit (2023) <arXiv:2304.09809>.
Maintained by Giacomo Ceoldo. Last updated 2 years ago.
1.00 score