Showing 18 of total 18 results (show query)
r-lib
devtools:Tools to Make Developing R Packages Easier
Collection of package development tools.
Maintained by Jennifer Bryan. Last updated 6 months ago.
2.4k stars 19.55 score 51k scripts 150 dependents
rstudio
renv:Project Environments
A dependency management toolkit for R. Using 'renv', you can create and manage project-local R libraries, save the state of these libraries to a 'lockfile', and later restore your library as required. Together, these tools can help make your projects more isolated, portable, and reproducible.
Maintained by Kevin Ushey. Last updated 3 days ago.
1.0k stars 18.59 score 1.5k scripts 114 dependents
bioconductor
BiocManager:Access the Bioconductor Project Package Repository
A convenient tool to install and update Bioconductor packages.
Maintained by Marcel Ramos. Last updated 1 months ago.
74 stars 16.47 score 2.9k scripts 414 dependentsrstudio
packrat:A Dependency Management System for Projects and their R Package Dependencies
Manage the R packages your project depends on in an isolated, portable, and reproducible way.
Maintained by Aron Atkins. Last updated 2 months ago.
406 stars 12.15 score 256 scripts 9 dependents
ropensci
rdataretriever:R Interface to the Data Retriever
Provides an R interface to the Data Retriever <https://retriever.readthedocs.io/en/latest/> via the Data Retriever's command line interface. The Data Retriever automates the tasks of finding, downloading, and cleaning public datasets, and then stores them in a local database.
Maintained by Henry Senyondo. Last updated 8 months ago.
datadata-sciencedatabasedatasetsscience
46 stars 7.70 score 36 scriptsropensci
tic:Tasks Integrating Continuously: CI-Agnostic Workflow Definitions
Provides a way to describe common build and deployment workflows for R-based projects: packages, websites (e.g. blogdown, pkgdown), or data processing (e.g. research compendia). The recipe is described independent of the continuous integration tool used for processing the workflow (e.g. 'GitHub Actions' or 'Circle CI'). This package has been peer-reviewed by rOpenSci (v0.3.0.9004).
Maintained by Eli Miller. Last updated 2 months ago.
appveyorcontinuous-integrationdeploymentgithubactionstravis-ci
155 stars 7.57 score 16 scripts
taxonomicallyinformedannotation
tima:Taxonomically Informed Metabolite Annotation
This package provides the infrastructure to perform Taxonomically Informed Metabolite Annotation.
Maintained by Adriano Rutz. Last updated 6 hours ago.
metabolite annotationchemotaxonomyscoring systemnatural productscomputational metabolomicstaxonomic distancespecialized metabolome
9 stars 6.55 score 32 scripts 2 dependents
henrikbengtsson
startup:Friendly R Startup Configuration
Adds support for R startup configuration via '.Renviron.d' and '.Rprofile.d' directories in addition to '.Renviron' and '.Rprofile' files. This makes it possible to keep private / secret environment variables separate from other environment variables. It also makes it easier to share specific startup settings by simply copying a file to a directory.
Maintained by Henrik Bengtsson. Last updated 4 months ago.
configurationenvironment-variablesstartuputility
166 stars 6.54 score 16 scripts
ankane
jetpack:A Friendly Package Manager
Manage project dependencies from your DESCRIPTION file. Create a reproducible virtual environment with minimal additional files in your project. Provides tools to add, remove, and update dependencies as well as install existing dependencies with a single function.
Maintained by Andrew Kane. Last updated 11 days ago.
242 stars 5.96 score 19 scripts
dbdahl
cargo:Functions to Define R Functions from Inlined Rust Code
Dynamically define R functions with inlined 'Rust' code. Help is provided to run 'Cargo' <https://doc.rust-lang.org/cargo/> in a manner consistent with CRAN policies in R packages using 'Rust'. The package is not official, affiliated with, nor endorsed by the Rust project.
Maintained by David B. Dahl. Last updated 8 months ago.
59 stars 5.37 score 3 scripts
analythium
deps:Dependency Management with 'roxygen'-Style Comments
Manage your source code dependencies by decorating your existing R code with special, 'roxygen'-style comments.
Maintained by Peter Solymos. Last updated 2 months ago.
dependenciespackagesreproducibility
31 stars 4.79 score 5 scripts
melff
RKernel:Yet another R kernel for Jupyter
Provides a kernel for Jupyter.
Maintained by Martin Elff. Last updated 9 days ago.
jupyterjupyter-kerneljupyter-kernelsjupyter-notebook
39 stars 4.63 score
klmr
rprofile:Load Both User-Global and Project-Specific R Profile Configurations
Use rprofile::load() inside a project '.Rprofile' file to ensure that the user-global '.Rprofile' is loaded correctly regardless of its location, and that other common resources (in particular 'renv') are also set up correctly.
Maintained by Konrad Rudolph. Last updated 4 months ago.
4 stars 3.90 score 4 scripts
r-suzuki
dateback:Collect and Install R Packages on a Specified Date with Dependencies
Works as a virtual CRAN snapshot for source packages. It automatically downloads and installs 'tar.gz' files with dependencies, all of which were available on a specific day.
Maintained by Ryota Suzuki. Last updated 11 months ago.
5 stars 3.88 score
joundso
requiRements:Helper Package to Install Packages for R
Helper function to install packages for R using an external 'requirements.txt' or a string containing diverse packages from several resources like Github or CRAN.
Maintained by Jonathan M. Mang. Last updated 2 years ago.
9 stars 3.65 score 7 scripts
natverse
natmanager:Install the 'Natverse' Packages from Scratch
Provides streamlined installation for packages from the 'natverse', a suite of R packages for computational neuroanatomy built on top of the 'nat' 'NeuroAnatomy Toolbox' package. Installation of the complete 'natverse' suite requires a 'GitHub' user account and personal access token 'GITHUB_PAT'. 'natmanager' will help the end user set this up if necessary.
Maintained by Gregory Jefferis. Last updated 8 months ago.
4 stars 3.30 score 1 scripts
dipterix
ravemanager:Manage 'RAVE' Packages
Manages installation, upgrade, and removal of packages and corresponding dependence for the project 'RAVE' (R Analysis and Visualization for 'iEEG').
Maintained by Zhengjia Wang. Last updated 15 days ago.
2.74 score 1 scripts
rickhelmus
patRoonInst:Manages 'patRoon' Installations
Installs and updates patRoon and its dependencies.
Maintained by Rick Helmus. Last updated 2 months ago.
2.00 score 1 scripts