Showing 26 of total 26 results (show query)
henrikbengtsson
R.utils:Various Programming Utilities
Utility functions useful when programming and developing R packages.
Maintained by Henrik Bengtsson. Last updated 1 years ago.
63 stars 13.74 score 5.7k scripts 814 dependents
berndbischl
BBmisc:Miscellaneous Helper Functions for B. Bischl
Miscellaneous helper functions for and from B. Bischl and some other guys, mainly for package development.
Maintained by Bernd Bischl. Last updated 2 years ago.
20 stars 10.65 score 980 scripts 68 dependents
adeverse
adegraphics:An S4 Lattice-Based Package for the Representation of Multivariate Data
Graphical functionalities for the representation of multivariate data. It is a complete re-implementation of the functions available in the 'ade4' package.
Maintained by Aurélie Siberchicot. Last updated 8 months ago.
9 stars 10.37 score 386 scripts 6 dependents
jeffreyevans
spatialEco:Spatial Analysis and Modelling Utilities
Utilities to support spatial data manipulation, query, sampling and modelling in ecological applications. Functions include models for species population density, spatial smoothing, multivariate separability, point process model for creating pseudo- absences and sub-sampling, Quadrant-based sampling and analysis, auto-logistic modeling, sampling models, cluster optimization, statistical exploratory tools and raster-based metrics.
Maintained by Jeffrey S. Evans. Last updated 26 days ago.
biodiversityconservationecologyr-spatialrasterspatialvector
110 stars 9.55 score 736 scripts 2 dependents
dkaschek
dMod:Dynamic Modeling and Parameter Estimation in ODE Models
The framework provides functions to generate ODEs of reaction networks, parameter transformations, observation functions, residual functions, etc. The framework follows the paradigm that derivative information should be used for optimization whenever possible. Therefore, all major functions produce and can handle expressions for symbolic derivatives.
Maintained by Daniel Kaschek. Last updated 23 days ago.
20 stars 8.35 score 251 scripts
flujoo
gm:Create Music with Ease
Provides a simple and intuitive high-level language for music representation. Generates and embeds music scores and audio files in 'RStudio', 'R Markdown' documents, and R 'Jupyter Notebooks'. Internally, uses 'MusicXML' <https://github.com/w3c/musicxml> to represent music, and 'MuseScore' <https://musescore.org/> to convert 'MusicXML'.
Maintained by Renfei Mao. Last updated 9 months ago.
algorithmic-compositionmusic-programmingmusicxml
207 stars 8.06 score 35 scripts
enricoschumann
textutils:Utilities for Handling Strings and Text
Utilities for handling character vectors that store human-readable text (either plain or with markup, such as HTML or LaTeX). The package provides, in particular, functions that help with the preparation of plain-text reports, e.g. for expanding and aligning strings that form the lines of such reports. The package also provides generic functions for transforming R objects to HTML and to plain text.
Maintained by Enrico Schumann. Last updated 2 months ago.
11 stars 7.37 score 47 scripts 12 dependents
vgherard
r2r:R-Object to R-Object Hash Maps
Implementation of hash tables (hash sets and hash maps) in R, featuring arbitrary R objects as keys, arbitrary hash and key-comparison functions, and customizable behaviour upon queries of missing keys.
Maintained by Valerio Gherardi. Last updated 5 months ago.
3 stars 7.36 score 82 scripts 28 dependents
dkahle
mpoly:Symbolic Computation and More with Multivariate Polynomials
Symbolic computing with multivariate polynomials in R.
Maintained by David Kahle. Last updated 4 months ago.
12 stars 6.25 score 70 scripts 7 dependents
gwidgets3
gWidgets2:Rewrite of gWidgets API for Simplified GUI Construction
Re-implementation of the 'gWidgets' API. The API is defined in this package. A second, toolkit-specific package is required to use it. At this point only 'gWidgets2tcltk' is viable.
Maintained by John Verzani. Last updated 3 years ago.
3 stars 6.00 score 78 scripts 9 dependents
adamlilith
omnibus:Helper Tools for Managing Data, Dates, Missing Values, and Text
An assortment of helper functions for managing data (e.g., rotating values in matrices by a user-defined angle, switching from row- to column-indexing), dates (e.g., intuiting year from messy date strings), handling missing values (e.g., removing elements/rows across multiple vectors or matrices if any have an NA), text (e.g., flushing reports to the console in real-time); and combining data frames with different schema (copying, filling, or concatenating columns or applying functions before combining).
Maintained by Adam B. Smith. Last updated 6 months ago.
count-decimalsleap-yearmerge-listsmissing-valuesrotate-matrixsampling
4 stars 5.83 score 54 scripts 3 dependents
charnelmouse
autodb:Automatic Database Normalisation for Data Frames
Automatic normalisation of a data frame to third normal form, with the intention of easing the process of data cleaning. (Usage to design your actual database for you is not advised.) Originally inspired by the 'AutoNormalize' library for 'Python' by 'Alteryx' (<https://github.com/alteryx/autonormalize>), with various changes and improvements. Automatic discovery of functional or approximate dependencies, normalisation based on those, and plotting of the resulting "database" via 'Graphviz', with options to exclude some attributes at discovery time, or remove discovered dependencies at normalisation time.
Maintained by Mark Webster. Last updated 12 days ago.
functional-dependency-discovery
3 stars 5.64 score
bendeivide
leem:Laboratory of Teaching to Statistics and Mathematics
An educational package for teaching statistics and mathematics in both primary and higher education. The objective is to assist in the teaching/learning process, both for student study planning and teacher teaching strategies. The leem package aims to provide, in a simple yet in-depth manner, knowledge of statistics and mathematics to anyone who wants to study these areas of knowledge.
Maintained by Ben Deivide. Last updated 2 days ago.
4 stars 5.44 score 152 scripts
jmbarbone
mark:Miscellaneous, Analytic R Kernels
Miscellaneous functions and wrappers for development in other packages created, maintained by Jordan Mark Barbone.
Maintained by Jordan Mark Barbone. Last updated 2 months ago.
6 stars 4.95 score 9 scripts
cdueben
cppcontainers:'C++' Standard Template Library Containers
Use 'C++' Standard Template Library containers interactively in R. Includes sets, unordered sets, multisets, unordered multisets, maps, unordered maps, multimaps, unordered multimaps, stacks, queues, priority queues, vectors, deques, forward lists, and lists.
Maintained by Christian Düben. Last updated 2 months ago.
4.70 score 1 scripts
peekxc
simplextree:Provides Tools for Working with General Simplicial Complexes
Provides an interface to a Simplex Tree data structure, which is a data structure aimed at enabling efficient manipulation of simplicial complexes of any dimension. The Simplex Tree data structure was originally introduced by Jean-Daniel Boissonnat and Clément Maria (2014) <doi:10.1007/s00453-014-9887-3>.
Maintained by Matt Piekenbrock. Last updated 1 years ago.
rcppsimplicial-complextopological-data-analysistopologycpp
15 stars 4.56 score 16 scripts 1 dependents
djhshih
filenamer:Easy Management of File Names
Create descriptive file names with ease. New file names are automatically (but optionally) time stamped and placed in date stamped directories. Streamline your analysis pipeline with input and output file names that have informative tags and proper file extensions.
Maintained by David J. H. Shih. Last updated 12 months ago.
3.92 score 28 scripts 2 dependents
special-uor
dabr:Database Management with R
Provides functions to manage databases: select, update, insert, and delete records, list tables, backup tables as CSV files, and import CSV files as tables.
Maintained by Roberto Villegas-Diaz. Last updated 2 years ago.
4 stars 3.30 score
cran
discretization:Data Preprocessing, Discretization for Classification
A collection of supervised discretization algorithms. It can also be grouped in terms of top-down or bottom-up, implementing the discretization algorithms.
Maintained by HyunJi Kim. Last updated 3 years ago.
3 stars 2.80 score 5 dependentscran
deal:Learning Bayesian Networks with Mixed Variables
Bayesian networks with continuous and/or discrete variables can be learned and compared from data. The method is described in Boettcher and Dethlefsen (2003), <doi:10.18637/jss.v008.i20>.
Maintained by Claus Dethlefsen. Last updated 2 years ago.
2.70 score
bioc
clustComp:Clustering Comparison Package
clustComp is a package that implements several techniques for the comparison and visualisation of relationships between different clustering results, either flat versus flat or hierarchical versus flat. These relationships among clusters are displayed using a weighted bi-graph, in which the nodes represent the clusters and the edges connect pairs of nodes with non-empty intersection; the weight of each edge is the number of elements in that intersection and is displayed through the edge thickness. The best layout of the bi-graph is provided by the barycentre algorithm, which minimises the weighted number of crossings. In the case of comparing a hierarchical and a non-hierarchical clustering, the dendrogram is pruned at different heights, selected by exploring the tree by depth-first search, starting at the root. Branches are decided to be split according to the value of a scoring function, that can be based either on the aesthetics of the bi-graph or on the mutual information between the hierarchical and the flat clusterings. A mapping between groups of clusters from each side is constructed with a greedy algorithm, and can be additionally visualised.
Maintained by Aurora Torrente. Last updated 5 months ago.
geneexpressionclusteringvisualization
2.60 score 1 scripts
bentaylor1
spatsurv:Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models
Bayesian inference for parametric proportional hazards spatial survival models; flexible spatial survival models. See Benjamin M. Taylor, Barry S. Rowlingson (2017) <doi:10.18637/jss.v077.i04>.
Maintained by Benjamin M. Taylor. Last updated 1 years ago.
1 stars 2.00 score 10 scriptscran
SSDforR:Functions to Analyze Single System Data
Functions to visually and statistically analyze single system data.
Maintained by Charles Auerbach. Last updated 4 days ago.
1.70 scorecran
UWHAM:Unbinned Weighted Histogram Analysis Method (UWHAM)
A method for estimating log-normalizing constants (or free energies) and expectations from multiple distributions (such as multiple generalized ensembles).
Maintained by Zhiqiang Tan. Last updated 3 years ago.
1.48 scorecran
PerMallows:Permutations and Mallows Distributions
Includes functions to work with the Mallows and Generalized Mallows Models. The considered distances are Kendall's-tau, Cayley, Hamming and Ulam and it includes functions for making inference, sampling and learning such distributions, some of which are novel in the literature. As a by-product, PerMallows also includes operations for permutations, paying special attention to those related with the Kendall's-tau, Cayley, Ulam and Hamming distances. It is also possible to generate random permutations at a given distance, or with a given number of inversions, or cycles, or fixed points or even with a given length on LIS (longest increasing subsequence).
Maintained by Ekhine Irurozki. Last updated 2 months ago.
1 stars 1.00 score
shuye2009
rIntervalTree:An Interval Tree Tool for Real Numbers
This tool can be used to build binary interval trees using real number inputs. The tree supports queries of intervals overlapping a single number or an interval (start, end). Intervals with same bounds but different names are treated as distinct intervals. Insertion of intervals is also allowed. Deletion of intervals is not implemented at this point. See Mark de Berg, Otfried Cheong, Marc van Kreveld, Mark Overmars (2008). Computational Geometry: Algorithms and Applications, for a reference.
Maintained by Shuye Pu. Last updated 6 years ago.
1.00 score 1 scripts