Showing 4 of total 4 results (show query)
renkun-ken
formattable:Create 'Formattable' Data Structures
Provides functions to create formattable vectors and data frames. 'Formattable' vectors are printed with text formatting, and formattable data frames are printed with multiple types of formatting in HTML to improve the readability of data presented in tabular form rendered in web pages.
Maintained by Kun Ren. Last updated 4 months ago.
700 stars 14.69 score 3.6k scripts 26 dependents
eddelbuettel
RcppSpdlog:R and C++ Interfaces to 'spdlog' C++ Header Library for Logging
The mature and widely-used C++ logging library 'spdlog' by Gabi Melman provides many desirable features. This package bundles these header files for easy use by R packages from both their R and C or C++ code. Explicit use via 'LinkingTo:' is also supported. Also see the 'spdl' package which enhanced this package with a consistent R and C++ interface.
Maintained by Dirk Eddelbuettel. Last updated 2 months ago.
16 stars 8.36 score 6 scripts 13 dependents
nanxstats
ssw:Striped Smith-Waterman Algorithm for Sequence Alignment using SIMD
Provides an R interface for 'SSW' (Striped Smith-Waterman) via its 'Python' binding 'ssw-py'. 'SSW' is a fast 'C' and 'C++' implementation of the Smith-Waterman algorithm for pairwise sequence alignment using Single-Instruction-Multiple-Data (SIMD) instructions. 'SSW' enhances the standard algorithm by efficiently returning alignment information and suboptimal alignment scores. The core 'SSW' library offers performance improvements for various bioinformatics tasks, including protein database searches, short-read alignments, primary and split-read mapping, structural variant detection, and read-overlap graph generation. These features make 'SSW' particularly useful for genomic applications. Zhao et al. (2013) <doi:10.1371/journal.pone.0082138> developed the original 'C' and 'C++' implementation.
Maintained by Nan Xiao. Last updated 6 months ago.
bioinformaticsreticulatesequence-alignmentsimdsmith-waterman
6 stars 5.18 score
austinrwarner
tabulog:Parsing Semi-Structured Log Files into Tabular Format
Convert semi-structured log files (such as 'Apache' access.log files) into a tabular format (data.frame) using a standard template system.
Maintained by Austin Nar. Last updated 6 years ago.
2.70 score 5 scripts