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gaurbans
ecm:Build Error Correction Models
Functions for easy building of error correction models (ECM) for time series regression.
Maintained by Gaurav Bansal. Last updated 1 years ago.
3 stars 4.11 score 62 scriptscran
aTSA:Alternative Time Series Analysis
Contains some tools for testing, analyzing time series data and fitting popular time series models such as ARIMA, Moving Average and Holt Winters, etc. Most functions also provide nice and clear outputs like SAS does, such as identify, estimate and forecast, which are the same statements in PROC ARIMA in SAS.
Maintained by Debin Qiu. Last updated 1 years ago.
1 stars 2.98 score 5 dependentscran
evclust:Evidential Clustering
Various clustering algorithms that produce a credal partition, i.e., a set of Dempster-Shafer mass functions representing the membership of objects to clusters. The mass functions quantify the cluster-membership uncertainty of the objects. The algorithms are: Evidential c-Means, Relational Evidential c-Means, Constrained Evidential c-Means, Evidential Clustering, Constrained Evidential Clustering, Evidential K-nearest-neighbor-based Clustering, Bootstrap Model-Based Evidential Clustering, Belief Peak Evidential Clustering, Neural-Network-based Evidential Clustering.
Maintained by Thierry Denoeux. Last updated 1 years ago.
2.48 score 1 dependentshmaoxian
ebGenotyping:Genotyping and SNP Detection using Next Generation Sequencing Data
Genotyping the population using next generation sequencing data is essentially important for the rare variant detection. In order to distinguish the genomic structural variation from sequencing error, we propose a statistical model which involves the genotype effect through a latent variable to depict the distribution of non-reference allele frequency data among different samples and different genome loci, while decomposing the sequencing error into sample effect and positional effect. An ECM algorithm is implemented to estimate the model parameters, and then the genotypes and SNPs are inferred based on the empirical Bayes method.
Maintained by Gongyi Huang. Last updated 9 years ago.
1.00 score 4 scripts