Showing 4 of total 4 results (show query)
bioc
matter:Out-of-core statistical computing and signal processing
Toolbox for larger-than-memory scientific computing and visualization, providing efficient out-of-core data structures using files or shared memory, for dense and sparse vectors, matrices, and arrays, with applications to nonuniformly sampled signals and images.
Maintained by Kylie A. Bemis. Last updated 4 months ago.
infrastructuredatarepresentationdataimportdimensionreductionpreprocessingcpp
57 stars 9.52 score 64 scripts 2 dependentsbioc
MassSpecWavelet:Peak Detection for Mass Spectrometry data using wavelet-based algorithms
Peak Detection in Mass Spectrometry data is one of the important preprocessing steps. The performance of peak detection affects subsequent processes, including protein identification, profile alignment and biomarker identification. Using Continuous Wavelet Transform (CWT), this package provides a reliable algorithm for peak detection that does not require any type of smoothing or previous baseline correction method, providing more consistent results for different spectra. See <doi:10.1093/bioinformatics/btl355} for further details.
Maintained by Sergio Oller Moreno. Last updated 4 months ago.
immunooncologymassspectrometryproteomicspeakdetection
9 stars 9.41 score 37 scripts 18 dependents
r-forge
Rwave:Time-Frequency analysis of 1-D signals
Rwave is a library of R functions which provide an environment for the Time-Frequency analysis of 1-D signals (and especially for the wavelet and Gabor transforms of noisy signals). It was originally written for Splus by Rene Carmona, Bruno Torresani, and Wen L. Hwang, first at the University of California at Irvine and then at Princeton University. Credit should also be given to Andrea Wang whose functions on the dyadic wavelet transform are included. Rwave is based on the book: "Practical Time-Frequency Analysis: Gabor and Wavelet Transforms with an Implementation in S", by Rene Carmona, Wen L. Hwang and Bruno Torresani, Academic Press, 1998. This package is no longer actively maintained. A C++ rewrite of core functionality is in progress. If you'd like to participate, please contact Christian Gunning.
Maintained by Brandon Whitcher. Last updated 13 years ago.
4.82 score 88 scripts 5 dependents
antguz
CWT:Continuous Wavelet Transformation for Spectroscopy
Fast application of Continuous Wavelet Transformation ('CWT') on time series with special attention to spectroscopy. It is written using data.table and 'C++' language and in some functions it is possible to use parallel processing to speed-up the computation over samples. Currently, only the second derivative of a Gaussian wavelet function is implemented.
Maintained by J. Antonio Guzmán Q.. Last updated 9 months ago.
1 stars 3.18 score 4 scripts