episcan:Scan Pairwise Epistasis
Searching genomic interactions with linear/logistic regression in a high-dimensional dataset is a time-consuming
task. This package provides some efficient ways to scan
epistasis in genome-wide interaction studies (GWIS). Both
case-control status (binary outcome) and quantitative phenotype
(continuous outcome) are supported (the main references: 1.
Kam-Thong, T., D. Czamara, K. Tsuda, K. Borgwardt, C. M. Lewis,
A. Erhardt-Lehmann, B. Hemmer, et al. (2011).
<doi:10.1038/ejhg.2010.196>. 2. Kam-Thong, T., B. Pütz, N.
Karbalai, B. Müller-Myhsok, and K. Borgwardt. (2011).
<doi:10.1093/bioinformatics/btr218>.)