Showing 5 of total 5 results (show query)
crunch-io
crunch:Crunch.io Data Tools
The Crunch.io service <https://crunch.io/> provides a cloud-based data store and analytic engine, as well as an intuitive web interface. Using this package, analysts can interact with and manipulate Crunch datasets from within R. Importantly, this allows technical researchers to collaborate naturally with team members, managers, and clients who prefer a point-and-click interface.
Maintained by Greg Freedman Ellis. Last updated 8 days ago.
9 stars 10.47 score 200 scripts 2 dependents
bioc
InteractionSet:Base Classes for Storing Genomic Interaction Data
Provides the GInteractions, InteractionSet and ContactMatrix objects and associated methods for storing and manipulating genomic interaction data from Hi-C and ChIA-PET experiments.
Maintained by Aaron Lun. Last updated 5 months ago.
infrastructuredatarepresentationsoftwarehiccpp
7.95 score 250 scripts 36 dependentsbioc
HiCExperiment:Bioconductor class for interacting with Hi-C files in R
R generic interface to Hi-C contact matrices in `.(m)cool`, `.hic` or HiC-Pro derived formats, as well as other Hi-C processed file formats. Contact matrices can be partially parsed using a random access method, allowing a memory-efficient representation of Hi-C data in R. The `HiCExperiment` class stores the Hi-C contacts parsed from local contact matrix files. `HiCExperiment` instances can be further investigated in R using the `HiContacts` analysis package.
Maintained by Jacques Serizay. Last updated 11 days ago.
9 stars 7.02 score 48 scripts 2 dependents
jmgirard
circumplex:Analysis and Visualization of Circular Data
Circumplex models, which organize constructs in a circle around two underlying dimensions, are popular for studying interpersonal functioning, mood/affect, and vocational preferences/environments. This package provides tools for analyzing and visualizing circular data, including scoring functions for relevant instruments and a generalization of the bootstrapped structural summary method from Zimmermann & Wright (2017) <doi:10.1177/1073191115621795> and functions for creating publication-ready tables and figures from the results.
Maintained by Jeffrey Girard. Last updated 5 months ago.
circularcircumplexdata-analysisggplot2interpersonalpsychologyrcpparmadillotidyverseopenblascppopenmp
11 stars 6.54 score 52 scripts
mkoohafkan
kfigr:Integrated Code Chunk Anchoring and Referencing for R Markdown Documents
A streamlined cross-referencing system for R Markdown documents generated with 'knitr'. R Markdown is an authoring format for generating dynamic content from R. 'kfigr' provides a hook for anchoring code chunks and a function to cross-reference document elements generated from said chunks, e.g. figures and tables.
Maintained by Michael C Koohafkan. Last updated 7 months ago.
25 stars 6.06 score 92 scripts