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tidymodels
rsample:General Resampling Infrastructure
Classes and functions to create and summarize different types of resampling objects (e.g. bootstrap, cross-validation).
Maintained by Hannah Frick. Last updated 18 days ago.
341 stars 16.72 score 5.2k scripts 79 dependents
crunch-io
crunch:Crunch.io Data Tools
The Crunch.io service <https://crunch.io/> provides a cloud-based data store and analytic engine, as well as an intuitive web interface. Using this package, analysts can interact with and manipulate Crunch datasets from within R. Importantly, this allows technical researchers to collaborate naturally with team members, managers, and clients who prefer a point-and-click interface.
Maintained by Greg Freedman Ellis. Last updated 8 days ago.
9 stars 10.47 score 200 scripts 2 dependentstidymodels
spatialsample:Spatial Resampling Infrastructure
Functions and classes for spatial resampling to use with the 'rsample' package, such as spatial cross-validation (Brenning, 2012) <doi:10.1109/IGARSS.2012.6352393>. The scope of 'rsample' and 'spatialsample' is to provide the basic building blocks for creating and analyzing resamples of a spatial data set, but neither package includes functions for modeling or computing statistics. The resampled spatial data sets created by 'spatialsample' do not contain much overhead in memory.
Maintained by Michael Mahoney. Last updated 6 months ago.
73 stars 8.19 score 118 scripts 2 dependents
thevaachandereng
bayesCT:Simulation and Analysis of Adaptive Bayesian Clinical Trials
Simulation and analysis of Bayesian adaptive clinical trials for binomial, continuous, and time-to-event data types, incorporates historical data and allows early stopping for futility or early success. The package uses novel and efficient Monte Carlo methods for estimating Bayesian posterior probabilities, evaluation of loss to follow up, and imputation of incomplete data. The package has the functionality for dynamically incorporating historical data into the analysis via the power prior or non-informative priors.
Maintained by Thevaa Chandereng. Last updated 5 years ago.
adaptivebayesian-methodsbayesian-trialclinical-trialsstatistical-power
14 stars 6.30 score 36 scripts
bioc
autonomics:Unified Statistical Modeling of Omics Data
This package unifies access to Statistal Modeling of Omics Data. Across linear modeling engines (lm, lme, lmer, limma, and wilcoxon). Across coding systems (treatment, difference, deviation, etc). Across model formulae (with/without intercept, random effect, interaction or nesting). Across omics platforms (microarray, rnaseq, msproteomics, affinity proteomics, metabolomics). Across projection methods (pca, pls, sma, lda, spls, opls). Across clustering methods (hclust, pam, cmeans). It provides a fast enrichment analysis implementation. And an intuitive contrastogram visualisation to summarize contrast effects in complex designs.
Maintained by Aditya Bhagwat. Last updated 2 months ago.
softwaredataimportpreprocessingdimensionreductionprincipalcomponentregressiondifferentialexpressiongenesetenrichmenttranscriptomicstranscriptiongeneexpressionrnaseqmicroarrayproteomicsmetabolomicsmassspectrometry
5.95 score 5 scripts
eddelbuettel
gunsales:Statistical Analysis of Monthly Background Checks of Gun Purchases
Statistical analysis of monthly background checks of gun purchases for the New York Times story "What Drives Gun Sales: Terrorism, Obama and Calls for Restrictions" at <http://www.nytimes.com/interactive/2015/12/10/us/gun-sales-terrorism-obama-restrictions.html?> is provided.
Maintained by Dirk Eddelbuettel. Last updated 8 years ago.
131 stars 5.12 score 20 scripts
admin-ebg
logib:Salary Analysis by the Swiss Federal Office for Gender Equality
Implementation of the Swiss Confederation's standard analysis model for salary analyses <https://www.ebg.admin.ch/en/equal-pay-analysis-with-logib> in R. The analysis is run at company-level and the model is intended for medium-sized and large companies. It can technically be used with 50 or more employees (apprentices, trainees/interns and expats are not included in the analysis). Employees with at least 100 employees are required by the Gender Equality Act to conduct an equal pay analysis. This package allows users to run the equal salary analysis in R, providing additional transparency with respect to the methodology and simple automation possibilities.
Maintained by Marc Stöckli. Last updated 2 months ago.
5 stars 4.30 score 4 scripts
fabnavarro
gasper:Graph Signal Processing
Provides the standard operations for signal processing on graphs: graph Fourier transform, spectral graph wavelet transform, visualization tools. It also implements a data driven method for graph signal denoising/regression, for details see De Loynes, Navarro, Olivier (2019) <arxiv:1906.01882>. The package also provides an interface to the SuiteSparse Matrix Collection, <https://sparse.tamu.edu/>, a large and widely used set of sparse matrix benchmarks collected from a wide range of applications.
Maintained by Fabien Navarro. Last updated 7 months ago.
data-sciencegraphgraph-signal-processinggraph-waveletmachine-learningspectral-graph-theorystatisticssuitesparsewavelet-transformopenblascpp
8 stars 4.03 score 27 scripts
plantbreedingbiometryaua2
rhoneycomb:Analysis of Honeycomb Selection Designs
A useful statistical tool for the construction and analysis of Honeycomb Selection Designs. More information about this type of designs: Fasoula V. (2013) <doi:10.1002/9781118497869.ch6> Fasoula V.A., and Tokatlidis I.S. (2012) <doi:10.1007/s13593-011-0034-0> Fasoulas A.C., and Fasoula V.A. (1995) <doi:10.1002/9780470650059.ch3> Tokatlidis I. (2016) <doi:10.1017/S0014479715000150> Tokatlidis I., and Vlachostergios D. (2016) <doi:10.3390/d8040029>.
Maintained by Nikos Antonetsis. Last updated 2 years ago.
3.70 score 2 scripts
kaiaragaki
thermos:Interface with IonReporter from R
thermos allows you to use the IonReporter API with R
Maintained by Kai Aragaki. Last updated 11 months ago.
2.00 score