Platypus:Single-Cell Immune Repertoire and Gene Expression Analysis
We present 'Platypus', an open-source software platform providing a user-friendly interface to investigate B-cell
receptor and T-cell receptor repertoires from scSeq
experiments. 'Platypus' provides a framework to automate and
ease the analysis of single-cell immune repertoires while also
incorporating transcriptional information involving
unsupervised clustering, gene expression and gene ontology.
This R version of 'Platypus' is part of the 'ePlatypus'
ecosystem for computational analysis of immunogenomics data:
Yermanos et al. (2021) <doi:10.1093/nargab/lqab023>, Cotet et
al. (2023) <doi:10.1093/bioinformatics/btad553>.
