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henrikbengtsson
TopDom:An Efficient and Deterministic Method for Identifying Topological Domains in Genomes
The 'TopDom' method identifies topological domains in genomes from Hi-C sequence data (Shin et al., 2016 <doi:10.1093/nar/gkv1505>). The authors published an implementation of their method as an R script (two different versions; also available in this package). This package originates from those original 'TopDom' R scripts and provides help pages adopted from the original 'TopDom' PDF documentation. It also provides a small number of bug fixes to the original code.
Maintained by Henrik Bengtsson. Last updated 4 years ago.
genomicshictopological-domains
35.7 match 21 stars 5.80 score 20 scripts 1 dependents