Showing 74 of total 74 results (show query)
dreamrs
esquisse:Explore and Visualize Your Data Interactively
A 'shiny' gadget to create 'ggplot2' figures interactively with drag-and-drop to map your variables to different aesthetics. You can quickly visualize your data accordingly to their type, export in various formats, and retrieve the code to reproduce the plot.
Maintained by Victor Perrier. Last updated 1 months ago.
addindata-visualizationggplot2rstudio-addinvisualization
1.8k stars 13.31 score 1.1k scripts 1 dependentsdreamrs
datamods:Modules to Import and Manipulate Data in 'Shiny'
'Shiny' modules to import data into an application or 'addin' from various sources, and to manipulate them after that.
Maintained by Victor Perrier. Last updated 2 days ago.
149 stars 12.02 score 174 scripts 7 dependents
r-box
boxr:Interface for the 'Box.com API'
An R interface for the remote file hosting service 'Box' (<https://www.box.com/>). In addition to uploading and downloading files, this package includes functions which mirror base R operations for local files, (e.g. box_load(), box_save(), box_read(), box_setwd(), etc.), as well as 'git' style functions for entire directories (e.g. box_fetch(), box_push()).
Maintained by Ian Lyttle. Last updated 12 months ago.
63 stars 8.65 score 238 scripts
safetygraphics
safetyGraphics:Interactive Graphics for Monitoring Clinical Trial Safety
A framework for evaluation of clinical trial safety. Users can interactively explore their data using the included 'Shiny' application.
Maintained by Jeremy Wildfire. Last updated 2 years ago.
99 stars 8.19 score 111 scripts
psychbruce
bruceR:Broadly Useful Convenient and Efficient R Functions
Broadly useful convenient and efficient R functions that bring users concise and elegant R data analyses. This package includes easy-to-use functions for (1) basic R programming (e.g., set working directory to the path of currently opened file; import/export data from/to files in any format; print tables to Microsoft Word); (2) multivariate computation (e.g., compute scale sums/means/... with reverse scoring); (3) reliability analyses and factor analyses; (4) descriptive statistics and correlation analyses; (5) t-test, multi-factor analysis of variance (ANOVA), simple-effect analysis, and post-hoc multiple comparison; (6) tidy report of statistical models (to R Console and Microsoft Word); (7) mediation and moderation analyses (PROCESS); and (8) additional toolbox for statistics and graphics.
Maintained by Han-Wu-Shuang Bao. Last updated 4 days ago.
anovadata-analysisdata-sciencelinear-modelslinear-regressionmultilevel-modelsstatisticstoolbox
176 stars 8.16 score 316 scripts 3 dependents
john-harrold
formods:'Shiny' Modules for General Tasks
'Shiny' apps can often make use of the same key elements, this package provides modules for common tasks (data upload, wrangling data, figure generation and saving the app state), and also a framework for developing. These modules can react and interact as well as generate code to create reproducible analyses.
Maintained by John Harrold. Last updated 24 days ago.
8 stars 7.94 score 100 scripts 1 dependents
cardiomoon
editData:'RStudio' Addin for Editing a 'data.frame'
An 'RStudio' addin for editing a 'data.frame' or a 'tibble'. You can delete, add or update a 'data.frame' without coding. You can get resultant data as a 'data.frame'. In the package, modularized 'shiny' app codes are provided. These modules are intended for reuse across applications.
Maintained by Keon-Woong Moon. Last updated 4 years ago.
32 stars 7.45 score 63 scripts 5 dependents
bioc
gDRimport:Package for handling the import of dose-response data
The package is a part of the gDR suite. It helps to prepare raw drug response data for downstream processing. It mainly contains helper functions for importing/loading/validating dose-response data provided in different file formats.
Maintained by Arkadiusz Gladki. Last updated 7 days ago.
softwareinfrastructuredataimport
3 stars 7.32 score 5 scripts 1 dependentsbioc
CRISPRseek:Design of guide RNAs in CRISPR genome-editing systems
The package encompasses functions to find potential guide RNAs for the CRISPR-based genome-editing systems including the Base Editors and the Prime Editors when supplied with target sequences as input. Users have the flexibility to filter resulting guide RNAs based on parameters such as the absence of restriction enzyme cut sites or the lack of paired guide RNAs. The package also facilitates genome-wide exploration for off-targets, offering features to score and rank off-targets, retrieve flanking sequences, and indicate whether the hits are located within exon regions. All detected guide RNAs are annotated with the cumulative scores of the top5 and topN off-targets together with the detailed information such as mismatch sites and restrictuion enzyme cut sites. The package also outputs INDELs and their frequencies for Cas9 targeted sites.
Maintained by Lihua Julie Zhu. Last updated 24 days ago.
immunooncologygeneregulationsequencematchingcrispr
7.18 score 51 scripts 2 dependentsjohn-harrold
ruminate:A Pharmacometrics Data Transformation and Analysis Tool
Exploration of pharmacometrics data involves both general tools (transformation and plotting) and specific techniques (non-compartmental analysis). This kind of exploration is generally accomplished by utilizing different packages. The purpose of 'ruminate' is to create a 'shiny' interface to make these tools more broadly available while creating reproducible results.
Maintained by John Harrold. Last updated 24 days ago.
2 stars 7.06 score 84 scripts
raymondbalise
rUM:R Templates from the University of Miami
This holds some r markdown and quarto templates and a template to create a research project in "R Studio".
Maintained by Raymond Balise. Last updated 13 days ago.
9 stars 6.84 score 16 scriptscardiomoon
webr:Data and Functions for Web-Based Analysis
Several analysis-related functions for the book entitled "Web-based Analysis without R in Your Computer"(written in Korean, ISBN 978-89-5566-185-9) by Keon-Woong Moon. The main function plot.htest() shows the distribution of statistic for the object of class 'htest'.
Maintained by Keon-Woong Moon. Last updated 5 years ago.
33 stars 6.80 score 181 scripts
harrison4192
autostats:Auto Stats
Automatically do statistical exploration. Create formulas using 'tidyselect' syntax, and then determine cross-validated model accuracy and variable contributions using 'glm' and 'xgboost'. Contains additional helper functions to create and modify formulas. Has a flagship function to quickly determine relationships between categorical and continuous variables in the data set.
Maintained by Harrison Tietze. Last updated 29 days ago.
6 stars 6.76 score 5 scripts 2 dependentsharrison4192
presenter:Present Data with Style
Consists of custom wrapper functions using packages 'openxlsx', 'flextable', and 'officer' to create highly formatted MS office friendly output of your data frames. These viewer friendly outputs are intended to match expectations of professional looking presentations in business and consulting scenarios. The functions are opinionated in the sense that they expect the input data frame to have certain properties in order to take advantage of the automated formatting.
Maintained by Harrison Tietze. Last updated 2 years ago.
11 stars 6.69 score 15 scripts 4 dependents
trr266
ExPanDaR:Explore Your Data Interactively
Provides a shiny-based front end (the 'ExPanD' app) and a set of functions for exploratory data analysis. Run as a web-based app, 'ExPanD' enables users to assess the robustness of empirical evidence without providing them access to the underlying data. You can export a notebook containing the analysis of 'ExPanD' and/or use the functions of the package to support your exploratory data analysis workflow. Refer to the vignettes of the package for more information on how to use 'ExPanD' and/or the functions of this package.
Maintained by Joachim Gassen. Last updated 4 years ago.
accountingedaexploratory-data-analysisfinanceopen-sciencereplicationshinyshiny-apps
156 stars 6.49 scorecardiomoon
rrtable:Reproducible Research with a Table of R Codes
Makes documents containing plots and tables from a table of R codes. Can make "HTML", "pdf('LaTex')", "docx('MS Word')" and "pptx('MS Powerpoint')" documents with or without R code. In the package, modularized 'shiny' app codes are provided. These modules are intended for reuse across applications.
Maintained by Keon-Woong Moon. Last updated 2 years ago.
3 stars 6.45 score 76 scripts 2 dependentscardiomoon
ggplotAssist:'RStudio' Addin for Teaching and Learning 'ggplot2'
An 'RStudio' addin for teaching and learning making plot using the 'ggplot2' package. You can learn each steps of making plot by clicking your mouse without coding. You can get resultant code for the plot.
Maintained by Keon-Woong Moon. Last updated 7 years ago.
79 stars 5.85 score 18 scriptsbioc
ISAnalytics:Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies
In gene therapy, stem cells are modified using viral vectors to deliver the therapeutic transgene and replace functional properties since the genetic modification is stable and inherited in all cell progeny. The retrieval and mapping of the sequences flanking the virus-host DNA junctions allows the identification of insertion sites (IS), essential for monitoring the evolution of genetically modified cells in vivo. A comprehensive toolkit for the analysis of IS is required to foster clonal trackign studies and supporting the assessment of safety and long term efficacy in vivo. This package is aimed at (1) supporting automation of IS workflow, (2) performing base and advance analysis for IS tracking (clonal abundance, clonal expansions and statistics for insertional mutagenesis, etc.), (3) providing basic biology insights of transduced stem cells in vivo.
Maintained by Francesco Gazzo. Last updated 4 months ago.
biomedicalinformaticssequencingsinglecell
3 stars 5.83 score 15 scriptsbioc
multicrispr:Multi-locus multi-purpose Crispr/Cas design
This package is for designing Crispr/Cas9 and Prime Editing experiments. It contains functions to (1) define and transform genomic targets, (2) find spacers (4) count offtarget (mis)matches, and (5) compute Doench2016/2014 targeting efficiency. Care has been taken for multicrispr to scale well towards large target sets, enabling the design of large Crispr/Cas9 libraries.
Maintained by Aditya Bhagwat. Last updated 4 months ago.
5.56 score 2 scriptsharrison4192
validata:Validate Data Frames
Functions for validating the structure and properties of data frames. Answers essential questions about a data set after initial import or modification. What are the unique or missing values? What columns form a primary key? What are the properties of the numeric or categorical columns? What kind of overlap or mapping exists between 2 columns?
Maintained by Harrison Tietze. Last updated 29 days ago.
6 stars 5.26 score 4 scripts 1 dependents
nceas
scicomptools:Tools Developed by the NCEAS Scientific Computing Support Team
Set of tools to import, summarize, wrangle, and visualize data. These functions were originally written based on the needs of the various synthesis working groups that were supported by the National Center for Ecological Analysis and Synthesis (NCEAS). These tools are meant to be useful inside and outside of the context for which they were designed.
Maintained by Angel Chen. Last updated 5 months ago.
9 stars 5.26 score 6 scriptsbioc
gDR:Umbrella package for R packages in the gDR suite
Package is a part of the gDR suite. It reexports functions from other packages in the gDR suite that contain critical processing functions and utilities. The vignette walks through the full processing pipeline for drug response analyses that the gDR suite offers.
Maintained by Arkadiusz Gladki. Last updated 5 months ago.
1 stars 5.20 score 7 scriptsharrison4192
framecleaner:Clean Data Frames
Provides a friendly interface for modifying data frames with a sequence of piped commands built upon the 'tidyverse' Wickham et al., (2019) <doi:10.21105/joss.01686> . The majority of commands wrap 'dplyr' mutate statements in a convenient way to concisely solve common issues that arise when tidying small to medium data sets. Includes smart defaults and allows flexible selection of columns via 'tidyselect'.
Maintained by Harrison Tietze. Last updated 1 years ago.
2 stars 5.18 score 5 scripts 5 dependents
fsolt
pewdata:Reproducible Retrieval of Pew Research Center Datasets
Reproducible, programmatic retrieval of survey datasets from the Pew Research Center.
Maintained by Frederick Solt. Last updated 4 years ago.
research-datawebservice-client
10 stars 5.00 score 4 scripts
ropengov
psData:Download Regularly Maintained Political Science Data Sets
This R package includes functions for gathering commonly used and regularly maintained data set in political science. It also includes functions for combining components from these data sets into variables that have been suggested in the literature, but are not regularly maintained.
Maintained by Christopher Gandrud. Last updated 2 years ago.
45 stars 4.95 score
struckma
dataquieR:Data Quality in Epidemiological Research
Data quality assessments guided by a 'data quality framework introduced by Schmidt and colleagues, 2021' <doi:10.1186/s12874-021-01252-7> target the data quality dimensions integrity, completeness, consistency, and accuracy. The scope of applicable functions rests on the availability of extensive metadata which can be provided in spreadsheet tables. Either standardized (e.g. as 'html5' reports) or individually tailored reports can be generated. For an introduction into the specification of corresponding metadata, please refer to the 'package website' <https://dataquality.qihs.uni-greifswald.de/VIN_Annotation_of_Metadata.html>.
Maintained by Stephan Struckmann. Last updated 24 days ago.
4.90 score 9 scriptspsychbruce
ChineseNames:Chinese Name Database 1930-2008
A database of Chinese surnames and Chinese given names (1930-2008). This database contains nationwide frequency statistics of 1,806 Chinese surnames and 2,614 Chinese characters used in given names, covering about 1.2 billion Han Chinese population (96.8% of the Han Chinese household-registered population born from 1930 to 2008 and still alive in 2008). This package also contains a function for computing multiple features of Chinese surnames and Chinese given names for scientific research (e.g., name uniqueness, name gender, name valence, and name warmth/competence).
Maintained by Han-Wu-Shuang Bao. Last updated 4 days ago.
big-datachinesechinese-namechinese-namesdatabasenamenames
152 stars 4.88 score 6 scriptsharrison4192
tidybins:Make Tidy Bins
Multiple ways to bin numeric columns with a tidy output. Wraps a variety of existing binning methods into one function, and includes a new method for binning by equal value, which is useful for sales data. Provides a function to automatically summarize the properties of the binned columns.
Maintained by Harrison Tietze. Last updated 10 months ago.
4 stars 4.78 score 2 scripts 1 dependents
zpneal
childfree:Access and Harmonize Childfree Demographic Data
Reads demographic data from a variety of public data sources, extracting and harmonizing variables useful for the study of childfree individuals. The identification of childfree individuals and those with other family statuses uses Neal & Neal's (2024) "A Framework for Studying Adults who Neither have Nor Want Children" <doi:10.1177/10664807231198869>; A pre-print is available at <doi:10.31234/osf.io/fa89m>.
Maintained by Zachary Neal. Last updated 10 days ago.
4.78 score 1 scripts
mcodrescu
octopus:A Database Management Tool
A database management tool built as a 'shiny' application. Connect to various databases to send queries, upload files, preview tables, and more.
Maintained by Marcus Codrescu. Last updated 1 years ago.
11 stars 4.74 score 4 scripts
crenteriam
importinegi:Download and Manage Open Data from INEGI
Download and manage data sets of statistical projects and geographic data created by Instituto Nacional de Estadistica y Geografia (INEGI). See <https://www.inegi.org.mx/>.
Maintained by Cesar Renteria. Last updated 1 years ago.
9 stars 4.65 score 4 scripts
andresfloresg
BiVariAn:Bivariate Automatic Analysis
Simplify bivariate and regression analyses by automating result generation, including summary tables, statistical tests, and customizable graphs. It supports tests for continuous and dichotomous data, as well as stepwise regression for linear, logistic, and Firth penalized logistic models. While not a substitute for tailored analysis, 'BiVariAn' accelerates workflows and is expanding features like multilingual interpretations of results.The methods for selecting significant statistical tests, as well as the predictor selection in prediction functions, can be referenced in the works of Marc Kery (2003) <doi:10.1890/0012-9623(2003)84[92:NORDIG]2.0.CO;2> and Rainer Puhr (2017) <doi:10.1002/sim.7273>.
Maintained by José Andrés Flores-García. Last updated 29 days ago.
4.54 scorebioc
ComPrAn:Complexome Profiling Analysis package
This package is for analysis of SILAC labeled complexome profiling data. It uses peptide table in tab-delimited format as an input and produces ready-to-use tables and plots.
Maintained by Petra Palenikova. Last updated 5 months ago.
massspectrometryproteomicsvisualization
4.48 score 5 scripts
regisoc
kibior:A Simple Data Management and Sharing Tool
An interface to store, retrieve, search, join and share datasets, based on Elasticsearch (ES) API. As a decentralized, FAIR and collaborative search engine and database effort, it proposes a simple push/pull/search mechanism only based on ES, a tool which can be deployed on nearly any hardware. It is a high-level R-ES binding to ease data usage using 'elastic' package (S. Chamberlain (2020)) <https://docs.ropensci.org/elastic/>, extends joins from 'dplyr' package (H. Wickham et al. (2020)) <https://dplyr.tidyverse.org/> and integrates specific biological format importation with Bioconductor packages such as 'rtracklayer' (M. Lawrence and al. (2009) <doi:10.1093/bioinformatics/btp328>) <http://bioconductor.org/packages/rtracklayer>, 'Biostrings' (H. Pagès and al. (2020) <doi:10.18129/B9.bioc.Biostrings>) <http://bioconductor.org/packages/Biostrings>, and 'Rsamtools' (M. Morgan and al. (2020) <doi:10.18129/B9.bioc.Rsamtools>) <http://bioconductor.org/packages/Rsamtools>, but also a long list of more common ones with 'rio' (C-h. Chan and al. (2018)) <https://cran.r-project.org/package=rio>.
Maintained by Régis Ongaro-Carcy. Last updated 4 years ago.
dataimportdatarepresentationthirdpartyclientdata-sciencedatabasedatasetselasticsearchelasticsearch-clientpush-pullsearchsearch-engine
3 stars 4.48 score 8 scriptsfsolt
gesisdata:Reproducible Data Retrieval from the GESIS Data Archive
Reproducible, programmatic retrieval of datasets from the GESIS Data Archive. The GESIS Data Archive <https://search.gesis.org> makes available thousands of invaluable datasets, but researchers using these datasets are caught in a bind. The archive's terms and conditions bar dissemination of downloaded datasets to third parties, but to ensure that one's work can be reproduced, assessed, and built upon by others, one must provide access to the raw data one has employed. The 'gesisdata' package cuts this knot by providing registered users with programmatic, reproducible access to GESIS datasets from within 'R'.
Maintained by Frederick Solt. Last updated 2 years ago.
6 stars 4.48 score 1 scripts
r4epi
sitrep:Report templates and helper functions for applied epidemiology
Report templates and helper functions for applied epidemiology.
Maintained by Alexander Spina. Last updated 28 days ago.
epidemiologymsfoutbreaksreport-generator
41 stars 4.46 score 9 scripts
christophergandrud
dpmr:Data Package Manager for R
Create, install, and summarise data packages that follow the Open Knowledge Foundation's Data Package Protocol.
Maintained by Christopher Gandrud. Last updated 8 years ago.
56 stars 4.45 score 5 scriptsfsolt
ropercenter:Reproducible Data Retrieval from the Roper Center Data Archive
Reproducible, programmatic retrieval of datasets from the Roper Center data archive. The Roper Center for Public Opinion Research <https://ropercenter.cornell.edu> maintains the largest archive of public opinion data in existence, but researchers using these datasets are caught in a bind. The Center's terms and conditions bar redistribution of downloaded datasets, but to ensure that one's work can be reproduced, assessed, and built upon by others, one must provide access to the raw data one employed. The `ropercenter` package cuts this knot by providing registered users with programmatic, reproducible access to Roper Center datasets from within R.
Maintained by Frederick Solt. Last updated 2 years ago.
research-datawebservice-client
5 stars 4.40 score 4 scripts
jiangyouxiang
TestAnaAPP:A 'shiny' App for Test Analysis and Visualization
This application provides exploratory and confirmatory factor analysis, classical test theory, unidimensional and multidimensional item response theory, and continuous item response model analysis, through the 'shiny' interactive interface. In addition, it offers rich functionalities for visualizing and downloading results. Users can download figures, tables, and analysis reports via the interactive interface.
Maintained by Youxiang Jiang. Last updated 4 months ago.
4 stars 4.30 score 2 scripts
cran
metaumbrella:Umbrella Review Package for R
A comprehensive range of facilities to perform umbrella reviews with stratification of the evidence in R. The package accomplishes this aim by building on three core functions that: (i) automatically perform all required calculations in an umbrella review (including but not limited to meta-analyses), (ii) stratify evidence according to various classification criteria, and (iii) generate a visual representation of the results. Note that if you are not familiar with R, the core features of this package are available from a web browser (<https://www.metaumbrella.org/>).
Maintained by Corentin J Gosling. Last updated 1 months ago.
9 stars 4.26 score
vusaverse
vvdoctor:Statistical Test App with R 'shiny'
Provides a user-friendly R 'shiny' app for performing various statistical tests on datasets. It allows users to upload data in numerous formats and perform statistical analyses. The app dynamically adapts its options based on the selected columns and supports both single and multiple column comparisons. The app's user interface is designed to streamline the process of selecting datasets, columns, and test options, making it easy for users to explore and interpret their data. The underlying functions for statistical tests are well-organized and can be used independently within other R scripts.
Maintained by Tomer Iwan. Last updated 11 months ago.
hypothesis-testingr-r-shinyshiny-appsshiny-rstatistical-testsstatisticsstats
7 stars 4.24 score 3 scriptsbioc
GUIDEseq:GUIDE-seq and PEtag-seq analysis pipeline
The package implements GUIDE-seq and PEtag-seq analysis workflow including functions for filtering UMI and reads with low coverage, obtaining unique insertion sites (proxy of cleavage sites), estimating the locations of the insertion sites, aka, peaks, merging estimated insertion sites from plus and minus strand, and performing off target search of the extended regions around insertion sites with mismatches and indels.
Maintained by Lihua Julie Zhu. Last updated 5 months ago.
immunooncologygeneregulationsequencingworkflowstepcrispr
4.23 score 14 scripts
nicolas-robette
moreparty:A Toolbox for Conditional Inference Trees and Random Forests
Additions to 'party' and 'partykit' packages : tools for the interpretation of forests (surrogate trees, prototypes, etc.), feature selection (see Gregorutti et al (2017) <arXiv:1310.5726>, Hapfelmeier and Ulm (2013) <doi:10.1016/j.csda.2012.09.020>, Altmann et al (2010) <doi:10.1093/bioinformatics/btq134>) and parallelized versions of conditional forest and variable importance functions. Also modules and a shiny app for conditional inference trees.
Maintained by Nicolas Robette. Last updated 12 months ago.
3 stars 4.18 score 8 scripts
gsk-biostatistics
tfrmtbuilder:'shiny' App Companion to the 'tfrmt' Package
Provides an interactive interface to the 'tfrmt' package. Users can import, modify, and export tables and templates with little to no code.
Maintained by Becca Krouse. Last updated 7 months ago.
5 stars 4.18 score 9 scriptspsychbruce
PsychWordVec:Word Embedding Research Framework for Psychological Science
An integrative toolbox of word embedding research that provides: (1) a collection of 'pre-trained' static word vectors in the '.RData' compressed format <https://psychbruce.github.io/WordVector_RData.pdf>; (2) a group of functions to process, analyze, and visualize word vectors; (3) a range of tests to examine conceptual associations, including the Word Embedding Association Test <doi:10.1126/science.aal4230> and the Relative Norm Distance <doi:10.1073/pnas.1720347115>, with permutation test of significance; and (4) a set of training methods to locally train (static) word vectors from text corpora, including 'Word2Vec' <doi:10.48550/arXiv.1301.3781>, 'GloVe' <doi:10.3115/v1/D14-1162>, and 'FastText' <doi:10.48550/arXiv.1607.04606>.
Maintained by Han-Wu-Shuang Bao. Last updated 4 days ago.
bertcosine-similarityfasttextglovegptlanguage-modelnatural-language-processingnlppretrained-modelspsychologysemantic-analysistext-analysistext-miningtsneword-embeddingsword-vectorsword2vec
22 stars 4.04 score 10 scriptsbioc
LinkHD:LinkHD: a versatile framework to explore and integrate heterogeneous data
Here we present Link-HD, an approach to integrate heterogeneous datasets, as a generalization of STATIS-ACT (“Structuration des Tableaux A Trois Indices de la Statistique–Analyse Conjointe de Tableaux”), a family of methods to join and compare information from multiple subspaces. However, STATIS-ACT has some drawbacks since it only allows continuous data and it is unable to establish relationships between samples and features. In order to tackle these constraints, we incorporate multiple distance options and a linear regression based Biplot model in order to stablish relationships between observations and variable and perform variable selection.
Maintained by "Laura M Zingaretti". Last updated 5 months ago.
classificationmultiplecomparisonregressionsoftware
4.00 score 2 scripts
sigbertklinke
mmstat4:Access to Teaching Materials from a ZIP File or GitHub
Provides access to teaching materials for various statistics courses, including R and Python programs, Shiny apps, data, and PDF/HTML documents. These materials are stored on the Internet as a ZIP file (e.g., in a GitHub repository) and can be downloaded and displayed or run locally. The content of the ZIP file is temporarily or permanently stored. By default, the package uses the GitHub repository 'sigbertklinke/mmstat4.data.' Additionally, the package includes 'association_measures.R' from the archived package 'ryouready' by Mark Heckman and some auxiliary functions.
Maintained by Sigbert Klinke. Last updated 7 months ago.
4.00 score 1 scripts
albertoalmuinha
shinyrecipes:Gadget to Use the Data Preprocessing 'recipes' Package Interactively
This gadget allows you to use the 'recipes' package belonging to 'tidymodels' to carry out the data preprocessing tasks in an interactive way. Build your 'recipe' by dragging the variables, visually analyze your data to decide which steps to use, add those steps and pre-process your data.
Maintained by Alberto Almuiña. Last updated 5 years ago.
19 stars 3.98 score 5 scripts
pr2database
pr2database:PR2 database with shiny web interface
PR2 database See https://pr2-database.org
Maintained by Daniel Vaulot. Last updated 2 hours ago.
18s-rrnadatabaseeukaryotesmetabarcodingrrnataxonomy
80 stars 3.90 score 7 scripts
le-huynh
lehuynh:Le-Huynh Truc-Ly's R Code and Templates
Miscellaneous R functions (for graphics, data import, data transformation, and general utilities) and templates (for exploratory analysis, Bayesian modeling, and crafting scientific manuscripts).
Maintained by Truc-Ly Le-Huynh. Last updated 10 months ago.
3 stars 3.88 score 4 scripts
repboxr
repboxReg:Repbox module for analysing regressions
Repbox module for analysing regressions
Maintained by Sebastian Kranz. Last updated 2 months ago.
3.71 score 6 scripts 2 dependents
tmungle
allMT:Acute Lymphoblastic Leukemia Maintenance Therapy Analysis
Evaluates acute lymphoblastic leukemia maintenance therapy practice at patient and cohort level.
Maintained by Tushar Mungle. Last updated 1 months ago.
3.70 score 2 scripts
truenomad
epiCleanr:A Tidy Solution for Epidemiological Data
Offers a tidy solution for epidemiological data. It houses a range of functions for epidemiologists and public health data wizards for data management and cleaning.
Maintained by Mohamed A. Yusuf. Last updated 1 years ago.
3.70 score 4 scripts
lcbc-uio
Conversions:Collection of functions that convert certain RAW data in the LCBC database
Collection of functions that convert certain RAW data in the LCBC database.
Maintained by Athanasia Monika Mowinckel. Last updated 4 years ago.
3.65 score 10 scriptsharrison4192
TidyConsultant:Tidy Consultant Universe
Loads the 5 packages in the Tidy Consultant Universe. This collection of packages is useful for anyone doing data science, data analysis, or quantitative consulting. The functions in these packages range from data cleaning, data validation, data binning, statistical modeling, and file exporting.
Maintained by Harrison Tietze. Last updated 10 months ago.
8 stars 3.60 score 2 scripts
corentinjgosling
metaConvert:An Automatic Suite for Estimation of Various Effect Size Measures
Automatically estimate 11 effect size measures from a well-formatted dataset. Various other functions can help, for example, removing dependency between several effect sizes, or identifying differences between two datasets. This package is mainly designed to assist in conducting a systematic review with a meta-analysis but can be useful to any researcher interested in estimating an effect size.
Maintained by Corentin J. Gosling. Last updated 5 months ago.
3.48 score 3 scripts 1 dependents
repboxr
repboxRun:Run repbox analyses
Run repbox analyses
Maintained by Sebastian Kranz. Last updated 2 months ago.
3.36 score 11 scripts 1 dependents
ccasement
NormalityAssessment:A Graphical User Interface for Testing Normality Visually
Package including an interactive Shiny application for testing normality visually.
Maintained by Christopher Casement. Last updated 2 years ago.
2.70 score
pdparker
cloudstoR:Simplifies Access to Cloudstor API
Access Cloudstor via their WebDAV API. This package can read, write, and navigate Cloudstor from R.
Maintained by Taren Sanders. Last updated 3 years ago.
1 stars 2.70 score 7 scriptsccasement
DistPlotter:A Graphical User Interface for Plotting Common Univariate Distributions
Package including an interactive Shiny application for plotting common univariate distributions.
Maintained by Christopher Casement. Last updated 2 years ago.
2.70 score
chriscpritchard
PRISMA2020:Make Interactive 'PRISMA' Flow Diagrams
Systematic reviews should be described in a high degree of methodological detail. The 'PRISMA' Statement calls for a high level of reporting detail in systematic reviews and meta-analyses. An integral part of the methodological description of a review is a flow diagram. This package produces an interactive flow diagram that conforms to the 'PRISMA2020' preprint. When made interactive, the reader/user can click on each box and be directed to another website or file online (e.g. a detailed description of the screening methods, or a list of excluded full texts), with a mouse-over tool tip that describes the information linked to in more detail. Interactive versions can be saved as HTML files, whilst static versions for inclusion in manuscripts can be saved as HTML, PDF, PNG, SVG, PS or WEBP files.
Maintained by Chris Pritchard. Last updated 2 years ago.
1 stars 2.46 score 29 scriptspr2database
metapr2:Eukaryotic 18S rRNA metabarcode database
Provides an interface to the metaPR2 database (current version = 1.0) which contains eukaryotic 18S rRNA metabarcodes. Many options for selecting samples are provided. Data can be displayed as maps, barplots, treemaps. Data can be searched and downloaded. See https://pr2-database.org for more information.
Maintained by Daniel Vaulot. Last updated 1 years ago.
18s-rrnametabarcodingshiny-apps
3 stars 2.18 score
elakkkk
istat:Download and Manipulate Data from Istat
Download data from Istat (Italian Institute of Statistics) database, both old and new provider (respectively, <http://dati.istat.it/> and <https://esploradati.istat.it/databrowser/>). Additional functions for manipulating data are provided. Moreover, a 'shiny' application called 'shinyIstat' can be used to search, download and filter datasets in an easier way.
Maintained by Elena Gradi. Last updated 7 months ago.
2.00 score 2 scripts
aalborg-intelligence
aai:Functions, apps, exercises and other R related stuff used in "AI - Aalborg Intelligence"
Functions, apps, exercises and other R related stuff used in "AI - Aalborg Intelligence" The project (2020 - 2026) is supported by the Novo Nordisk Foundation to develop teaching material to be used in the Danish highschools to strengthen the understanding of AI while explaining how basic maths is used in the some popular AI methods.
Maintained by Ege Rubak. Last updated 2 years ago.
1 stars 1.70 score 1 scriptslcbc-uio
eprimeParser:LCBC E-prime data processing pipeline
This package contains functions to process the eprime data for LCBC. The functions are adaptations of scripts James Michael Roe made, that Athanasia Monika Mowinckel converted.
Maintained by Athanasia Mo Mowinckel. Last updated 6 years ago.
1.70 score 1 scripts
patauchi
heterogen:Spatial Functions for Heterogeneity and Climate Variability
A comprehensive suite of spatial functions created to analyze and assess data heterogeneity and climate variability in spatial datasets. This package is specifically designed to address the challenges associated with characterizing and understanding complex spatial patterns in environmental and climate-related data.
Maintained by P.Joser Atauchi. Last updated 2 years ago.
1.70 scorecran
ISRaD:Tools and Data for the International Soil Radiocarbon Database
This is the central location for data and tools for the development, maintenance, analysis, and deployment of the International Soil Radiocarbon Database (ISRaD). ISRaD was developed as a collaboration between the U.S. Geological Survey Powell Center and the Max Planck Institute for Biogeochemistry. This R package provides tools for accessing and manipulating ISRaD data, compiling local data using the ISRaD data structure, and simple query and reporting functions for ISRaD. For more detailed information visit the ISRaD website at: <https://soilradiocarbon.org/>.
Maintained by Jeffrey Beem-Miller. Last updated 2 years ago.
1.00 scorecran
welo:Weighted and Standard Elo Rates
Estimates the standard and weighted Elo (WElo, Angelini et al., 2022 <doi:10.1016/j.ejor.2021.04.011>) rates. The current version provides Elo and WElo rates for tennis, according to different systems of weights (games or sets) and scale factors (constant, proportional to the number of matches, with more weight on Grand Slam matches or matches played on a specific surface). Moreover, the package gives the possibility of estimating the (bootstrap) standard errors for the rates. Finally, the package includes betting functions that automatically select the matches on which place a bet.
Maintained by Vincenzo Candila. Last updated 1 years ago.
1.00 scorerepboxr
repboxverse:Install and load all repbox packages
Install and load all repbox packages
Maintained by Sebastian Kranz. Last updated 1 years ago.
1.00 score
tvedebrink
genogeographer:Methods for Analysing Forensic Ancestry Informative Markers
Evaluates likelihood ratio tests for alleged ancestry. Implements the methods of Tvedebrink et al (2018) <doi:10.1016/j.tpb.2017.12.004>.
Maintained by Torben Tvedebrink. Last updated 6 years ago.
1 stars 1.00 score 6 scripts