Showing 1 of total 1 results (show query)
igordot
msigdbr:MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format
Provides the 'Molecular Signatures Database' (MSigDB) gene sets typically used with the 'Gene Set Enrichment Analysis' (GSEA) software (Subramanian et al. 2005 <doi:10.1073/pnas.0506580102>, Liberzon et al. 2015 <doi:10.1016/j.cels.2015.12.004>, Castanza et al. 2023 <doi:10.1038/s41592-023-02014-7>) as an R data frame. The package includes the human genes as listed in MSigDB as well as the corresponding symbols and IDs for frequently studied model organisms such as mouse, rat, pig, fly, and yeast.
Maintained by Igor Dolgalev. Last updated 14 days ago.
enrichment-analysisgene-setsgenomicsgseamsigdbpathway-analysispathways
73 stars 12.20 score 3.6k scripts 20 dependents