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zellkonverter:Conversion Between scRNA-seq Objects
Provides methods to convert between Python AnnData objects and SingleCellExperiment objects. These are primarily intended for use by downstream Bioconductor packages that wrap Python methods for single-cell data analysis. It also includes functions to read and write H5AD files used for saving AnnData objects to disk.
Maintained by Luke Zappia. Last updated 24 days ago.
singlecelldataimportdatarepresentationbioconductorconversionscrna-seq
159 stars 11.25 score 660 scripts 4 dependentsbioc
MuData:Serialization for MultiAssayExperiment Objects
Save MultiAssayExperiments to h5mu files supported by muon and mudata. Muon is a Python framework for multimodal omics data analysis. It uses an HDF5-based format for data storage.
Maintained by Ilia Kats. Last updated 1 months ago.
dataimportanndatabioconductormudatamulti-omicsmultimodal-omicsscrna-seq
5 stars 5.89 score 26 scripts