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fischuu
hoardeR:Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices
Cross-species identification of novel gene candidates using the NCBI web service is provided. Further, sets of miRNA target genes can be identified by using the targetscan.org API.
Maintained by Daniel Fischer. Last updated 12 months ago.
1 stars 3.70 score 6 scripts
bioc
eudysbiome:Cartesian plot and contingency test on 16S Microbial data
eudysbiome a package that permits to annotate the differential genera as harmful/harmless based on their ability to contribute to host diseases (as indicated in literature) or unknown based on their ambiguous genus classification. Further, the package statistically measures the eubiotic (harmless genera increase or harmful genera decrease) or dysbiotic(harmless genera decrease or harmful genera increase) impact of a given treatment or environmental change on the (gut-intestinal, GI) microbiome in comparison to the microbiome of the reference condition.
Maintained by Xiaoyuan Zhou. Last updated 5 months ago.
3.60 score 2 scripts