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bioc
pRoloc:A unifying bioinformatics framework for spatial proteomics
The pRoloc package implements machine learning and visualisation methods for the analysis and interogation of quantitiative mass spectrometry data to reliably infer protein sub-cellular localisation.
Maintained by Lisa Breckels. Last updated 3 days ago.
immunooncologyproteomicsmassspectrometryclassificationclusteringqualitycontrolbioconductorproteomics-dataspatial-proteomicsvisualisationopenblascpp
15 stars 10.31 score 101 scripts 2 dependentsbioc
SubCellBarCode:SubCellBarCode: Integrated workflow for robust mapping and visualizing whole human spatial proteome
Mass-Spectrometry based spatial proteomics have enabled the proteome-wide mapping of protein subcellular localization (Orre et al. 2019, Molecular Cell). SubCellBarCode R package robustly classifies proteins into corresponding subcellular localization.
Maintained by Taner Arslan. Last updated 5 months ago.
proteomicsmassspectrometryclassification
3.78 score 1 scripts