Showing 4 of total 4 results (show query)
bioc
scone:Single Cell Overview of Normalized Expression data
SCONE is an R package for comparing and ranking the performance of different normalization schemes for single-cell RNA-seq and other high-throughput analyses.
Maintained by Davide Risso. Last updated 1 months ago.
immunooncologynormalizationpreprocessingqualitycontrolgeneexpressionrnaseqsoftwaretranscriptomicssequencingsinglecellcoverage
53 stars 9.00 score 104 scripts
bsaul
inferference:Methods for Causal Inference with Interference
Provides methods for estimating causal effects in the presence of interference described in B. Saul and M. Hugdens (2017) <doi:10.18637/jss.v082.i02>. Currently it implements the inverse-probability weighted (IPW) estimators proposed by E.J. Tchetgen Tchetgen and T.J. Vanderweele (2012) <doi:10.1177/0962280210386779>.
Maintained by Bradley Saul. Last updated 4 years ago.
6 stars 5.47 score 49 scripts
paulvanderlaken
ppsr:Predictive Power Score
The Predictive Power Score (PPS) is an asymmetric, data-type-agnostic score that can detect linear or non-linear relationships between two variables. The score ranges from 0 (no predictive power) to 1 (perfect predictive power). PPS can be useful for data exploration purposes, in the same way correlation analysis is. For more information on PPS, see <https://github.com/paulvanderlaken/ppsr>.
Maintained by Paul van der Laken. Last updated 1 years ago.
74 stars 4.98 score 26 scripts
cran
MariNET:Build Network Based on Linear Mixed Models from EHRs
Analyzing longitudinal clinical data from Electronic Health Records (EHRs) using linear mixed models (LMM) and visualizing the results as networks. It includes functions for fitting LMM, normalizing adjacency matrices, and comparing networks. The package is designed for researchers in clinical and biomedical fields who need to model longitudinal data and explore relationships between variables For more details see Bates et al. (2015) <doi:10.18637/jss.v067.i01>.
Maintained by Vargas-Fernández Marina. Last updated 8 days ago.
2.00 score