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miRNApath:miRNApath: Pathway Enrichment for miRNA Expression Data
This package provides pathway enrichment techniques for miRNA expression data. Specifically, the set of methods handles the many-to-many relationship between miRNAs and the multiple genes they are predicted to target (and thus affect.) It also handles the gene-to-pathway relationships separately. Both steps are designed to preserve the additive effects of miRNAs on genes, many miRNAs affecting one gene, one miRNA affecting multiple genes, or many miRNAs affecting many genes.
Maintained by James M. Ward. Last updated 5 months ago.
annotationpathwaysdifferentialexpressionnetworkenrichmentmirna
4.30 score 3 scriptscran
PEIMAN2:Post-Translational Modification Enrichment, Integration, and Matching Analysis
Functions and mined database from 'UniProt' focusing on post-translational modifications to do single enrichment analysis (SEA) and protein set enrichment analysis (PSEA). Payman Nickchi, Mehdi Mirzaie, Marc Baumann, Amir Ata Saei, Mohieddin Jafari (2022) <bioRxiv:10.1101/2022.11.09.515610>.
Maintained by Payman Nickchi. Last updated 2 years ago.
2.70 score