geneExpressionFromGEO:Easily Downloads a Gene Expression Dataset from a GEO Code and
Retrieves the Gene Symbols of Its Probesets
A function that reads in the GEO code of a gene expression dataset, retrieves its data from GEO, (optionally) retrieves
the gene symbols of the dataset, and returns a simple dataframe
table containing all the data. Platforms available: GPL11532,
GPL23126, GPL6244, GPL8300, GPL80, GPL96, GPL570, GPL571,
GPL20115, GPL1293, GPL6102, GPL6104, GPL6883, GPL6884,
GPL13497, GPL14550, GPL17077, GPL6480. GEO: Gene Expression
Omnibus. ID: identifier code. The GEO datasets are downloaded
from the URL <https://ftp.ncbi.nlm.nih.gov/geo/series/>. More
information can be found in the following manuscript: Davide
Chicco, "geneExpressionFromGEO: an R package to facilitate data
reading from Gene Expression Omnibus (GEO)". Microarray Data
Analysis, Methods in Molecular Biology, volume 2401, chapter
12, pages 187-194, Springer Protocols, 2021,
<doi:10.1007/978-1-0716-1839-4_12>.
