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bioc
nipalsMCIA:Multiple Co-Inertia Analysis via the NIPALS Method
Computes Multiple Co-Inertia Analysis (MCIA), a dimensionality reduction (jDR) algorithm, for a multi-block dataset using a modification to the Nonlinear Iterative Partial Least Squares method (NIPALS) proposed in (Hanafi et. al, 2010). Allows multiple options for row- and table-level preprocessing, and speeds up computation of variance explained. Vignettes detail application to bulk- and single cell- multi-omics studies.
Maintained by Maximilian Mattessich. Last updated 1 months ago.
softwareclusteringclassificationmultiplecomparisonnormalizationpreprocessingsinglecell
6 stars 6.51 score 10 scripts