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bioc
ggspavis:Visualization functions for spatial transcriptomics data
Visualization functions for spatial transcriptomics data. Includes functions to generate several types of plots, including spot plots, feature (molecule) plots, reduced dimension plots, spot-level quality control (QC) plots, and feature-level QC plots, for datasets from the 10x Genomics Visium and other technological platforms. Datasets are assumed to be in either SpatialExperiment or SingleCellExperiment format.
Maintained by Lukas M. Weber. Last updated 5 months ago.
spatialsinglecelltranscriptomicsgeneexpressionqualitycontroldimensionreduction
3 stars 6.80 score 264 scripts