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miaViz:Microbiome Analysis Plotting and Visualization
The miaViz package implements functions to visualize TreeSummarizedExperiment objects especially in the context of microbiome analysis. Part of the mia family of R/Bioconductor packages.
Maintained by Tuomas Borman. Last updated 13 days ago.
microbiomesoftwarevisualizationbioconductormicrobiome-analysisplotting
10 stars 8.67 score 81 scripts 1 dependentsbioc
rexposome:Exposome exploration and outcome data analysis
Package that allows to explore the exposome and to perform association analyses between exposures and health outcomes.
Maintained by Xavier Escribà Montagut. Last updated 5 months ago.
softwarebiologicalquestioninfrastructuredataimportdatarepresentationbiomedicalinformaticsexperimentaldesignmultiplecomparisonclassificationclustering
5.70 score 28 scripts 1 dependentsbioc
methimpute:Imputation-guided re-construction of complete methylomes from WGBS data
This package implements functions for calling methylation for all cytosines in the genome.
Maintained by Aaron Taudt. Last updated 5 months ago.
immunooncologysoftwarednamethylationepigeneticshiddenmarkovmodelsequencingcoveragecppopenmp
4.11 score 13 scriptswaylandm
aspi:Analysis of Symmetry of Parasitic Infections
Tools for the analysis and visualization of bilateral asymmetry in parasitic infections.
Maintained by Matt Wayland. Last updated 9 years ago.
2.70 score 9 scripts