Showing 4 of total 4 results (show query)
bioc
mzR:parser for netCDF, mzXML and mzML and mzIdentML files (mass spectrometry data)
mzR provides a unified API to the common file formats and parsers available for mass spectrometry data. It comes with a subset of the proteowizard library for mzXML, mzML and mzIdentML. The netCDF reading code has previously been used in XCMS.
Maintained by Steffen Neumann. Last updated 2 months ago.
immunooncologyinfrastructuredataimportproteomicsmetabolomicsmassspectrometryzlibcpp
45 stars 12.77 score 204 scripts 44 dependents
gregorkastner
stochvol:Efficient Bayesian Inference for Stochastic Volatility (SV) Models
Efficient algorithms for fully Bayesian estimation of stochastic volatility (SV) models with and without asymmetry (leverage) via Markov chain Monte Carlo (MCMC) methods. Methodological details are given in Kastner and Frühwirth-Schnatter (2014) <doi:10.1016/j.csda.2013.01.002> and Hosszejni and Kastner (2019) <doi:10.1007/978-3-030-30611-3_8>; the most common use cases are described in Hosszejni and Kastner (2021) <doi:10.18637/jss.v100.i12> and Kastner (2016) <doi:10.18637/jss.v069.i05> and the package examples.
Maintained by Darjus Hosszejni. Last updated 5 months ago.
15 stars 7.69 score 90 scripts 8 dependents
hyunseungkang
ivmodel:Statistical Inference and Sensitivity Analysis for Instrumental Variables Model
Carries out instrumental variable estimation of causal effects, including power analysis, sensitivity analysis, and diagnostics. See Kang, Jiang, Zhao, and Small (2021) <https://muse.jhu.edu/article/804372> for details.
Maintained by Hyunseung Kang. Last updated 2 years ago.
10 stars 4.69 score 97 scripts
cran
hsphase:Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data
Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.
Maintained by Mohammad Ferdosi. Last updated 1 years ago.
1 stars 3.32 score 1 dependents