Showing 7 of total 7 results (show query)
bioc
cBioPortalData:Exposes and Makes Available Data from the cBioPortal Web Resources
The cBioPortalData R package accesses study datasets from the cBio Cancer Genomics Portal. It accesses the data either from the pre-packaged zip / tar files or from the API interface that was recently implemented by the cBioPortal Data Team. The package can provide data in either tabular format or with MultiAssayExperiment object that uses familiar Bioconductor data representations.
Maintained by Marcel Ramos. Last updated 11 days ago.
softwareinfrastructurethirdpartyclientbioconductor-packagenci-itcru24ca289073
33 stars 10.17 score 147 scripts 4 dependentsbioc
AnVIL:Bioconductor on the AnVIL compute environment
The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The AnVIL package provides end-user and developer functionality. For the end-user, AnVIL provides fast binary package installation, utitlities for working with Terra / AnVIL table and data resources, and convenient functions for file movement to and from Google cloud storage. For developers, AnVIL provides programatic access to the Terra, Leonardo, Rawls, and Dockstore RESTful programming interface, including helper functions to transform JSON responses to formats more amenable to manipulation in R.
Maintained by Marcel Ramos. Last updated 1 months ago.
8.85 score 250 scripts 11 dependents
eddelbuettel
rfoaas:R Interface to 'FOAAS'
R access to the 'FOAAS' (F... Off As A Service) web service is provided.
Maintained by Dirk Eddelbuettel. Last updated 5 months ago.
28 stars 5.23 score 6 scriptsbioc
bedbaser:A BEDbase client
A client for BEDbase. bedbaser provides access to the API at api.bedbase.org. It also includes convenience functions to import BED files into GRanges objects and BEDsets into GRangesLists.
Maintained by Andres Wokaty. Last updated 2 months ago.
softwaredataimportthirdpartyclientu24ca289073
1 stars 4.00 score 3 scripts
c3s
businessPlanR:Simple Modelling Tools for Business Plans
A collection of S4 classes, methods and functions to create and visualize business plans. Different types of cash flows can be defined, which can then be used and tabulated to create profit and loss statements, cash flow plans, investment and depreciation schedules, loan amortization schedules, etc. The methods are designed to produce handsome tables in both PDF and HTML using 'RMarkdown' or 'Shiny'.
Maintained by Meik Michalke. Last updated 2 years ago.
3.70 score 2 scripts
link-ny
OncoTree:Expose the OncoTree API for R
Expose the OncoTree API for R. OncoTree is a standardized ontology of cancer terms that is used to annotate cancer data. This package provides a set of functions to query the OncoTree API and retrieve information about cancer types, subtypes, and their relationships.
Maintained by Marcel Ramos. Last updated 11 months ago.
1.28 score 19 scriptslink-ny
GenomeNexus:Expose the GenomeNexus API as an R package
This package provides an R interface to the GenomeNexus API. GenomeNexus is a web application that annotates cancer variants with information from multiple databases. The GenomeNexus API provides programmatic access to the data and annotations available in the GenomeNexus web application.
Maintained by Marcel Ramos. Last updated 11 months ago.
1.00 score