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bxc147
Epi:Statistical Analysis in Epidemiology
Functions for demographic and epidemiological analysis in the Lexis diagram, i.e. register and cohort follow-up data. In particular representation, manipulation, rate estimation and simulation for multistate data - the Lexis suite of functions, which includes interfaces to 'mstate', 'etm' and 'cmprsk' packages. Contains functions for Age-Period-Cohort and Lee-Carter modeling and a function for interval censored data and some useful functions for tabulation and plotting, as well as a number of epidemiological data sets.
Maintained by Bendix Carstensen. Last updated 3 months ago.
4 stars 9.64 score 708 scripts 11 dependents
seborinos
NCutYX:Clustering of Omics Data of Multiple Types with a Multilayer Network Representation
Omics data come in different forms: gene expression, methylation, copy number, protein measurements and more. 'NCutYX' allows clustering of variables, of samples, and both variables and samples (biclustering), while incorporating the dependencies across multiple types of Omics data. (SJ Teran Hidalgo et al (2017), <doi:10.1186/s12864-017-3990-1>).
Maintained by Sebastian J. Teran Hidalgo. Last updated 7 years ago.
c-plus-pluscancer-genomicsclusteringcopy-number-variationdevtoolsgene-expressiongraph-algorithmsgraph-cutgraphsproteinsrcppcpp
4 stars 4.48 score 15 scripts