Showing 58 of total 58 results (show query)
tidyverse
dplyr:A Grammar of Data Manipulation
A fast, consistent tool for working with data frame like objects, both in memory and out of memory.
Maintained by Hadley Wickham. Last updated 25 days ago.
4.8k stars 24.68 score 659k scripts 7.8k dependents
plotly
plotly:Create Interactive Web Graphics via 'plotly.js'
Create interactive web graphics from 'ggplot2' graphs and/or a custom interface to the (MIT-licensed) JavaScript library 'plotly.js' inspired by the grammar of graphics.
Maintained by Carson Sievert. Last updated 3 months ago.
d3jsdata-visualizationggplot2javascriptplotlyshinywebgl
2.6k stars 19.43 score 93k scripts 797 dependents
hadley
plyr:Tools for Splitting, Applying and Combining Data
A set of tools that solves a common set of problems: you need to break a big problem down into manageable pieces, operate on each piece and then put all the pieces back together. For example, you might want to fit a model to each spatial location or time point in your study, summarise data by panels or collapse high-dimensional arrays to simpler summary statistics. The development of 'plyr' has been generously supported by 'Becton Dickinson'.
Maintained by Hadley Wickham. Last updated 5 months ago.
500 stars 18.16 score 83k scripts 3.3k dependents
bioc
clusterProfiler:A universal enrichment tool for interpreting omics data
This package supports functional characteristics of both coding and non-coding genomics data for thousands of species with up-to-date gene annotation. It provides a univeral interface for gene functional annotation from a variety of sources and thus can be applied in diverse scenarios. It provides a tidy interface to access, manipulate, and visualize enrichment results to help users achieve efficient data interpretation. Datasets obtained from multiple treatments and time points can be analyzed and compared in a single run, easily revealing functional consensus and differences among distinct conditions.
Maintained by Guangchuang Yu. Last updated 4 months ago.
annotationclusteringgenesetenrichmentgokeggmultiplecomparisonpathwaysreactomevisualizationenrichment-analysisgsea
1.1k stars 17.03 score 11k scripts 48 dependents
ddsjoberg
gtsummary:Presentation-Ready Data Summary and Analytic Result Tables
Creates presentation-ready tables summarizing data sets, regression models, and more. The code to create the tables is concise and highly customizable. Data frames can be summarized with any function, e.g. mean(), median(), even user-written functions. Regression models are summarized and include the reference rows for categorical variables. Common regression models, such as logistic regression and Cox proportional hazards regression, are automatically identified and the tables are pre-filled with appropriate column headers.
Maintained by Daniel D. Sjoberg. Last updated 4 days ago.
easy-to-usegthtml5regression-modelsreproducibilityreproducible-researchstatisticssummary-statisticssummary-tablestable1tableone
1.1k stars 17.02 score 8.2k scripts 15 dependents
kassambara
ggpubr:'ggplot2' Based Publication Ready Plots
The 'ggplot2' package is excellent and flexible for elegant data visualization in R. However the default generated plots requires some formatting before we can send them for publication. Furthermore, to customize a 'ggplot', the syntax is opaque and this raises the level of difficulty for researchers with no advanced R programming skills. 'ggpubr' provides some easy-to-use functions for creating and customizing 'ggplot2'- based publication ready plots.
Maintained by Alboukadel Kassambara. Last updated 2 years ago.
1.2k stars 16.68 score 65k scripts 409 dependentskassambara
rstatix:Pipe-Friendly Framework for Basic Statistical Tests
Provides a simple and intuitive pipe-friendly framework, coherent with the 'tidyverse' design philosophy, for performing basic statistical tests, including t-test, Wilcoxon test, ANOVA, Kruskal-Wallis and correlation analyses. The output of each test is automatically transformed into a tidy data frame to facilitate visualization. Additional functions are available for reshaping, reordering, manipulating and visualizing correlation matrix. Functions are also included to facilitate the analysis of factorial experiments, including purely 'within-Ss' designs (repeated measures), purely 'between-Ss' designs, and mixed 'within-and-between-Ss' designs. It's also possible to compute several effect size metrics, including "eta squared" for ANOVA, "Cohen's d" for t-test and 'Cramer V' for the association between categorical variables. The package contains helper functions for identifying univariate and multivariate outliers, assessing normality and homogeneity of variances.
Maintained by Alboukadel Kassambara. Last updated 2 years ago.
458 stars 15.27 score 11k scripts 432 dependents
sparklyr
sparklyr:R Interface to Apache Spark
R interface to Apache Spark, a fast and general engine for big data processing, see <https://spark.apache.org/>. This package supports connecting to local and remote Apache Spark clusters, provides a 'dplyr' compatible back-end, and provides an interface to Spark's built-in machine learning algorithms.
Maintained by Edgar Ruiz. Last updated 11 days ago.
apache-sparkdistributeddplyridelivymachine-learningremote-clusterssparksparklyr
959 stars 15.20 score 4.0k scripts 21 dependents
cynkra
dm:Relational Data Models
Provides tools for working with multiple related tables, stored as data frames or in a relational database. Multiple tables (data and metadata) are stored in a compound object, which can then be manipulated with a pipe-friendly syntax.
Maintained by Kirill Müller. Last updated 3 months ago.
data-modeldata-warehousingdatawarehousingdbidbplyrrelational-databases
511 stars 14.81 score 410 scripts 8 dependents
thomasp85
tidygraph:A Tidy API for Graph Manipulation
A graph, while not "tidy" in itself, can be thought of as two tidy data frames describing node and edge data respectively. 'tidygraph' provides an approach to manipulate these two virtual data frames using the API defined in the 'dplyr' package, as well as provides tidy interfaces to a lot of common graph algorithms.
Maintained by Thomas Lin Pedersen. Last updated 2 months ago.
graph-algorithmsgraph-manipulationigraphnetwork-analysistidyversecpp
553 stars 14.74 score 4.6k scripts 136 dependents
gergness
srvyr:'dplyr'-Like Syntax for Summary Statistics of Survey Data
Use piping, verbs like 'group_by' and 'summarize', and other 'dplyr' inspired syntactic style when calculating summary statistics on survey data using functions from the 'survey' package.
Maintained by Greg Freedman Ellis. Last updated 2 months ago.
215 stars 13.88 score 1.8k scripts 15 dependents
dieghernan
tidyterra:'tidyverse' Methods and 'ggplot2' Helpers for 'terra' Objects
Extension of the 'tidyverse' for 'SpatRaster' and 'SpatVector' objects of the 'terra' package. It includes also new 'geom_' functions that provide a convenient way of visualizing 'terra' objects with 'ggplot2'.
Maintained by Diego Hernangómez. Last updated 4 days ago.
terraggplot-extensionr-spatialrspatial
190 stars 13.59 score 1.9k scripts 25 dependents
yulab-smu
tidytree:A Tidy Tool for Phylogenetic Tree Data Manipulation
Phylogenetic tree generally contains multiple components including node, edge, branch and associated data. 'tidytree' provides an approach to convert tree object to tidy data frame as well as provides tidy interfaces to manipulate tree data.
Maintained by Guangchuang Yu. Last updated 8 months ago.
phylogenetic-treetidyversetree-data
56 stars 13.36 score 584 scripts 128 dependentsbioc
plyranges:A fluent interface for manipulating GenomicRanges
A dplyr-like interface for interacting with the common Bioconductor classes Ranges and GenomicRanges. By providing a grammatical and consistent way of manipulating these classes their accessiblity for new Bioconductor users is hopefully increased.
Maintained by Michael Love. Last updated 10 days ago.
infrastructuredatarepresentationworkflowstepcoveragebioconductordata-analysisdplyrgenomic-rangesgenomicstidy-data
144 stars 12.66 score 1.9k scripts 20 dependents
billdenney
PKNCA:Perform Pharmacokinetic Non-Compartmental Analysis
Compute standard Non-Compartmental Analysis (NCA) parameters for typical pharmacokinetic analyses and summarize them.
Maintained by Bill Denney. Last updated 29 days ago.
ncanoncompartmental-analysispharmacokinetics
73 stars 12.61 score 214 scripts 4 dependents
jthomasmock
gtExtras:Extending 'gt' for Beautiful HTML Tables
Provides additional functions for creating beautiful tables with 'gt'. The functions are generally wrappers around boilerplate or adding opinionated niche capabilities and helpers functions.
Maintained by Thomas Mock. Last updated 12 months ago.
data-sciencedata-visualizationdatascienceggplot2gtplotssparklinesparkline-graphssparklinestables
199 stars 11.45 score 2.4k scripts 3 dependents
markfairbanks
tidytable:Tidy Interface to 'data.table'
A tidy interface to 'data.table', giving users the speed of 'data.table' while using tidyverse-like syntax.
Maintained by Mark Fairbanks. Last updated 2 months ago.
460 stars 11.39 score 732 scripts 11 dependents
uupharmacometrics
xpose:Diagnostics for Pharmacometric Models
Diagnostics for non-linear mixed-effects (population) models from 'NONMEM' <https://www.iconplc.com/solutions/technologies/nonmem/>. 'xpose' facilitates data import, creation of numerical run summary and provide 'ggplot2'-based graphics for data exploration and model diagnostics.
Maintained by Benjamin Guiastrennec. Last updated 3 months ago.
diagnosticsggplot2nonmempharmacometricsxpose
62 stars 11.02 score 183 scripts 6 dependents
nathaneastwood
poorman:A Poor Man's Dependency Free Recreation of 'dplyr'
A replication of key functionality from 'dplyr' and the wider 'tidyverse' using only 'base'.
Maintained by Nathan Eastwood. Last updated 1 years ago.
base-rdata-manipulationgrammar
342 stars 10.79 score 156 scripts 27 dependents
mitchelloharawild
vitae:Curriculum Vitae for R Markdown
Provides templates and functions to simplify the production and maintenance of curriculum vitae.
Maintained by Mitchell OHara-Wild. Last updated 10 months ago.
1.2k stars 10.78 score 556 scripts
jmsigner
amt:Animal Movement Tools
Manage and analyze animal movement data. The functionality of 'amt' includes methods to calculate home ranges, track statistics (e.g. step lengths, speed, or turning angles), prepare data for fitting habitat selection analyses, and simulation of space-use from fitted step-selection functions.
Maintained by Johannes Signer. Last updated 5 months ago.
41 stars 10.54 score 418 scripts
bcgov
bcdata:Search and Retrieve Data from the BC Data Catalogue
Search, query, and download tabular and 'geospatial' data from the British Columbia Data Catalogue (<https://catalogue.data.gov.bc.ca/>). Search catalogue data records based on keywords, data licence, sector, data format, and B.C. government organization. View metadata directly in R, download many data formats, and query 'geospatial' data available via the B.C. government Web Feature Service ('WFS') using 'dplyr' syntax.
Maintained by Andy Teucher. Last updated 3 days ago.
83 stars 10.36 score 186 scripts 4 dependents
elbersb
tidylog:Logging for 'dplyr' and 'tidyr' Functions
Provides feedback about 'dplyr' and 'tidyr' operations.
Maintained by Benjamin Elbers. Last updated 10 months ago.
dplyrtidyrtidyversewrapper-functions
593 stars 10.23 score 1.7k scripts
gaynorr
AlphaSimR:Breeding Program Simulations
The successor to the 'AlphaSim' software for breeding program simulation [Faux et al. (2016) <doi:10.3835/plantgenome2016.02.0013>]. Used for stochastic simulations of breeding programs to the level of DNA sequence for every individual. Contained is a wide range of functions for modeling common tasks in a breeding program, such as selection and crossing. These functions allow for constructing simulations of highly complex plant and animal breeding programs via scripting in the R software environment. Such simulations can be used to evaluate overall breeding program performance and conduct research into breeding program design, such as implementation of genomic selection. Included is the 'Markovian Coalescent Simulator' ('MaCS') for fast simulation of biallelic sequences according to a population demographic history [Chen et al. (2009) <doi:10.1101/gr.083634.108>].
Maintained by Chris Gaynor. Last updated 5 months ago.
breedinggenomicssimulationopenblascppopenmp
47 stars 10.22 score 534 scripts 2 dependentsbioc
MicrobiotaProcess:A comprehensive R package for managing and analyzing microbiome and other ecological data within the tidy framework
MicrobiotaProcess is an R package for analysis, visualization and biomarker discovery of microbial datasets. It introduces MPSE class, this make it more interoperable with the existing computing ecosystem. Moreover, it introduces a tidy microbiome data structure paradigm and analysis grammar. It provides a wide variety of microbiome data analysis procedures under the unified and common framework (tidy-like framework).
Maintained by Shuangbin Xu. Last updated 5 months ago.
visualizationmicrobiomesoftwaremultiplecomparisonfeatureextractionmicrobiome-analysismicrobiome-data
186 stars 9.70 score 126 scripts 1 dependentsbioc
tidybulk:Brings transcriptomics to the tidyverse
This is a collection of utility functions that allow to perform exploration of and calculations to RNA sequencing data, in a modular, pipe-friendly and tidy fashion.
Maintained by Stefano Mangiola. Last updated 11 days ago.
assaydomaininfrastructurernaseqdifferentialexpressiongeneexpressionnormalizationclusteringqualitycontrolsequencingtranscriptiontranscriptomicsbioconductorbulk-transcriptional-analysesdeseq2differential-expressionedgerensembl-idsentrezgene-symbolsgseamds-dimensionspcapiperedundancytibbletidytidy-datatidyversetranscriptstsne
171 stars 9.57 score 172 scripts 1 dependents
adibender
pammtools:Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis
The Piece-wise exponential (Additive Mixed) Model (PAMM; Bender and others (2018) <doi: 10.1177/1471082X17748083>) is a powerful model class for the analysis of survival (or time-to-event) data, based on Generalized Additive (Mixed) Models (GA(M)Ms). It offers intuitive specification and robust estimation of complex survival models with stratified baseline hazards, random effects, time-varying effects, time-dependent covariates and cumulative effects (Bender and others (2019)), as well as support for left-truncated data as well as competing risks, recurrent events and multi-state settings. pammtools provides tidy workflow for survival analysis with PAMMs, including data simulation, transformation and other functions for data preprocessing and model post-processing as well as visualization.
Maintained by Andreas Bender. Last updated 5 days ago.
additive-modelspammpammtoolspiece-wise-exponentialsurvival-analysis
48 stars 9.32 score 310 scripts 8 dependents
cmmr
rbiom:Read/Write, Analyze, and Visualize 'BIOM' Data
A toolkit for working with Biological Observation Matrix ('BIOM') files. Read/write all 'BIOM' formats. Compute rarefaction, alpha diversity, and beta diversity (including 'UniFrac'). Summarize counts by taxonomic level. Subset based on metadata. Generate visualizations and statistical analyses. CPU intensive operations are coded in C for speed.
Maintained by Daniel P. Smith. Last updated 11 days ago.
15 stars 9.07 score 117 scripts 6 dependents
bupaverse
bupaR:Business Process Analysis in R
Comprehensive Business Process Analysis toolkit. Creates S3-class for event log objects, and related handler functions. Imports related packages for filtering event data, computation of descriptive statistics, handling of 'Petri Net' objects and visualization of process maps. See also packages 'edeaR','processmapR', 'eventdataR' and 'processmonitR'.
Maintained by Gert Janssenswillen. Last updated 2 years ago.
57 stars 9.06 score 389 scripts 11 dependents
somalogic
SomaDataIO:Input/Output 'SomaScan' Data
Load and export 'SomaScan' data via the 'Standard BioTools, Inc.' structured text file called an ADAT ('*.adat'). For file format see <https://github.com/SomaLogic/SomaLogic-Data/blob/main/README.md>. The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.
Maintained by Caleb Scheidel. Last updated 2 months ago.
adatproteomicsproteomics-data-analysissomascan
26 stars 7.71 score 132 scripts
reconverse
incidence2:Compute, Handle and Plot Incidence of Dated Events
Provides functions and classes to compute, handle and visualise incidence from dated events for a defined time interval. Dates can be provided in various standard formats. The class 'incidence2' is used to store computed incidence and can be easily manipulated, subsetted, and plotted.
Maintained by Tim Taylor. Last updated 18 days ago.
17 stars 7.67 score 104 scripts 1 dependents
momx
Momocs:Morphometrics using R
The goal of 'Momocs' is to provide a complete, convenient, reproducible and open-source toolkit for 2D morphometrics. It includes most common 2D morphometrics approaches on outlines, open outlines, configurations of landmarks, traditional morphometrics, and facilities for data preparation, manipulation and visualization with a consistent grammar throughout. It allows reproducible, complex morphometrics analyses and other morphometrics approaches should be easy to plug in, or develop from, on top of this canvas.
Maintained by Vincent Bonhomme. Last updated 1 years ago.
51 stars 7.42 score 346 scripts
jakobbossek
ecr:Evolutionary Computation in R
Framework for building evolutionary algorithms for both single- and multi-objective continuous or discrete optimization problems. A set of predefined evolutionary building blocks and operators is included. Moreover, the user can easily set up custom objective functions, operators, building blocks and representations sticking to few conventions. The package allows both a black-box approach for standard tasks (plug-and-play style) and a much more flexible white-box approach where the evolutionary cycle is written by hand.
Maintained by Jakob Bossek. Last updated 2 years ago.
combinatorial-optimizationevolutionary-algorithmevolutionary-algorithmsevolutionary-strategygenetic-algorithm-frameworkmetaheuristicsmulti-objective-optimizationoptimizationoptimization-frameworkcpp
43 stars 7.36 score 89 scripts 2 dependentsthomasp85
particles:A Graph Based Particle Simulator Based on D3-Force
Simulating particle movement in 2D space has many application. The 'particles' package implements a particle simulator based on the ideas behind the 'd3-force' 'JavaScript' library. 'particles' implements all forces defined in 'd3-force' as well as others such as vector fields, traps, and attractors.
Maintained by Thomas Lin Pedersen. Last updated 4 months ago.
d3jsgraph-layoutnetworknetwork-visualizationparticlessimulationcpp
119 stars 7.19 score 43 scripts
strohne
volker:High-Level Functions for Tabulating, Charting and Reporting Survey Data
Craft polished tables and plots in Markdown reports. Simply choose whether to treat your data as counts or metrics, and the package will automatically generate well-designed default tables and plots for you. Boiled down to the basics, with labeling features and simple interactive reports. All functions are 'tidyverse' compatible.
Maintained by Jakob Jünger. Last updated 15 days ago.
5 stars 7.16 score 125 scripts
ycroissant
dfidx:Indexed Data Frames
Provides extended data frames, with a special data frame column which contains two indexes, with potentially a nesting structure.
Maintained by Yves Croissant. Last updated 7 months ago.
2 stars 6.91 score 44 scripts 18 dependents
statisfactions
simpr:Flexible 'Tidyverse'-Friendly Simulations
A general, 'tidyverse'-friendly framework for simulation studies, design analysis, and power analysis. Specify data generation, define varying parameters, generate data, fit models, and tidy model results in a single pipeline, without needing loops or custom functions.
Maintained by Ethan Brown. Last updated 9 months ago.
43 stars 6.89 score 30 scriptsbioc
proActiv:Estimate Promoter Activity from RNA-Seq data
Most human genes have multiple promoters that control the expression of different isoforms. The use of these alternative promoters enables the regulation of isoform expression pre-transcriptionally. Alternative promoters have been found to be important in a wide number of cell types and diseases. proActiv is an R package that enables the analysis of promoters from RNA-seq data. proActiv uses aligned reads as input, and generates counts and normalized promoter activity estimates for each annotated promoter. In particular, proActiv accepts junction files from TopHat2 or STAR or BAM files as inputs. These estimates can then be used to identify which promoter is active, which promoter is inactive, and which promoters change their activity across conditions. proActiv also allows visualization of promoter activity across conditions.
Maintained by Joseph Lee. Last updated 5 months ago.
rnaseqgeneexpressiontranscriptionalternativesplicinggeneregulationdifferentialsplicingfunctionalgenomicsepigeneticstranscriptomicspreprocessingalternative-promotersgenomicspromoter-activitypromoter-annotationrna-seq-data
51 stars 6.66 score 15 scripts
craddm
eegUtils:Utilities for Electroencephalographic (EEG) Analysis
Electroencephalography data processing and visualization tools. Includes import functions for 'BioSemi' (.BDF), 'Neuroscan' (.CNT), 'Brain Vision Analyzer' (.VHDR), 'EEGLAB' (.set) and 'Fieldtrip' (.mat). Many preprocessing functions such as referencing, epoching, filtering, and ICA are available. There are a variety of visualizations possible, including timecourse and topographical plotting.
Maintained by Matt Craddock. Last updated 5 months ago.
eegeeg-analysiseeg-dataeeg-signalseeg-signals-processingopenblascppopenmp
106 stars 6.54 score 82 scripts
stocnet
manynet:Many Ways to Make, Modify, Map, Mark, and Measure Myriad Networks
Many tools for making, modifying, mapping, marking, measuring, and motifs and memberships of many different types of networks. All functions operate with matrices, edge lists, and 'igraph', 'network', and 'tidygraph' objects, and on one-mode, two-mode (bipartite), and sometimes three-mode networks. The package includes functions for importing and exporting, creating and generating networks, modifying networks and node and tie attributes, and describing and visualizing networks with sensible defaults.
Maintained by James Hollway. Last updated 3 months ago.
diffusion-modelsgraphsnetwork-analysis
13 stars 6.41 score 35 scripts 1 dependents
mattheaphy
actxps:Create Actuarial Experience Studies: Prepare Data, Summarize Results, and Create Reports
Experience studies are used by actuaries to explore historical experience across blocks of business and to inform assumption setting activities. This package provides functions for preparing data, creating studies, visualizing results, and beginning assumption development. Experience study methods, including exposure calculations, are described in: Atkinson & McGarry (2016) "Experience Study Calculations" <https://www.soa.org/49378a/globalassets/assets/files/research/experience-study-calculations.pdf>. The limited fluctuation credibility method used by the 'exp_stats()' function is described in: Herzog (1999, ISBN:1-56698-374-6) "Introduction to Credibility Theory".
Maintained by Matt Heaphy. Last updated 3 months ago.
14 stars 6.38 score 23 scripts
hope-data-science
tidyft:Fast and Memory Efficient Data Operations in Tidy Syntax
Tidy syntax for 'data.table', using modification by reference whenever possible. This toolkit is designed for big data analysis in high-performance desktop or laptop computers. The syntax of the package is similar or identical to 'tidyverse'. It is user friendly, memory efficient and time saving. For more information, check its ancestor package 'tidyfst'.
Maintained by Tian-Yuan Huang. Last updated 6 months ago.
35 stars 6.25 score 34 scripts
pierreroudier
spectacles:Storing, Manipulating and Analysis Spectroscopy and Associated Data
Stores and eases the manipulation of spectra and associated data, with dedicated classes for spatial and soil-related data.
Maintained by Pierre Roudier. Last updated 2 years ago.
11 stars 6.17 score 45 scripts 1 dependents
jprybylski
xpose.xtras:Extra Functionality for the 'xpose' Package
Adding some at-present missing functionality, or functions unlikely to be added to the base 'xpose' package. This includes some diagnostic plots that have been missing in translation from 'xpose4', but also some useful features that truly extend the capabilities of what can be done with 'xpose'. These extensions include the concept of a set of 'xpose' objects, and diagnostics for likelihood-based models.
Maintained by John Prybylski. Last updated 4 months ago.
6.01 score 5 scriptsbioc
plyxp:Data masks for SummarizedExperiment enabling dplyr-like manipulation
The package provides `rlang` data masks for the SummarizedExperiment class. The enables the evaluation of unquoted expression in different contexts of the SummarizedExperiment object with optional access to other contexts. The goal for `plyxp` is for evaluation to feel like a data.frame object without ever needing to unwind to a rectangular data.frame.
Maintained by Justin Landis. Last updated 12 days ago.
annotationgenomeannotationtranscriptomics
4 stars 5.88 score 6 scripts
asardaes
table.express:Build 'data.table' Expressions with Data Manipulation Verbs
A specialization of 'dplyr' data manipulation verbs that parse and build expressions which are ultimately evaluated by 'data.table', letting it handle all optimizations. A set of additional verbs is also provided to facilitate some common operations on a subset of the data.
Maintained by Alexis Sarda-Espinosa. Last updated 2 years ago.
65 stars 5.81 score 8 scripts
ropensci
BaseSet:Working with Sets the Tidy Way
Implements a class and methods to work with sets, doing intersection, union, complementary sets, power sets, cartesian product and other set operations in a "tidy" way. These set operations are available for both classical sets and fuzzy sets. Import sets from several formats or from other several data structures.
Maintained by Lluís Revilla Sancho. Last updated 1 months ago.
bioconductorbioconductor-packagesets
11 stars 5.69 score 5 scripts
r-tidy-remote-sensing
tidyrgee:'tidyverse' Methods for 'Earth Engine'
Provides 'tidyverse' methods for wrangling and analyzing 'Earth Engine' <https://earthengine.google.com/> data. These methods help the user with filtering, joining and summarising 'Earth Engine' image collections.
Maintained by Zack Arno. Last updated 2 years ago.
48 stars 5.53 score 140 scripts
forestgeo
fgeo.tool:Import and Manipulate 'ForestGEO' Data
To help you access, transform, analyze, and visualize 'ForestGEO' data, we developed a collection of R packages (<https://forestgeo.github.io/fgeo/>). This package, in particular, helps you to easily import, filter, and modify 'ForestGEO' data. To learn more about 'ForestGEO' visit <https://forestgeo.si.edu/>.
Maintained by Mauro Lepore. Last updated 3 years ago.
dynamicsecologyfgeoforestgeomiscelaneastoolstreeutils
2 stars 4.86 score 27 scripts 3 dependents
korap
RKorAPClient:'KorAP' Web Service Client Package
A client package that makes the 'KorAP' web service API accessible from R. The corpus analysis platform 'KorAP' has been developed as a scientific tool to make potentially large, stratified and multiply annotated corpora, such as the 'German Reference Corpus DeReKo' or the 'Corpus of the Contemporary Romanian Language CoRoLa', accessible for linguists to let them verify hypotheses and to find interesting patterns in real language use. The 'RKorAPClient' package provides access to 'KorAP' and the corpora behind it for user-created R code, as a programmatic alternative to the 'KorAP' web user-interface. You can learn more about 'KorAP' and use it directly on 'DeReKo' at <https://korap.ids-mannheim.de/>.
Maintained by Marc Kupietz. Last updated 28 days ago.
6 stars 4.81 score 30 scriptsbioc
plyinteractions:Extending tidy verbs to genomic interactions
Operate on `GInteractions` objects as tabular data using `dplyr`-like verbs. The functions and methods in `plyinteractions` provide a grammatical approach to manipulate `GInteractions`, to facilitate their integration in genomic analysis workflows.
Maintained by Jacques Serizay. Last updated 5 months ago.
4.75 score 14 scriptsropensci
popler:Popler R Package
Browse and query the popler database.
Maintained by Compagnoni Aldo. Last updated 5 years ago.
7 stars 3.82 score 47 scripts
poissonconsulting
mcmcdata:Manipulate MCMC Samples and Data Frames
Manipulates Monte Carlo Markov Chain samples and associated data frames.
Maintained by Joe Thorley. Last updated 2 months ago.
1 stars 3.56 score 4 scripts 4 dependents
r-forge
pems.utils:Portable Emissions (and Other Mobile) Measurement System Utilities
Utility functions for the handling, analysis and visualisation of data from portable emissions measurement systems ('PEMS') and other similar mobile activity monitoring devices. The package includes a dedicated 'pems' data class that manages many of the quality control, unit handling and data archiving issues that can hinder efforts to standardise 'PEMS' research.
Maintained by Karl Ropkins. Last updated 3 months ago.
3.06 score 19 scripts
