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juba
rainette:The Reinert Method for Textual Data Clustering
An R implementation of the Reinert text clustering method. For more details about the algorithm see the included vignettes or Reinert (1990) <doi:10.1177/075910639002600103>.
Maintained by Julien Barnier. Last updated 11 months ago.
text-analysistext-classificationcpp
55 stars 6.90 score 24 scripts
bioc
oncoscanR:Secondary analyses of CNV data (HRD and more)
The software uses the copy number segments from a text file and identifies all chromosome arms that are globally altered and computes various genome-wide scores. The following HRD scores (characteristic of BRCA-mutated cancers) are included: LST, HR-LOH, nLST and gLOH. the package is tailored for the ThermoFisher Oncoscan assay analyzed with their Chromosome Alteration Suite (ChAS) but can be adapted to any input.
Maintained by Yann Christinat. Last updated 5 months ago.
copynumbervariationmicroarraysoftware
2 stars 4.60 score 6 scripts