Showing 4 of total 4 results (show query)
bioc
limma:Linear Models for Microarray and Omics Data
Data analysis, linear models and differential expression for omics data.
Maintained by Gordon Smyth. Last updated 3 days ago.
exonarraygeneexpressiontranscriptionalternativesplicingdifferentialexpressiondifferentialsplicinggenesetenrichmentdataimportbayesianclusteringregressiontimecoursemicroarraymicrornaarraymrnamicroarrayonechannelproprietaryplatformstwochannelsequencingrnaseqbatcheffectmultiplecomparisonnormalizationpreprocessingqualitycontrolbiomedicalinformaticscellbiologycheminformaticsepigeneticsfunctionalgenomicsgeneticsimmunooncologymetabolomicsproteomicssystemsbiologytranscriptomics
13.84 score 16k scripts 587 dependentsbioc
beadarray:Quality assessment and low-level analysis for Illumina BeadArray data
The package is able to read bead-level data (raw TIFFs and text files) output by BeadScan as well as bead-summary data from BeadStudio. Methods for quality assessment and low-level analysis are provided.
Maintained by Mark Dunning. Last updated 5 months ago.
microarrayonechannelqualitycontrolpreprocessing
7.88 score 70 scripts 4 dependents
gdkrmr
coRanking:Co-Ranking Matrix
Calculates the co-ranking matrix to assess the quality of a dimensionality reduction.
Maintained by Guido Kraemer. Last updated 6 months ago.
dimensionality-reductionmanifold-learningqualitystatisticsunsupervised-learningcpp
9 stars 5.43 score 20 scripts 1 dependents
cran
hsphase:Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data
Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.
Maintained by Mohammad Ferdosi. Last updated 1 years ago.
1 stars 3.32 score 1 dependents